RNA–Protein interactions for RNA: ENST00000604009.5

NAMA-202, Transcript of non-protein coding RNA, associated with MAP kinase pathway and growth arrest, humanhuman

TSL 1 (best)

Gene NAMA, Length 701 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAMA-202ENST00000604009 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
NAMA-202ENST00000604009 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
NAMA-202ENST00000604009 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
NAMA-202ENST00000604009 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
NAMA-202ENST00000604009 FOXD1Q16676 465 aa19.9■□□□□ 0.78
NAMA-202ENST00000604009 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
NAMA-202ENST00000604009 MSH5O43196 834 aa18.64■□□□□ 0.57
NAMA-202ENST00000604009 PIAS4Q8N2W9 510 aaPredicted RBP18.61■□□□□ 0.57
NAMA-202ENST00000604009 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
NAMA-202ENST00000604009 ADRA2BP18089 450 aa18.56■□□□□ 0.56
NAMA-202ENST00000604009 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
NAMA-202ENST00000604009 MAPK8IP2Q13387 824 aaPredicted RBP17.07■□□□□ 0.32
NAMA-202ENST00000604009 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
NAMA-202ENST00000604009 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
NAMA-202ENST00000604009 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
NAMA-202ENST00000604009 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
NAMA-202ENST00000604009 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
NAMA-202ENST00000604009 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
NAMA-202ENST00000604009 RNF216Q9NWF9 866 aaPredicted RBP16.14■□□□□ 0.17
NAMA-202ENST00000604009 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
NAMA-202ENST00000604009 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
NAMA-202ENST00000604009 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
NAMA-202ENST00000604009 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
NAMA-202ENST00000604009 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
NAMA-202ENST00000604009 C1QBPQ07021 282 aaKnown RBP15.67■□□□□ 0.1
NAMA-202ENST00000604009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
NAMA-202ENST00000604009 KCNA4P22459 653 aa15.37■□□□□ 0.05
NAMA-202ENST00000604009 U3KPZ7 1027 aaPredicted RBP15.16■□□□□ 0.02
NAMA-202ENST00000604009 CAPN15O75808 1086 aa15.03■□□□□ -0
NAMA-202ENST00000604009 SPINK5Q9NQ38 1064 aaPredicted RBP15□□□□□ -0.01
NAMA-202ENST00000604009 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
NAMA-202ENST00000604009 DSG3P32926 999 aa14.88□□□□□ -0.03
NAMA-202ENST00000604009 APLP2Q06481 763 aa14.82□□□□□ -0.04
NAMA-202ENST00000604009 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
NAMA-202ENST00000604009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
NAMA-202ENST00000604009 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
NAMA-202ENST00000604009 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
NAMA-202ENST00000604009 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
NAMA-202ENST00000604009 ABCB7O75027 752 aa14.65□□□□□ -0.06
NAMA-202ENST00000604009 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
NAMA-202ENST00000604009 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
NAMA-202ENST00000604009 POLA2Q14181 598 aa14.36□□□□□ -0.11
NAMA-202ENST00000604009 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
NAMA-202ENST00000604009 POTEHQ6S545 545 aa14.32□□□□□ -0.12
NAMA-202ENST00000604009 RBM42Q9BTD8 480 aaKnown RBP14.21□□□□□ -0.13
NAMA-202ENST00000604009 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
NAMA-202ENST00000604009 ZBTB22O15209 634 aa14.09□□□□□ -0.15
NAMA-202ENST00000604009 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
NAMA-202ENST00000604009 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
NAMA-202ENST00000604009 ATXN8OSP0DMR3 200 aa13.91□□□□□ -0.18
NAMA-202ENST00000604009 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
NAMA-202ENST00000604009 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
NAMA-202ENST00000604009 REM2Q8IYK8 340 aaPredicted RBP13.76□□□□□ -0.21
NAMA-202ENST00000604009 FBLN2P98095 1184 aa13.7□□□□□ -0.22
NAMA-202ENST00000604009 SPDYE2BA6NHP3 402 aa13.58□□□□□ -0.24
NAMA-202ENST00000604009 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
NAMA-202ENST00000604009 SPDYE6P0CI01 402 aa13.58□□□□□ -0.24
NAMA-202ENST00000604009 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
NAMA-202ENST00000604009 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
NAMA-202ENST00000604009 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
NAMA-202ENST00000604009 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
NAMA-202ENST00000604009 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
NAMA-202ENST00000604009 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
NAMA-202ENST00000604009 HAX1O00165 279 aa13.42□□□□□ -0.26
NAMA-202ENST00000604009 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
NAMA-202ENST00000604009 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
NAMA-202ENST00000604009 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
NAMA-202ENST00000604009 SSUH2Q9Y2M2 353 aa13.34□□□□□ -0.27
NAMA-202ENST00000604009 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
NAMA-202ENST00000604009 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
NAMA-202ENST00000604009 NISCHQ9Y2I1 1504 aa13.28□□□□□ -0.28
NAMA-202ENST00000604009 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
NAMA-202ENST00000604009 EVX2Q03828 476 aa13.19□□□□□ -0.3
NAMA-202ENST00000604009 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
NAMA-202ENST00000604009 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
NAMA-202ENST00000604009 C19orf67A6NJJ6 358 aa13.04□□□□□ -0.32
NAMA-202ENST00000604009 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
NAMA-202ENST00000604009 FARP1Q9Y4F1 1045 aaPredicted RBP12.91□□□□□ -0.34
NAMA-202ENST00000604009 GABBR2O75899 941 aa12.89□□□□□ -0.35
NAMA-202ENST00000604009 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
NAMA-202ENST00000604009 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
NAMA-202ENST00000604009 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
NAMA-202ENST00000604009 CLCN6P51797 869 aa12.74□□□□□ -0.37
NAMA-202ENST00000604009 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
NAMA-202ENST00000604009 ABCC9O60706 1549 aa12.64□□□□□ -0.39
NAMA-202ENST00000604009 LHX8Q68G74 356 aa12.61□□□□□ -0.39
NAMA-202ENST00000604009 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
NAMA-202ENST00000604009 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
NAMA-202ENST00000604009 DCBLD2Q96PD2 775 aa12.59□□□□□ -0.39
NAMA-202ENST00000604009 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
NAMA-202ENST00000604009 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
NAMA-202ENST00000604009 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
NAMA-202ENST00000604009 GALR2O43603 387 aaPredicted RBP12.48□□□□□ -0.41
NAMA-202ENST00000604009 PROM2Q8N271 834 aa12.48□□□□□ -0.41
NAMA-202ENST00000604009 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
NAMA-202ENST00000604009 MIER1Q8N108 512 aa12.4□□□□□ -0.42
NAMA-202ENST00000604009 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
NAMA-202ENST00000604009 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
NAMA-202ENST00000604009 PLCD3Q8N3E9 789 aa12.28□□□□□ -0.44
NAMA-202ENST00000604009 MS4A3Q96HJ5 214 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms