RNA–Protein interactions for RNA: ENST00000606855.1

LINC01184-211, Transcript of long intergenic non-protein coding RNA 1184, human

TSL 5

Gene LINC01184, Length 320 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01184-211	ENST00000606855	AEBP2	Q6ZN18	517 aa	Predicted RBP	25.42	■■□□□ 1.66
LINC01184-211	ENST00000606855	CHIC1	Q5VXU3	224 aa		24.01	■■□□□ 1.43
LINC01184-211	ENST00000606855	SENP3	Q9H4L4	574 aa	Predicted RBP	21.7	■■□□□ 1.06
LINC01184-211	ENST00000606855	PHF23	Q9BUL5	403 aa	Predicted RBP	21.39	■■□□□ 1.01
LINC01184-211	ENST00000606855	FOXD1	Q16676	465 aa		20.24	■□□□□ 0.83
LINC01184-211	ENST00000606855	PLPPR3	Q6T4P5	718 aa		19.12	■□□□□ 0.65
LINC01184-211	ENST00000606855	MSH5	O43196	834 aa		19	■□□□□ 0.63
LINC01184-211	ENST00000606855	PIAS4	Q8N2W9	510 aa	Predicted RBP	18.89	■□□□□ 0.61
LINC01184-211	ENST00000606855	PPP6R1	Q9UPN7	881 aa		18.82	■□□□□ 0.6
LINC01184-211	ENST00000606855	POTED	Q86YR6	584 aa		18.76	■□□□□ 0.59
LINC01184-211	ENST00000606855	ADRA2B	P18089	450 aa		18.75	■□□□□ 0.59
LINC01184-211	ENST00000606855	MAPK8IP2	Q13387	824 aa	Predicted RBP	17.26	■□□□□ 0.35
LINC01184-211	ENST00000606855	DMRT2	Q9Y5R5	561 aa		17.19	■□□□□ 0.34
LINC01184-211	ENST00000606855	SCAF1	Q9H7N4	1312 aa	Known RBP	17.16	■□□□□ 0.34
LINC01184-211	ENST00000606855	PPP4R3CP	Q6ZMV5	832 aa		16.74	■□□□□ 0.27
LINC01184-211	ENST00000606855	NISCH	Q9Y2I1	1504 aa		16.59	■□□□□ 0.25
LINC01184-211	ENST00000606855	DCAF8L1	A6NGE4	600 aa		16.5	■□□□□ 0.23
LINC01184-211	ENST00000606855	HOXD11	P31277	338 aa	Predicted RBP	16.5	■□□□□ 0.23
LINC01184-211	ENST00000606855	CNKSR2	Q8WXI2	1034 aa		16.46	■□□□□ 0.23
LINC01184-211	ENST00000606855	CACNB1	Q02641	598 aa	Predicted RBP	16.38	■□□□□ 0.21
LINC01184-211	ENST00000606855	RNF216	Q9NWF9	866 aa	Predicted RBP	16.34	■□□□□ 0.21
LINC01184-211	ENST00000606855	RNF39	Q9H2S5	420 aa		16.2	■□□□□ 0.18
LINC01184-211	ENST00000606855	NCBP3	Q53F19	620 aa	Known RBP	16.06	■□□□□ 0.16
LINC01184-211	ENST00000606855	C1QBP	Q07021	282 aa	Known RBP	15.95	■□□□□ 0.14
LINC01184-211	ENST00000606855	DNAJC5B	Q9UF47	199 aa		15.95	■□□□□ 0.14
LINC01184-211	ENST00000606855	NPM3	O75607	178 aa	Known RBP	15.83	■□□□□ 0.12
LINC01184-211	ENST00000606855	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	15.73	■□□□□ 0.11
LINC01184-211	ENST00000606855	KCNA4	P22459	653 aa		15.42	■□□□□ 0.06
LINC01184-211	ENST00000606855		U3KPZ7	1027 aa	Predicted RBP	15.39	■□□□□ 0.05
LINC01184-211	ENST00000606855	SPINK5	Q9NQ38	1064 aa	Predicted RBP	15.21	■□□□□ 0.03
LINC01184-211	ENST00000606855	CAPN15	O75808	1086 aa		15.19	■□□□□ 0.02
LINC01184-211	ENST00000606855	SLC4A2	P04920	1241 aa		15.16	■□□□□ 0.02
LINC01184-211	ENST00000606855	DSG3	P32926	999 aa		15.12	■□□□□ 0.01
LINC01184-211	ENST00000606855	APLP2	Q06481	763 aa		14.94	□□□□□ -0.02
LINC01184-211	ENST00000606855	TRH	P20396	242 aa	Predicted RBP	14.91	□□□□□ -0.02
LINC01184-211	ENST00000606855	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.9	□□□□□ -0.02
LINC01184-211	ENST00000606855	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.9	□□□□□ -0.02
LINC01184-211	ENST00000606855	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14.88	□□□□□ -0.03
LINC01184-211	ENST00000606855	ABCB7	O75027	752 aa		14.83	□□□□□ -0.04
LINC01184-211	ENST00000606855	SAMD1	Q6SPF0	538 aa	Predicted RBP	14.82	□□□□□ -0.04
LINC01184-211	ENST00000606855	POTEH	Q6S545	545 aa		14.68	□□□□□ -0.06
LINC01184-211	ENST00000606855	MYCN	P04198	464 aa	Predicted RBP	14.65	□□□□□ -0.06
LINC01184-211	ENST00000606855	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.53	□□□□□ -0.08
LINC01184-211	ENST00000606855	POLA2	Q14181	598 aa		14.47	□□□□□ -0.09
LINC01184-211	ENST00000606855	RBM42	Q9BTD8	480 aa	Known RBP	14.44	□□□□□ -0.1
LINC01184-211	ENST00000606855	FOXD4L1	Q9NU39	408 aa		14.44	□□□□□ -0.1
LINC01184-211	ENST00000606855	ATF5	Q9Y2D1	282 aa	Predicted RBP	14.32	□□□□□ -0.12
LINC01184-211	ENST00000606855	CCDC180	Q9P1Z9	1646 aa		14.3	□□□□□ -0.12
LINC01184-211	ENST00000606855	ZBTB22	O15209	634 aa		14.18	□□□□□ -0.14
LINC01184-211	ENST00000606855	CHRDL2	Q6WN34	429 aa		14.18	□□□□□ -0.14
LINC01184-211	ENST00000606855	ZBTB12	Q9Y330	459 aa	Predicted RBP	14.18	□□□□□ -0.14
LINC01184-211	ENST00000606855	AKT1S1	Q96B36	256 aa		14.07	□□□□□ -0.16
LINC01184-211	ENST00000606855	OSCAR	Q8IYS5	282 aa		14.04	□□□□□ -0.16
LINC01184-211	ENST00000606855	ATXN8OS	P0DMR3	200 aa		13.99	□□□□□ -0.17
LINC01184-211	ENST00000606855	REM2	Q8IYK8	340 aa	Predicted RBP	13.94	□□□□□ -0.18
LINC01184-211	ENST00000606855	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.92	□□□□□ -0.18
LINC01184-211	ENST00000606855	PITPNM1	O00562	1244 aa		13.81	□□□□□ -0.2
LINC01184-211	ENST00000606855	PIP4P2	Q8N4L2	257 aa		13.81	□□□□□ -0.2
LINC01184-211	ENST00000606855	DCAF1	Q9Y4B6	1507 aa		13.8	□□□□□ -0.2
LINC01184-211	ENST00000606855	FBLN2	P98095	1184 aa		13.77	□□□□□ -0.21
LINC01184-211	ENST00000606855	SPDYE2B	A6NHP3	402 aa		13.73	□□□□□ -0.21
LINC01184-211	ENST00000606855	SPDYE6	P0CI01	402 aa		13.73	□□□□□ -0.21
LINC01184-211	ENST00000606855	SPDYE2	Q495Y8	402 aa		13.73	□□□□□ -0.21
LINC01184-211	ENST00000606855	FXR2	P51116	673 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
LINC01184-211	ENST00000606855	SP7	Q8TDD2	431 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC01184-211	ENST00000606855	DCAF8L2	P0C7V8	631 aa		13.69	□□□□□ -0.22
LINC01184-211	ENST00000606855	MKRN4P	Q13434	485 aa	Predicted RBP	13.66	□□□□□ -0.22
LINC01184-211	ENST00000606855	MYO15B	Q96JP2	1530 aa		13.62	□□□□□ -0.23
LINC01184-211	ENST00000606855	HAX1	O00165	279 aa		13.59	□□□□□ -0.23
LINC01184-211	ENST00000606855	ZNF692	Q9BU19	519 aa	Predicted RBP	13.54	□□□□□ -0.24
LINC01184-211	ENST00000606855	SSUH2	Q9Y2M2	353 aa		13.54	□□□□□ -0.24
LINC01184-211	ENST00000606855	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.52	□□□□□ -0.25
LINC01184-211	ENST00000606855	SHROOM4	Q9ULL8	1493 aa		13.5	□□□□□ -0.25
LINC01184-211	ENST00000606855	CLEC11A	Q9Y240	323 aa		13.5	□□□□□ -0.25
LINC01184-211	ENST00000606855	PRKAR2A	P13861	404 aa	Known RBP	13.44	□□□□□ -0.26
LINC01184-211	ENST00000606855	EVX2	Q03828	476 aa		13.41	□□□□□ -0.26
LINC01184-211	ENST00000606855	NACAD	O15069	1562 aa		13.41	□□□□□ -0.26
LINC01184-211	ENST00000606855	ABCC9	O60706	1549 aa		13.39	□□□□□ -0.27
LINC01184-211	ENST00000606855	CSRNP3	Q8WYN3	585 aa		13.39	□□□□□ -0.27
LINC01184-211	ENST00000606855	PABPN1	Q86U42	306 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
LINC01184-211	ENST00000606855	C19orf67	A6NJJ6	358 aa		13.27	□□□□□ -0.29
LINC01184-211	ENST00000606855	CHADL	Q6NUI6	762 aa		13.27	□□□□□ -0.29
LINC01184-211	ENST00000606855	PRR29	P0C7W0	189 aa		13.26	□□□□□ -0.29
LINC01184-211	ENST00000606855	RB1CC1	Q8TDY2	1594 aa		13.2	□□□□□ -0.3
LINC01184-211	ENST00000606855	SUPT5H	O00267	1087 aa	Known RBP	13.19	□□□□□ -0.3
LINC01184-211	ENST00000606855	EHMT2	Q96KQ7	1210 aa		13.18	□□□□□ -0.3
LINC01184-211	ENST00000606855	GABBR2	O75899	941 aa		13.1	□□□□□ -0.31
LINC01184-211	ENST00000606855	SCRIB	Q14160	1630 aa		13.08	□□□□□ -0.32
LINC01184-211	ENST00000606855	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.05	□□□□□ -0.32
LINC01184-211	ENST00000606855	CD44	P16070	742 aa	Known RBP	13.02	□□□□□ -0.33
LINC01184-211	ENST00000606855	SPDYE4	A6NLX3	237 aa		12.95	□□□□□ -0.34
LINC01184-211	ENST00000606855	RSF1	Q96T23	1441 aa	Predicted RBP	12.95	□□□□□ -0.34
LINC01184-211	ENST00000606855	STAG3	Q9UJ98	1225 aa		12.94	□□□□□ -0.34
LINC01184-211	ENST00000606855	CREBZF	Q9NS37	354 aa		12.9	□□□□□ -0.34
LINC01184-211	ENST00000606855	CLCN6	P51797	869 aa		12.84	□□□□□ -0.35
LINC01184-211	ENST00000606855	LHX8	Q68G74	356 aa		12.84	□□□□□ -0.35
LINC01184-211	ENST00000606855	POTEI	P0CG38	1075 aa		12.82	□□□□□ -0.36
LINC01184-211	ENST00000606855	CECR2	Q9BXF3	1484 aa		12.82	□□□□□ -0.36
LINC01184-211	ENST00000606855	ZNF579	Q8NAF0	562 aa	Known RBP	12.81	□□□□□ -0.36
LINC01184-211	ENST00000606855	ZRANB1	Q9UGI0	708 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms