RNA–Protein interactions for RNA: ENST00000636390.1

CACNB4-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 4

Gene CACNB4, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-224ENST00000636390 AEBP2Q6ZN18 517 aaPredicted RBP27.09■■□□□ 1.93
CACNB4-224ENST00000636390 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
CACNB4-224ENST00000636390 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
CACNB4-224ENST00000636390 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
CACNB4-224ENST00000636390 FOXD1Q16676 465 aa21.64■■□□□ 1.05
CACNB4-224ENST00000636390 POTEDQ86YR6 584 aa20.63■□□□□ 0.89
CACNB4-224ENST00000636390 MSH5O43196 834 aa20.41■□□□□ 0.86
CACNB4-224ENST00000636390 PIAS4Q8N2W9 510 aaPredicted RBP20.11■□□□□ 0.81
CACNB4-224ENST00000636390 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
CACNB4-224ENST00000636390 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
CACNB4-224ENST00000636390 ADRA2BP18089 450 aa19.8■□□□□ 0.76
CACNB4-224ENST00000636390 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
CACNB4-224ENST00000636390 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
CACNB4-224ENST00000636390 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
CACNB4-224ENST00000636390 CACNB1Q02641 598 aaPredicted RBP17.74■□□□□ 0.43
CACNB4-224ENST00000636390 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.4
CACNB4-224ENST00000636390 PPP4R3CPQ6ZMV5 832 aa17.49■□□□□ 0.39
CACNB4-224ENST00000636390 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
CACNB4-224ENST00000636390 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
CACNB4-224ENST00000636390 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
CACNB4-224ENST00000636390 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
CACNB4-224ENST00000636390 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
CACNB4-224ENST00000636390 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
CACNB4-224ENST00000636390 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
CACNB4-224ENST00000636390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.251e-6■■■■□ 21.9
CACNB4-224ENST00000636390 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
CACNB4-224ENST00000636390 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
CACNB4-224ENST00000636390 DSG3P32926 999 aa16.13■□□□□ 0.17
CACNB4-224ENST00000636390 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
CACNB4-224ENST00000636390 CAPN15O75808 1086 aa16.09■□□□□ 0.17
CACNB4-224ENST00000636390 POTEHQ6S545 545 aa16.08■□□□□ 0.16
CACNB4-224ENST00000636390 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
CACNB4-224ENST00000636390 KCNA4P22459 653 aa15.77■□□□□ 0.12
CACNB4-224ENST00000636390 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
CACNB4-224ENST00000636390 APLP2Q06481 763 aa15.73■□□□□ 0.11
CACNB4-224ENST00000636390 ZNF219Q9P2Y4 722 aaPredicted RBP15.72■□□□□ 0.11
CACNB4-224ENST00000636390 ABCB7O75027 752 aa15.7■□□□□ 0.1
CACNB4-224ENST00000636390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
CACNB4-224ENST00000636390 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
CACNB4-224ENST00000636390 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
CACNB4-224ENST00000636390 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
CACNB4-224ENST00000636390 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
CACNB4-224ENST00000636390 CHRDL2Q6WN34 429 aa15.23■□□□□ 0.03
CACNB4-224ENST00000636390 POLA2Q14181 598 aa15.22■□□□□ 0.03
CACNB4-224ENST00000636390 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
CACNB4-224ENST00000636390 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
CACNB4-224ENST00000636390 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
CACNB4-224ENST00000636390 SP7Q8TDD2 431 aaPredicted RBP14.88□□□□□ -0.03
CACNB4-224ENST00000636390 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
CACNB4-224ENST00000636390 REM2Q8IYK8 340 aaPredicted RBP14.81□□□□□ -0.04
CACNB4-224ENST00000636390 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
CACNB4-224ENST00000636390 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
CACNB4-224ENST00000636390 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
CACNB4-224ENST00000636390 PITPNM1O00562 1244 aa14.68□□□□□ -0.06
CACNB4-224ENST00000636390 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
CACNB4-224ENST00000636390 HAX1O00165 279 aa14.57□□□□□ -0.08
CACNB4-224ENST00000636390 ZBTB22O15209 634 aa14.52□□□□□ -0.09
CACNB4-224ENST00000636390 NISCHQ9Y2I1 1504 aa14.5□□□□□ -0.09
CACNB4-224ENST00000636390 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
CACNB4-224ENST00000636390 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
CACNB4-224ENST00000636390 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
CACNB4-224ENST00000636390 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
CACNB4-224ENST00000636390 EVX2Q03828 476 aa14.4□□□□□ -0.1
CACNB4-224ENST00000636390 FBLN2P98095 1184 aa14.34□□□□□ -0.11
CACNB4-224ENST00000636390 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
CACNB4-224ENST00000636390 SPDYE1Q8NFV5 336 aaPredicted RBP14.25□□□□□ -0.13
CACNB4-224ENST00000636390 MKRN4PQ13434 485 aaPredicted RBP14.23□□□□□ -0.13
CACNB4-224ENST00000636390 CLEC11AQ9Y240 323 aa14.22□□□□□ -0.13
CACNB4-224ENST00000636390 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
CACNB4-224ENST00000636390 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
CACNB4-224ENST00000636390 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
CACNB4-224ENST00000636390 GABBR2O75899 941 aa14.05□□□□□ -0.16
CACNB4-224ENST00000636390 CHADLQ6NUI6 762 aa14.01□□□□□ -0.17
CACNB4-224ENST00000636390 LHX8Q68G74 356 aa13.93□□□□□ -0.18
CACNB4-224ENST00000636390 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
CACNB4-224ENST00000636390 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
CACNB4-224ENST00000636390 CD44P16070 742 aaKnown RBP13.8□□□□□ -0.2
CACNB4-224ENST00000636390 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
CACNB4-224ENST00000636390 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
CACNB4-224ENST00000636390 ABCC9O60706 1549 aa13.69□□□□□ -0.22
CACNB4-224ENST00000636390 CLCN6P51797 869 aa13.68□□□□□ -0.22
CACNB4-224ENST00000636390 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
CACNB4-224ENST00000636390 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
CACNB4-224ENST00000636390 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
CACNB4-224ENST00000636390 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
CACNB4-224ENST00000636390 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.25
CACNB4-224ENST00000636390 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
CACNB4-224ENST00000636390 GALR2O43603 387 aaPredicted RBP13.44□□□□□ -0.26
CACNB4-224ENST00000636390 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
CACNB4-224ENST00000636390 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
CACNB4-224ENST00000636390 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
CACNB4-224ENST00000636390 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
CACNB4-224ENST00000636390 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
CACNB4-224ENST00000636390 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
CACNB4-224ENST00000636390 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
CACNB4-224ENST00000636390 MNX1P50219 401 aaPredicted RBP13.26□□□□□ -0.29
CACNB4-224ENST00000636390 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNB4-224ENST00000636390 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
CACNB4-224ENST00000636390 POTEMA6NI47 508 aa13.14□□□□□ -0.31
CACNB4-224ENST00000636390 ASTLQ6HA08 431 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms