RNA–Protein interactions for RNA: ENST00000625063.3

ATRX-219, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-219ENST00000625063 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
ATRX-219ENST00000625063 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
ATRX-219ENST00000625063 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
ATRX-219ENST00000625063 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
ATRX-219ENST00000625063 FOXD1Q16676 465 aa20.36■□□□□ 0.85
ATRX-219ENST00000625063 PLPPR3Q6T4P5 718 aa19.88■□□□□ 0.77
ATRX-219ENST00000625063 POTEDQ86YR6 584 aa19.73■□□□□ 0.75
ATRX-219ENST00000625063 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
ATRX-219ENST00000625063 ADRA2BP18089 450 aa19.29■□□□□ 0.68
ATRX-219ENST00000625063 MSH5O43196 834 aa19.24■□□□□ 0.67
ATRX-219ENST00000625063 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
ATRX-219ENST00000625063 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
ATRX-219ENST00000625063 PPP4R3CPQ6ZMV5 832 aa17.52■□□□□ 0.4
ATRX-219ENST00000625063 SCAF1Q9H7N4 1312 aaKnown RBP17.5■□□□□ 0.39
ATRX-219ENST00000625063 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
ATRX-219ENST00000625063 CNKSR2Q8WXI2 1034 aa17.06■□□□□ 0.32
ATRX-219ENST00000625063 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
ATRX-219ENST00000625063 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
ATRX-219ENST00000625063 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
ATRX-219ENST00000625063 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
ATRX-219ENST00000625063 KCNA4P22459 653 aa16.78■□□□□ 0.28
ATRX-219ENST00000625063 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
ATRX-219ENST00000625063 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
ATRX-219ENST00000625063 RNF39Q9H2S5 420 aa16.39■□□□□ 0.21
ATRX-219ENST00000625063 DNAJC5BQ9UF47 199 aa16.18■□□□□ 0.18
ATRX-219ENST00000625063 C1QBPQ07021 282 aaKnown RBP16.09■□□□□ 0.17
ATRX-219ENST00000625063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.165e-7■□□□□ 11.2
ATRX-219ENST00000625063 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
ATRX-219ENST00000625063 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
ATRX-219ENST00000625063 U3KPZ7 1027 aaPredicted RBP15.81■□□□□ 0.12
ATRX-219ENST00000625063 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
ATRX-219ENST00000625063 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
ATRX-219ENST00000625063 ZBTB22O15209 634 aa15.46■□□□□ 0.07
ATRX-219ENST00000625063 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
ATRX-219ENST00000625063 CAPN15O75808 1086 aa15.41■□□□□ 0.06
ATRX-219ENST00000625063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
ATRX-219ENST00000625063 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
ATRX-219ENST00000625063 POTEHQ6S545 545 aa15.35■□□□□ 0.05
ATRX-219ENST00000625063 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
ATRX-219ENST00000625063 APLP2Q06481 763 aa15.28■□□□□ 0.04
ATRX-219ENST00000625063 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
ATRX-219ENST00000625063 DSG3P32926 999 aa15.22■□□□□ 0.03
ATRX-219ENST00000625063 ZNF219Q9P2Y4 722 aaPredicted RBP15.18■□□□□ 0.02
ATRX-219ENST00000625063 ABCB7O75027 752 aa15.13■□□□□ 0.01
ATRX-219ENST00000625063 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
ATRX-219ENST00000625063 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
ATRX-219ENST00000625063 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
ATRX-219ENST00000625063 POLA2Q14181 598 aa14.93□□□□□ -0.02
ATRX-219ENST00000625063 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
ATRX-219ENST00000625063 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
ATRX-219ENST00000625063 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
ATRX-219ENST00000625063 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
ATRX-219ENST00000625063 MKRN4PQ13434 485 aaPredicted RBP14.44□□□□□ -0.1
ATRX-219ENST00000625063 FBLN2P98095 1184 aa14.41□□□□□ -0.1
ATRX-219ENST00000625063 CHRDL2Q6WN34 429 aa14.39□□□□□ -0.11
ATRX-219ENST00000625063 NISCHQ9Y2I1 1504 aa14.22□□□□□ -0.13
ATRX-219ENST00000625063 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
ATRX-219ENST00000625063 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
ATRX-219ENST00000625063 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
ATRX-219ENST00000625063 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
ATRX-219ENST00000625063 SP7Q8TDD2 431 aaPredicted RBP14.14□□□□□ -0.15
ATRX-219ENST00000625063 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
ATRX-219ENST00000625063 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
ATRX-219ENST00000625063 SSUH2Q9Y2M2 353 aa14.07□□□□□ -0.16
ATRX-219ENST00000625063 PITPNM1O00562 1244 aa14□□□□□ -0.17
ATRX-219ENST00000625063 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
ATRX-219ENST00000625063 PIP4P2Q8N4L2 257 aa13.94□□□□□ -0.18
ATRX-219ENST00000625063 SPDYE4A6NLX3 237 aa13.91□□□□□ -0.18
ATRX-219ENST00000625063 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
ATRX-219ENST00000625063 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
ATRX-219ENST00000625063 HAX1O00165 279 aa13.83□□□□□ -0.2
ATRX-219ENST00000625063 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
ATRX-219ENST00000625063 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
ATRX-219ENST00000625063 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
ATRX-219ENST00000625063 FKBP8Q14318 412 aa13.63□□□□□ -0.23
ATRX-219ENST00000625063 EVX2Q03828 476 aa13.62□□□□□ -0.23
ATRX-219ENST00000625063 PROM2Q8N271 834 aa13.61□□□□□ -0.23
ATRX-219ENST00000625063 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
ATRX-219ENST00000625063 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
ATRX-219ENST00000625063 ABCC9O60706 1549 aa13.49□□□□□ -0.25
ATRX-219ENST00000625063 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
ATRX-219ENST00000625063 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
ATRX-219ENST00000625063 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
ATRX-219ENST00000625063 GABBR2O75899 941 aa13.28□□□□□ -0.28
ATRX-219ENST00000625063 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
ATRX-219ENST00000625063 LHX8Q68G74 356 aa13.25□□□□□ -0.29
ATRX-219ENST00000625063 MIER1Q8N108 512 aa13.22□□□□□ -0.29
ATRX-219ENST00000625063 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.29
ATRX-219ENST00000625063 PLCD3Q8N3E9 789 aa13.16□□□□□ -0.3
ATRX-219ENST00000625063 FBXO3Q9UK99 471 aa13.14□□□□□ -0.31
ATRX-219ENST00000625063 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
ATRX-219ENST00000625063 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
ATRX-219ENST00000625063 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
ATRX-219ENST00000625063 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
ATRX-219ENST00000625063 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
ATRX-219ENST00000625063 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
ATRX-219ENST00000625063 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
ATRX-219ENST00000625063 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
ATRX-219ENST00000625063 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
ATRX-219ENST00000625063 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms