RNA–Protein interactions for RNA: ENST00000598435.1

ERVK-28-202, Transcript of endogenous retrovirus group K member 28, humanhuman

TSL 5

Gene ERVK-28, Length 400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK-28-202ENST00000598435 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
ERVK-28-202ENST00000598435 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
ERVK-28-202ENST00000598435 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
ERVK-28-202ENST00000598435 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
ERVK-28-202ENST00000598435 PLPPR3Q6T4P5 718 aa15.27■□□□□ 0.04
ERVK-28-202ENST00000598435 FOXD1Q16676 465 aa15.1■□□□□ 0.01
ERVK-28-202ENST00000598435 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
ERVK-28-202ENST00000598435 ADRA2BP18089 450 aa14.57□□□□□ -0.08
ERVK-28-202ENST00000598435 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
ERVK-28-202ENST00000598435 MSH5O43196 834 aa13.87□□□□□ -0.19
ERVK-28-202ENST00000598435 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
ERVK-28-202ENST00000598435 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
ERVK-28-202ENST00000598435 KCNA4P22459 653 aa13.23□□□□□ -0.29
ERVK-28-202ENST00000598435 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
ERVK-28-202ENST00000598435 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
ERVK-28-202ENST00000598435 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
ERVK-28-202ENST00000598435 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
ERVK-28-202ENST00000598435 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
ERVK-28-202ENST00000598435 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
ERVK-28-202ENST00000598435 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
ERVK-28-202ENST00000598435 NISCHQ9Y2I1 1504 aa12.69□□□□□ -0.38
ERVK-28-202ENST00000598435 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
ERVK-28-202ENST00000598435 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
ERVK-28-202ENST00000598435 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
ERVK-28-202ENST00000598435 DCAF8L1A6NGE4 600 aa12.38□□□□□ -0.43
ERVK-28-202ENST00000598435 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
ERVK-28-202ENST00000598435 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
ERVK-28-202ENST00000598435 ZBTB22O15209 634 aa12.2□□□□□ -0.46
ERVK-28-202ENST00000598435 CSRNP3Q8WYN3 585 aa12.17□□□□□ -0.46
ERVK-28-202ENST00000598435 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
ERVK-28-202ENST00000598435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.47
ERVK-28-202ENST00000598435 U3KPZ7 1027 aaPredicted RBP11.96□□□□□ -0.49
ERVK-28-202ENST00000598435 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
ERVK-28-202ENST00000598435 RNF39Q9H2S5 420 aa11.92□□□□□ -0.5
ERVK-28-202ENST00000598435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
ERVK-28-202ENST00000598435 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
ERVK-28-202ENST00000598435 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
ERVK-28-202ENST00000598435 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.53
ERVK-28-202ENST00000598435 ATXN8OSP0DMR3 200 aa11.73□□□□□ -0.53
ERVK-28-202ENST00000598435 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
ERVK-28-202ENST00000598435 APLP2Q06481 763 aa11.65□□□□□ -0.54
ERVK-28-202ENST00000598435 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
ERVK-28-202ENST00000598435 CACNB1Q02641 598 aaPredicted RBP11.54□□□□□ -0.56
ERVK-28-202ENST00000598435 CAPN15O75808 1086 aa11.53□□□□□ -0.56
ERVK-28-202ENST00000598435 TRHP20396 242 aaPredicted RBP11.49□□□□□ -0.57
ERVK-28-202ENST00000598435 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
ERVK-28-202ENST00000598435 DSG3P32926 999 aa11.36□□□□□ -0.59
ERVK-28-202ENST00000598435 POLA2Q14181 598 aa11.34□□□□□ -0.59
ERVK-28-202ENST00000598435 ABCB7O75027 752 aa11.32□□□□□ -0.6
ERVK-28-202ENST00000598435 MKRN4PQ13434 485 aaPredicted RBP11.15□□□□□ -0.62
ERVK-28-202ENST00000598435 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
ERVK-28-202ENST00000598435 CCDC180Q9P1Z9 1646 aa11.11□□□□□ -0.63
ERVK-28-202ENST00000598435 FBLN2P98095 1184 aa11.11□□□□□ -0.63
ERVK-28-202ENST00000598435 FKBP8Q14318 412 aa10.96□□□□□ -0.65
ERVK-28-202ENST00000598435 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
ERVK-28-202ENST00000598435 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
ERVK-28-202ENST00000598435 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
ERVK-28-202ENST00000598435 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
ERVK-28-202ENST00000598435 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
ERVK-28-202ENST00000598435 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
ERVK-28-202ENST00000598435 SSUH2Q9Y2M2 353 aa10.8□□□□□ -0.68
ERVK-28-202ENST00000598435 RBM42Q9BTD8 480 aaKnown RBP10.79□□□□□ -0.68
ERVK-28-202ENST00000598435 PROM2Q8N271 834 aa10.77□□□□□ -0.69
ERVK-28-202ENST00000598435 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
ERVK-28-202ENST00000598435 ZCCHC6Q5VYS8 1495 aaKnown RBP10.68□□□□□ -0.7
ERVK-28-202ENST00000598435 PABPN1Q86U42 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
ERVK-28-202ENST00000598435 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
ERVK-28-202ENST00000598435 FBXO3Q9UK99 471 aa10.54□□□□□ -0.72
ERVK-28-202ENST00000598435 DCAF1Q9Y4B6 1507 aa10.52□□□□□ -0.73
ERVK-28-202ENST00000598435 SPDYE1Q8NFV5 336 aaPredicted RBP10.51□□□□□ -0.73
ERVK-28-202ENST00000598435 STAG3Q9UJ98 1225 aa10.51□□□□□ -0.73
ERVK-28-202ENST00000598435 PITPNM1O00562 1244 aa10.46□□□□□ -0.73
ERVK-28-202ENST00000598435 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
ERVK-28-202ENST00000598435 ABCC9O60706 1549 aa10.44□□□□□ -0.74
ERVK-28-202ENST00000598435 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
ERVK-28-202ENST00000598435 MYO15BQ96JP2 1530 aa10.4□□□□□ -0.74
ERVK-28-202ENST00000598435 PRR29P0C7W0 189 aa10.38□□□□□ -0.75
ERVK-28-202ENST00000598435 CHRDL2Q6WN34 429 aa10.33□□□□□ -0.76
ERVK-28-202ENST00000598435 MIER1Q8N108 512 aa10.32□□□□□ -0.76
ERVK-28-202ENST00000598435 IFNLR1Q8IU57 520 aaPredicted RBP10.31□□□□□ -0.76
ERVK-28-202ENST00000598435 NACADO15069 1562 aa10.31□□□□□ -0.76
ERVK-28-202ENST00000598435 PLCD3Q8N3E9 789 aa10.3□□□□□ -0.76
ERVK-28-202ENST00000598435 CREBZFQ9NS37 354 aa10.29□□□□□ -0.76
ERVK-28-202ENST00000598435 DCAF8L2P0C7V8 631 aa10.28□□□□□ -0.76
ERVK-28-202ENST00000598435 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.76
ERVK-28-202ENST00000598435 SHROOM4Q9ULL8 1493 aa10.24□□□□□ -0.77
ERVK-28-202ENST00000598435 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
ERVK-28-202ENST00000598435 CHADLQ6NUI6 762 aa10.22□□□□□ -0.77
ERVK-28-202ENST00000598435 PIP4P2Q8N4L2 257 aa10.22□□□□□ -0.77
ERVK-28-202ENST00000598435 RB1CC1Q8TDY2 1594 aa10.21□□□□□ -0.78
ERVK-28-202ENST00000598435 MNX1P50219 401 aaPredicted RBP10.2□□□□□ -0.78
ERVK-28-202ENST00000598435 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
ERVK-28-202ENST00000598435 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
ERVK-28-202ENST00000598435 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
ERVK-28-202ENST00000598435 SCRIBQ14160 1630 aa10.18□□□□□ -0.78
ERVK-28-202ENST00000598435 SPOCK2Q92563 424 aa10.14□□□□□ -0.79
ERVK-28-202ENST00000598435 FARP1Q9Y4F1 1045 aaPredicted RBP10.13□□□□□ -0.79
ERVK-28-202ENST00000598435 UNC13AQ9UPW8 1703 aa10.11□□□□□ -0.79
ERVK-28-202ENST00000598435 NPM1P06748 294 aaKnown RBP eCLIP10.09□□□□□ -0.79
ERVK-28-202ENST00000598435 NUBP1P53384 320 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms