RNA–Protein interactions for RNA: ENST00000592251.1

TNRC6C-209, Transcript of trinucleotide repeat containing 6C, humanhuman

TSL 2

Gene TNRC6C, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6C-209ENST00000592251 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
TNRC6C-209ENST00000592251 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
TNRC6C-209ENST00000592251 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
TNRC6C-209ENST00000592251 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
TNRC6C-209ENST00000592251 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
TNRC6C-209ENST00000592251 FOXD1Q16676 465 aa17.43■□□□□ 0.38
TNRC6C-209ENST00000592251 ADRA2BP18089 450 aa17.28■□□□□ 0.36
TNRC6C-209ENST00000592251 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
TNRC6C-209ENST00000592251 KCNA4P22459 653 aa16.69■□□□□ 0.26
TNRC6C-209ENST00000592251 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
TNRC6C-209ENST00000592251 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
TNRC6C-209ENST00000592251 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
TNRC6C-209ENST00000592251 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
TNRC6C-209ENST00000592251 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
TNRC6C-209ENST00000592251 NPM3O75607 178 aaKnown RBP15.9■□□□□ 0.14
TNRC6C-209ENST00000592251 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
TNRC6C-209ENST00000592251 MSH5O43196 834 aa15.89■□□□□ 0.13
TNRC6C-209ENST00000592251 CNKSR2Q8WXI2 1034 aa15.82■□□□□ 0.12
TNRC6C-209ENST00000592251 CSRNP3Q8WYN3 585 aa15.79■□□□□ 0.12
TNRC6C-209ENST00000592251 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
TNRC6C-209ENST00000592251 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
TNRC6C-209ENST00000592251 ZBTB22O15209 634 aa15.34■□□□□ 0.05
TNRC6C-209ENST00000592251 RNF216Q9NWF9 866 aaPredicted RBP15.34■□□□□ 0.05
TNRC6C-209ENST00000592251 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
TNRC6C-209ENST00000592251 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
TNRC6C-209ENST00000592251 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
TNRC6C-209ENST00000592251 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
TNRC6C-209ENST00000592251 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
TNRC6C-209ENST00000592251 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
TNRC6C-209ENST00000592251 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.09
TNRC6C-209ENST00000592251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.1
TNRC6C-209ENST00000592251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
TNRC6C-209ENST00000592251 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
TNRC6C-209ENST00000592251 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
TNRC6C-209ENST00000592251 FKBP8Q14318 412 aa14.27□□□□□ -0.13
TNRC6C-209ENST00000592251 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
TNRC6C-209ENST00000592251 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
TNRC6C-209ENST00000592251 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
TNRC6C-209ENST00000592251 APLP2Q06481 763 aa14.06□□□□□ -0.16
TNRC6C-209ENST00000592251 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
TNRC6C-209ENST00000592251 ZNF219Q9P2Y4 722 aaPredicted RBP13.97□□□□□ -0.17
TNRC6C-209ENST00000592251 SLC24A1O60721 1099 aa13.74□□□□□ -0.21
TNRC6C-209ENST00000592251 TRHP20396 242 aaPredicted RBP13.68□□□□□ -0.22
TNRC6C-209ENST00000592251 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
TNRC6C-209ENST00000592251 FBLN2P98095 1184 aa13.66□□□□□ -0.22
TNRC6C-209ENST00000592251 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
TNRC6C-209ENST00000592251 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
TNRC6C-209ENST00000592251 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
TNRC6C-209ENST00000592251 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
TNRC6C-209ENST00000592251 CAPN15O75808 1086 aa13.6□□□□□ -0.23
TNRC6C-209ENST00000592251 POLA2Q14181 598 aa13.59□□□□□ -0.23
TNRC6C-209ENST00000592251 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
TNRC6C-209ENST00000592251 PROM2Q8N271 834 aa13.5□□□□□ -0.25
TNRC6C-209ENST00000592251 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
TNRC6C-209ENST00000592251 VASPP50552 380 aaPredicted RBP13.39□□□□□ -0.27
TNRC6C-209ENST00000592251 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
TNRC6C-209ENST00000592251 ABCB7O75027 752 aa13.37□□□□□ -0.27
TNRC6C-209ENST00000592251 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
TNRC6C-209ENST00000592251 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
TNRC6C-209ENST00000592251 DSG3P32926 999 aa13.19□□□□□ -0.3
TNRC6C-209ENST00000592251 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
TNRC6C-209ENST00000592251 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
TNRC6C-209ENST00000592251 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
TNRC6C-209ENST00000592251 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
TNRC6C-209ENST00000592251 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
TNRC6C-209ENST00000592251 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
TNRC6C-209ENST00000592251 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
TNRC6C-209ENST00000592251 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
TNRC6C-209ENST00000592251 SSUH2Q9Y2M2 353 aa13.05□□□□□ -0.32
TNRC6C-209ENST00000592251 PKD2Q13563 968 aa13.03□□□□□ -0.32
TNRC6C-209ENST00000592251 SPOCK2Q92563 424 aa13.02□□□□□ -0.33
TNRC6C-209ENST00000592251 PLCB2Q00722 1185 aa13.01□□□□□ -0.33
TNRC6C-209ENST00000592251 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
TNRC6C-209ENST00000592251 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
TNRC6C-209ENST00000592251 MIER1Q8N108 512 aa12.92□□□□□ -0.34
TNRC6C-209ENST00000592251 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
TNRC6C-209ENST00000592251 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
TNRC6C-209ENST00000592251 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
TNRC6C-209ENST00000592251 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
TNRC6C-209ENST00000592251 ZBTB47Q9UFB7 747 aaPredicted RBP12.82□□□□□ -0.36
TNRC6C-209ENST00000592251 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
TNRC6C-209ENST00000592251 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
TNRC6C-209ENST00000592251 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
TNRC6C-209ENST00000592251 RGL2O15211 777 aa12.69□□□□□ -0.38
TNRC6C-209ENST00000592251 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
TNRC6C-209ENST00000592251 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
TNRC6C-209ENST00000592251 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
TNRC6C-209ENST00000592251 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
TNRC6C-209ENST00000592251 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
TNRC6C-209ENST00000592251 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
TNRC6C-209ENST00000592251 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
TNRC6C-209ENST00000592251 GSE1Q14687 1217 aa12.57□□□□□ -0.4
TNRC6C-209ENST00000592251 AKT1S1Q96B36 256 aa12.57□□□□□ -0.4
TNRC6C-209ENST00000592251 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
TNRC6C-209ENST00000592251 SPRYD3Q8NCJ5 442 aa12.55□□□□□ -0.4
TNRC6C-209ENST00000592251 BCANQ96GW7 911 aa12.55□□□□□ -0.4
TNRC6C-209ENST00000592251 ABCC9O60706 1549 aa12.52□□□□□ -0.41
TNRC6C-209ENST00000592251 CLEC11AQ9Y240 323 aa12.5□□□□□ -0.41
TNRC6C-209ENST00000592251 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
TNRC6C-209ENST00000592251 NUBP1P53384 320 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms