RNA–Protein interactions for RNA: ENST00000608240.1

LINC00484-207, long intergenic non-protein coding RNA 484, humanhuman

TSL 5

Gene LINC00484, Length 436 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00484-207ENST00000608240 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
LINC00484-207ENST00000608240 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
LINC00484-207ENST00000608240 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
LINC00484-207ENST00000608240 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
LINC00484-207ENST00000608240 FOXD1Q16676 465 aa19.54■□□□□ 0.72
LINC00484-207ENST00000608240 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
LINC00484-207ENST00000608240 MSH5O43196 834 aa18.39■□□□□ 0.53
LINC00484-207ENST00000608240 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
LINC00484-207ENST00000608240 ADRA2BP18089 450 aa18.3■□□□□ 0.52
LINC00484-207ENST00000608240 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
LINC00484-207ENST00000608240 POTEDQ86YR6 584 aa17.75■□□□□ 0.43
LINC00484-207ENST00000608240 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
LINC00484-207ENST00000608240 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
LINC00484-207ENST00000608240 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
LINC00484-207ENST00000608240 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
LINC00484-207ENST00000608240 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
LINC00484-207ENST00000608240 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
LINC00484-207ENST00000608240 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
LINC00484-207ENST00000608240 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
LINC00484-207ENST00000608240 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
LINC00484-207ENST00000608240 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
LINC00484-207ENST00000608240 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
LINC00484-207ENST00000608240 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
LINC00484-207ENST00000608240 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
LINC00484-207ENST00000608240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
LINC00484-207ENST00000608240 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
LINC00484-207ENST00000608240 KCNA4P22459 653 aa15.44■□□□□ 0.06
LINC00484-207ENST00000608240 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
LINC00484-207ENST00000608240 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
LINC00484-207ENST00000608240 CAPN15O75808 1086 aa14.87□□□□□ -0.03
LINC00484-207ENST00000608240 APLP2Q06481 763 aa14.85□□□□□ -0.03
LINC00484-207ENST00000608240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
LINC00484-207ENST00000608240 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
LINC00484-207ENST00000608240 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
LINC00484-207ENST00000608240 SAMD1Q6SPF0 538 aaPredicted RBP14.69□□□□□ -0.06
LINC00484-207ENST00000608240 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
LINC00484-207ENST00000608240 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
LINC00484-207ENST00000608240 DSG3P32926 999 aa14.64□□□□□ -0.07
LINC00484-207ENST00000608240 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
LINC00484-207ENST00000608240 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
LINC00484-207ENST00000608240 ABCB7O75027 752 aa14.46□□□□□ -0.09
LINC00484-207ENST00000608240 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
LINC00484-207ENST00000608240 POLA2Q14181 598 aa14.24□□□□□ -0.13
LINC00484-207ENST00000608240 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
LINC00484-207ENST00000608240 ZBTB22O15209 634 aa14.1□□□□□ -0.15
LINC00484-207ENST00000608240 ATF5Q9Y2D1 282 aaPredicted RBP14.08□□□□□ -0.16
LINC00484-207ENST00000608240 NISCHQ9Y2I1 1504 aa14.08□□□□□ -0.16
LINC00484-207ENST00000608240 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
LINC00484-207ENST00000608240 ATXN8OSP0DMR3 200 aa14.02□□□□□ -0.17
LINC00484-207ENST00000608240 POTEHQ6S545 545 aa13.91□□□□□ -0.18
LINC00484-207ENST00000608240 FBLN2P98095 1184 aa13.76□□□□□ -0.21
LINC00484-207ENST00000608240 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
LINC00484-207ENST00000608240 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
LINC00484-207ENST00000608240 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
LINC00484-207ENST00000608240 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
LINC00484-207ENST00000608240 EHMT2Q96KQ7 1210 aa13.59□□□□□ -0.23
LINC00484-207ENST00000608240 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
LINC00484-207ENST00000608240 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
LINC00484-207ENST00000608240 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
LINC00484-207ENST00000608240 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
LINC00484-207ENST00000608240 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
LINC00484-207ENST00000608240 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
LINC00484-207ENST00000608240 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
LINC00484-207ENST00000608240 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
LINC00484-207ENST00000608240 SPDYE1Q8NFV5 336 aaPredicted RBP13.33□□□□□ -0.28
LINC00484-207ENST00000608240 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
LINC00484-207ENST00000608240 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
LINC00484-207ENST00000608240 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC00484-207ENST00000608240 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00484-207ENST00000608240 HAX1O00165 279 aa13.19□□□□□ -0.3
LINC00484-207ENST00000608240 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
LINC00484-207ENST00000608240 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
LINC00484-207ENST00000608240 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
LINC00484-207ENST00000608240 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
LINC00484-207ENST00000608240 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
LINC00484-207ENST00000608240 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
LINC00484-207ENST00000608240 ABCC9O60706 1549 aa12.91□□□□□ -0.34
LINC00484-207ENST00000608240 C19orf67A6NJJ6 358 aa12.84□□□□□ -0.35
LINC00484-207ENST00000608240 EVX2Q03828 476 aa12.83□□□□□ -0.36
LINC00484-207ENST00000608240 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
LINC00484-207ENST00000608240 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
LINC00484-207ENST00000608240 CREBZFQ9NS37 354 aa12.68□□□□□ -0.38
LINC00484-207ENST00000608240 GABBR2O75899 941 aa12.65□□□□□ -0.38
LINC00484-207ENST00000608240 CCDC180Q9P1Z9 1646 aa12.65□□□□□ -0.38
LINC00484-207ENST00000608240 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00484-207ENST00000608240 CLCN6P51797 869 aa12.62□□□□□ -0.39
LINC00484-207ENST00000608240 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
LINC00484-207ENST00000608240 ZRANB1Q9UGI0 708 aa12.57□□□□□ -0.4
LINC00484-207ENST00000608240 PLEKHG5O94827 1062 aa12.56□□□□□ -0.4
LINC00484-207ENST00000608240 PROM2Q8N271 834 aa12.56□□□□□ -0.4
LINC00484-207ENST00000608240 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
LINC00484-207ENST00000608240 MIER1Q8N108 512 aa12.46□□□□□ -0.41
LINC00484-207ENST00000608240 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
LINC00484-207ENST00000608240 FKBP8Q14318 412 aa12.45□□□□□ -0.42
LINC00484-207ENST00000608240 MNX1P50219 401 aaPredicted RBP12.42□□□□□ -0.42
LINC00484-207ENST00000608240 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
LINC00484-207ENST00000608240 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
LINC00484-207ENST00000608240 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
LINC00484-207ENST00000608240 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
LINC00484-207ENST00000608240 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms