RNA–Protein interactions for RNA: ENST00000613349.4

BNC2-213, Transcript of basonuclin 2, humanhuman

TSL 1 (best)

Gene BNC2, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNC2-213ENST00000613349 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
BNC2-213ENST00000613349 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
BNC2-213ENST00000613349 PHF23Q9BUL5 403 aaPredicted RBP18.9■□□□□ 0.62
BNC2-213ENST00000613349 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
BNC2-213ENST00000613349 FOXD1Q16676 465 aa17.59■□□□□ 0.41
BNC2-213ENST00000613349 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
BNC2-213ENST00000613349 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
BNC2-213ENST00000613349 ADRA2BP18089 450 aa16.68■□□□□ 0.26
BNC2-213ENST00000613349 PIAS4Q8N2W9 510 aaPredicted RBP16.46■□□□□ 0.23
BNC2-213ENST00000613349 MSH5O43196 834 aa16.23■□□□□ 0.19
BNC2-213ENST00000613349 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
BNC2-213ENST00000613349 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
BNC2-213ENST00000613349 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
BNC2-213ENST00000613349 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
BNC2-213ENST00000613349 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
BNC2-213ENST00000613349 DMRT2Q9Y5R5 561 aa15.04■□□□□ -0
BNC2-213ENST00000613349 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
BNC2-213ENST00000613349 HOXD11P31277 338 aaPredicted RBP14.63□□□□□ -0.07
BNC2-213ENST00000613349 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
BNC2-213ENST00000613349 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
BNC2-213ENST00000613349 KCNA4P22459 653 aa14.57□□□□□ -0.08
BNC2-213ENST00000613349 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
BNC2-213ENST00000613349 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
BNC2-213ENST00000613349 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
BNC2-213ENST00000613349 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
BNC2-213ENST00000613349 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
BNC2-213ENST00000613349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
BNC2-213ENST00000613349 SLC4A2P04920 1241 aa13.82□□□□□ -0.2
BNC2-213ENST00000613349 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
BNC2-213ENST00000613349 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
BNC2-213ENST00000613349 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
BNC2-213ENST00000613349 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
BNC2-213ENST00000613349 ZBTB22O15209 634 aa13.47□□□□□ -0.25
BNC2-213ENST00000613349 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
BNC2-213ENST00000613349 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
BNC2-213ENST00000613349 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
BNC2-213ENST00000613349 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
BNC2-213ENST00000613349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
BNC2-213ENST00000613349 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
BNC2-213ENST00000613349 ABCC9O60706 1549 aa13.29□□□□□ -0.28
BNC2-213ENST00000613349 SAMD1Q6SPF0 538 aaPredicted RBP13.27□□□□□ -0.29
BNC2-213ENST00000613349 CAPN15O75808 1086 aa13.26□□□□□ -0.29
BNC2-213ENST00000613349 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
BNC2-213ENST00000613349 DSG3P32926 999 aa13.19□□□□□ -0.3
BNC2-213ENST00000613349 APLP2Q06481 763 aa13.18□□□□□ -0.3
BNC2-213ENST00000613349 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
BNC2-213ENST00000613349 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
BNC2-213ENST00000613349 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
BNC2-213ENST00000613349 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
BNC2-213ENST00000613349 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
BNC2-213ENST00000613349 ABCB7O75027 752 aa13.04□□□□□ -0.32
BNC2-213ENST00000613349 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
BNC2-213ENST00000613349 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
BNC2-213ENST00000613349 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
BNC2-213ENST00000613349 NACADO15069 1562 aa12.94□□□□□ -0.34
BNC2-213ENST00000613349 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
BNC2-213ENST00000613349 SCRIBQ14160 1630 aa12.9□□□□□ -0.34
BNC2-213ENST00000613349 POLA2Q14181 598 aa12.89□□□□□ -0.35
BNC2-213ENST00000613349 MYO15BQ96JP2 1530 aa12.87□□□□□ -0.35
BNC2-213ENST00000613349 UNC13AQ9UPW8 1703 aa12.83□□□□□ -0.36
BNC2-213ENST00000613349 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
BNC2-213ENST00000613349 MKRN4PQ13434 485 aaPredicted RBP12.55□□□□□ -0.4
BNC2-213ENST00000613349 OSCARQ8IYS5 282 aa12.51□□□□□ -0.41
BNC2-213ENST00000613349 BICRAQ9NZM4 1560 aa12.5□□□□□ -0.41
BNC2-213ENST00000613349 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
BNC2-213ENST00000613349 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
BNC2-213ENST00000613349 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.41
BNC2-213ENST00000613349 FBLN2P98095 1184 aa12.43□□□□□ -0.42
BNC2-213ENST00000613349 CECR2Q9BXF3 1484 aa12.36□□□□□ -0.43
BNC2-213ENST00000613349 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
BNC2-213ENST00000613349 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
BNC2-213ENST00000613349 WIZO95785 1651 aa12.29□□□□□ -0.44
BNC2-213ENST00000613349 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
BNC2-213ENST00000613349 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
BNC2-213ENST00000613349 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
BNC2-213ENST00000613349 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
BNC2-213ENST00000613349 BAZ1AQ9NRL2 1556 aaPredicted RBP12.27□□□□□ -0.44
BNC2-213ENST00000613349 RSF1Q96T23 1441 aaPredicted RBP12.24□□□□□ -0.45
BNC2-213ENST00000613349 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
BNC2-213ENST00000613349 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
BNC2-213ENST00000613349 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
BNC2-213ENST00000613349 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
BNC2-213ENST00000613349 CHRDL2Q6WN34 429 aa12.12□□□□□ -0.47
BNC2-213ENST00000613349 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
BNC2-213ENST00000613349 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
BNC2-213ENST00000613349 POTEHQ6S545 545 aa12.05□□□□□ -0.48
BNC2-213ENST00000613349 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
BNC2-213ENST00000613349 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
BNC2-213ENST00000613349 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
BNC2-213ENST00000613349 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
BNC2-213ENST00000613349 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
BNC2-213ENST00000613349 ATAD2BQ9ULI0 1458 aa12.01□□□□□ -0.49
BNC2-213ENST00000613349 SPDYE1Q8NFV5 336 aaPredicted RBP11.96□□□□□ -0.49
BNC2-213ENST00000613349 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
BNC2-213ENST00000613349 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
BNC2-213ENST00000613349 HMGXB3Q12766 1538 aa11.91□□□□□ -0.5
BNC2-213ENST00000613349 CCDC88BA6NC98 1476 aa11.91□□□□□ -0.5
BNC2-213ENST00000613349 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
BNC2-213ENST00000613349 PROM2Q8N271 834 aa11.9□□□□□ -0.5
BNC2-213ENST00000613349 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms