RNA–Protein interactions for RNA: ENST00000635033.1

ATP2B1-211, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 5

Gene ATP2B1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-211ENST00000635033 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
ATP2B1-211ENST00000635033 CHIC1Q5VXU3 224 aa28.54■■■□□ 2.16
ATP2B1-211ENST00000635033 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
ATP2B1-211ENST00000635033 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
ATP2B1-211ENST00000635033 PLPPR3Q6T4P5 718 aa23.49■■□□□ 1.35
ATP2B1-211ENST00000635033 FOXD1Q16676 465 aa22.3■■□□□ 1.16
ATP2B1-211ENST00000635033 ADRA2BP18089 450 aa22.03■■□□□ 1.12
ATP2B1-211ENST00000635033 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
ATP2B1-211ENST00000635033 PIAS4Q8N2W9 510 aaPredicted RBP21.24■□□□□ 0.99
ATP2B1-211ENST00000635033 KCNA4P22459 653 aa21.1■□□□□ 0.97
ATP2B1-211ENST00000635033 PPP4R3CPQ6ZMV5 832 aa20.78■□□□□ 0.92
ATP2B1-211ENST00000635033 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
ATP2B1-211ENST00000635033 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
ATP2B1-211ENST00000635033 MSH5O43196 834 aa20.31■□□□□ 0.84
ATP2B1-211ENST00000635033 SLC4A1APQ9BWU0 796 aaKnown RBP20.22■□□□□ 0.83
ATP2B1-211ENST00000635033 NPM3O75607 178 aaKnown RBP20.14■□□□□ 0.81
ATP2B1-211ENST00000635033 SCAF1Q9H7N4 1312 aaKnown RBP20.13■□□□□ 0.81
ATP2B1-211ENST00000635033 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
ATP2B1-211ENST00000635033 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
ATP2B1-211ENST00000635033 MAPK8IP2Q13387 824 aaPredicted RBP19.77■□□□□ 0.76
ATP2B1-211ENST00000635033 RNF216Q9NWF9 866 aaPredicted RBP19.48■□□□□ 0.71
ATP2B1-211ENST00000635033 ZBTB22O15209 634 aa19.42■□□□□ 0.7
ATP2B1-211ENST00000635033 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
ATP2B1-211ENST00000635033 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
ATP2B1-211ENST00000635033 FOXD4L1Q9NU39 408 aa19.22■□□□□ 0.67
ATP2B1-211ENST00000635033 HOXD11P31277 338 aaPredicted RBP19.21■□□□□ 0.67
ATP2B1-211ENST00000635033 SLC4A2P04920 1241 aa18.84■□□□□ 0.61
ATP2B1-211ENST00000635033 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
ATP2B1-211ENST00000635033 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
ATP2B1-211ENST00000635033 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
ATP2B1-211ENST00000635033 ATXN8OSP0DMR3 200 aa18.44■□□□□ 0.54
ATP2B1-211ENST00000635033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.53
ATP2B1-211ENST00000635033 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
ATP2B1-211ENST00000635033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
ATP2B1-211ENST00000635033 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
ATP2B1-211ENST00000635033 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
ATP2B1-211ENST00000635033 ATF5Q9Y2D1 282 aaPredicted RBP18.05■□□□□ 0.48
ATP2B1-211ENST00000635033 FKBP8Q14318 412 aa17.94■□□□□ 0.46
ATP2B1-211ENST00000635033 APLP2Q06481 763 aa17.78■□□□□ 0.44
ATP2B1-211ENST00000635033 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
ATP2B1-211ENST00000635033 AMER1Q5JTC6 1135 aaPredicted RBP17.53■□□□□ 0.4
ATP2B1-211ENST00000635033 RTN4Q9NQC3 1192 aaKnown RBP17.53■□□□□ 0.4
ATP2B1-211ENST00000635033 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
ATP2B1-211ENST00000635033 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
ATP2B1-211ENST00000635033 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
ATP2B1-211ENST00000635033 CAPN15O75808 1086 aa17.34■□□□□ 0.37
ATP2B1-211ENST00000635033 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
ATP2B1-211ENST00000635033 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
ATP2B1-211ENST00000635033 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
ATP2B1-211ENST00000635033 FBLN2P98095 1184 aa17.27■□□□□ 0.35
ATP2B1-211ENST00000635033 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
ATP2B1-211ENST00000635033 POLA2Q14181 598 aa17.26■□□□□ 0.35
ATP2B1-211ENST00000635033 ABCB7O75027 752 aa17.08■□□□□ 0.32
ATP2B1-211ENST00000635033 FBXO3Q9UK99 471 aa17.08■□□□□ 0.32
ATP2B1-211ENST00000635033 ZBTB12Q9Y330 459 aaPredicted RBP17.03■□□□□ 0.32
ATP2B1-211ENST00000635033 PROM2Q8N271 834 aa17.02■□□□□ 0.32
ATP2B1-211ENST00000635033 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
ATP2B1-211ENST00000635033 VASPP50552 380 aaPredicted RBP16.86■□□□□ 0.29
ATP2B1-211ENST00000635033 DSG3P32926 999 aa16.85■□□□□ 0.29
ATP2B1-211ENST00000635033 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
ATP2B1-211ENST00000635033 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
ATP2B1-211ENST00000635033 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
ATP2B1-211ENST00000635033 SPDYE2BA6NHP3 402 aa16.63■□□□□ 0.25
ATP2B1-211ENST00000635033 SPDYE6P0CI01 402 aa16.63■□□□□ 0.25
ATP2B1-211ENST00000635033 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
ATP2B1-211ENST00000635033 ABCC9O60706 1549 aa16.58■□□□□ 0.24
ATP2B1-211ENST00000635033 SSUH2Q9Y2M2 353 aa16.57■□□□□ 0.24
ATP2B1-211ENST00000635033 CCDC180Q9P1Z9 1646 aa16.55■□□□□ 0.24
ATP2B1-211ENST00000635033 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
ATP2B1-211ENST00000635033 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
ATP2B1-211ENST00000635033 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
ATP2B1-211ENST00000635033 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
ATP2B1-211ENST00000635033 PKD2Q13563 968 aa16.37■□□□□ 0.21
ATP2B1-211ENST00000635033 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
ATP2B1-211ENST00000635033 PLCD3Q8N3E9 789 aa16.36■□□□□ 0.21
ATP2B1-211ENST00000635033 SPOCK2Q92563 424 aa16.36■□□□□ 0.21
ATP2B1-211ENST00000635033 MIER1Q8N108 512 aa16.28■□□□□ 0.2
ATP2B1-211ENST00000635033 PLCB2Q00722 1185 aa16.19■□□□□ 0.18
ATP2B1-211ENST00000635033 ECM2O94769 699 aaPredicted RBP16.17■□□□□ 0.18
ATP2B1-211ENST00000635033 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
ATP2B1-211ENST00000635033 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
ATP2B1-211ENST00000635033 RBM42Q9BTD8 480 aaKnown RBP16.06■□□□□ 0.16
ATP2B1-211ENST00000635033 CIZ1Q9ULV3 898 aaPredicted RBP16.01■□□□□ 0.15
ATP2B1-211ENST00000635033 HAP1P54257 671 aaPredicted RBP16■□□□□ 0.15
ATP2B1-211ENST00000635033 SPDYE1Q8NFV5 336 aaPredicted RBP15.99■□□□□ 0.15
ATP2B1-211ENST00000635033 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
ATP2B1-211ENST00000635033 RGL2O15211 777 aa15.98■□□□□ 0.15
ATP2B1-211ENST00000635033 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.9■□□□□ 0.14
ATP2B1-211ENST00000635033 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
ATP2B1-211ENST00000635033 BBXQ8WY36 941 aaPredicted RBP15.89■□□□□ 0.13
ATP2B1-211ENST00000635033 NPM1P06748 294 aaKnown RBP eCLIP15.88■□□□□ 0.13
ATP2B1-211ENST00000635033 REM2Q8IYK8 340 aaPredicted RBP15.84■□□□□ 0.13
ATP2B1-211ENST00000635033 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
ATP2B1-211ENST00000635033 PRR29P0C7W0 189 aa15.83■□□□□ 0.12
ATP2B1-211ENST00000635033 GSE1Q14687 1217 aa15.8■□□□□ 0.12
ATP2B1-211ENST00000635033 NUBP1P53384 320 aa15.78■□□□□ 0.12
ATP2B1-211ENST00000635033 PAXIP1Q6ZW49 1069 aaPredicted RBP15.78■□□□□ 0.12
ATP2B1-211ENST00000635033 CREBZFQ9NS37 354 aa15.77■□□□□ 0.12
ATP2B1-211ENST00000635033 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
ATP2B1-211ENST00000635033 CFAP44Q96MT7 982 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms