RNA–Protein interactions for RNA: ENST00000591487.1

LINC01478-202, Transcript of long intergenic non-protein coding RNA 1478, humanhuman

TSL 4

Gene LINC01478, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01478-202ENST00000591487 AEBP2Q6ZN18 517 aaPredicted RBP15.38■□□□□ 0.05
LINC01478-202ENST00000591487 CHIC1Q5VXU3 224 aa15.17■□□□□ 0.02
LINC01478-202ENST00000591487 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
LINC01478-202ENST00000591487 SENP3Q9H4L4 574 aaPredicted RBP13.03□□□□□ -0.32
LINC01478-202ENST00000591487 PLPPR3Q6T4P5 718 aa12.37□□□□□ -0.43
LINC01478-202ENST00000591487 FOXD1Q16676 465 aa12.06□□□□□ -0.48
LINC01478-202ENST00000591487 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
LINC01478-202ENST00000591487 ADRA2BP18089 450 aa11.68□□□□□ -0.54
LINC01478-202ENST00000591487 PIAS4Q8N2W9 510 aaPredicted RBP11.38□□□□□ -0.59
LINC01478-202ENST00000591487 MSH5O43196 834 aa11.08□□□□□ -0.64
LINC01478-202ENST00000591487 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
LINC01478-202ENST00000591487 KCNA4P22459 653 aa10.8□□□□□ -0.68
LINC01478-202ENST00000591487 NISCHQ9Y2I1 1504 aa10.73□□□□□ -0.69
LINC01478-202ENST00000591487 SCAF1Q9H7N4 1312 aaKnown RBP10.72□□□□□ -0.69
LINC01478-202ENST00000591487 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
LINC01478-202ENST00000591487 CNKSR2Q8WXI2 1034 aa10.59□□□□□ -0.71
LINC01478-202ENST00000591487 MAPK8IP2Q13387 824 aaPredicted RBP10.56□□□□□ -0.72
LINC01478-202ENST00000591487 NPM3O75607 178 aaKnown RBP10.51□□□□□ -0.73
LINC01478-202ENST00000591487 DMRT2Q9Y5R5 561 aa10.43□□□□□ -0.74
LINC01478-202ENST00000591487 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
LINC01478-202ENST00000591487 DNAJC5BQ9UF47 199 aa10.31□□□□□ -0.76
LINC01478-202ENST00000591487 HOXD11P31277 338 aaPredicted RBP10.3□□□□□ -0.76
LINC01478-202ENST00000591487 SLC4A1APQ9BWU0 796 aaKnown RBP10.3□□□□□ -0.76
LINC01478-202ENST00000591487 EHMT2Q96KQ7 1210 aa10.11□□□□□ -0.79
LINC01478-202ENST00000591487 CSRNP3Q8WYN3 585 aa10.01□□□□□ -0.81
LINC01478-202ENST00000591487 ZBTB22O15209 634 aa9.96□□□□□ -0.82
LINC01478-202ENST00000591487 FOXD4L1Q9NU39 408 aa9.91□□□□□ -0.82
LINC01478-202ENST00000591487 SLC4A2P04920 1241 aa9.9□□□□□ -0.82
LINC01478-202ENST00000591487 DCAF8L1A6NGE4 600 aa9.85□□□□□ -0.83
LINC01478-202ENST00000591487 POTEDQ86YR6 584 aa9.83□□□□□ -0.84
LINC01478-202ENST00000591487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.72□□□□□ -0.85
LINC01478-202ENST00000591487 MYCNP04198 464 aaPredicted RBP9.71□□□□□ -0.86
LINC01478-202ENST00000591487 U3KPZ7 1027 aaPredicted RBP9.63□□□□□ -0.87
LINC01478-202ENST00000591487 ATXN8OSP0DMR3 200 aa9.6□□□□□ -0.87
LINC01478-202ENST00000591487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.56□□□□□ -0.88
LINC01478-202ENST00000591487 HNRNPUL2Q1KMD3 747 aaKnown RBP9.56□□□□□ -0.88
LINC01478-202ENST00000591487 CCDC180Q9P1Z9 1646 aa9.53□□□□□ -0.88
LINC01478-202ENST00000591487 SAMD1Q6SPF0 538 aaPredicted RBP9.53□□□□□ -0.88
LINC01478-202ENST00000591487 RNF39Q9H2S5 420 aa9.52□□□□□ -0.89
LINC01478-202ENST00000591487 ATF5Q9Y2D1 282 aaPredicted RBP9.43□□□□□ -0.9
LINC01478-202ENST00000591487 APLP2Q06481 763 aa9.42□□□□□ -0.9
LINC01478-202ENST00000591487 C1QBPQ07021 282 aaKnown RBP9.41□□□□□ -0.9
LINC01478-202ENST00000591487 SPINK5Q9NQ38 1064 aaPredicted RBP9.29□□□□□ -0.92
LINC01478-202ENST00000591487 ZNF219Q9P2Y4 722 aaPredicted RBP9.27□□□□□ -0.93
LINC01478-202ENST00000591487 CAPN15O75808 1086 aa9.22□□□□□ -0.93
LINC01478-202ENST00000591487 ABCC9O60706 1549 aa9.21□□□□□ -0.94
LINC01478-202ENST00000591487 TRHP20396 242 aaPredicted RBP9.2□□□□□ -0.94
LINC01478-202ENST00000591487 POLA2Q14181 598 aa9.12□□□□□ -0.95
LINC01478-202ENST00000591487 CACNB1Q02641 598 aaPredicted RBP9.1□□□□□ -0.95
LINC01478-202ENST00000591487 DSG3P32926 999 aa9.09□□□□□ -0.95
LINC01478-202ENST00000591487 ABCB7O75027 752 aa9.05□□□□□ -0.96
LINC01478-202ENST00000591487 MKRN4PQ13434 485 aaPredicted RBP9.04□□□□□ -0.96
LINC01478-202ENST00000591487 ZBTB12Q9Y330 459 aaPredicted RBP9.01□□□□□ -0.97
LINC01478-202ENST00000591487 FBLN2P98095 1184 aa9□□□□□ -0.97
LINC01478-202ENST00000591487 FKBP8Q14318 412 aa8.99□□□□□ -0.97
LINC01478-202ENST00000591487 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
LINC01478-202ENST00000591487 NACADO15069 1562 aa8.94□□□□□ -0.98
LINC01478-202ENST00000591487 ZCCHC6Q5VYS8 1495 aaKnown RBP8.93□□□□□ -0.98
LINC01478-202ENST00000591487 RB1CC1Q8TDY2 1594 aa8.93□□□□□ -0.98
LINC01478-202ENST00000591487 MYO15BQ96JP2 1530 aa8.89□□□□□ -0.99
LINC01478-202ENST00000591487 DCAF1Q9Y4B6 1507 aa8.88□□□□□ -0.99
LINC01478-202ENST00000591487 SPDYE4A6NLX3 237 aa8.87□□□□□ -0.99
LINC01478-202ENST00000591487 PROM2Q8N271 834 aa8.84□□□□□ -0.99
LINC01478-202ENST00000591487 SPDYE2BA6NHP3 402 aa8.79□□□□□ -1
LINC01478-202ENST00000591487 SPDYE6P0CI01 402 aa8.79□□□□□ -1
LINC01478-202ENST00000591487 SPDYE2Q495Y8 402 aa8.79□□□□□ -1
LINC01478-202ENST00000591487 OSCARQ8IYS5 282 aa8.79□□□□□ -1
LINC01478-202ENST00000591487 UNC13AQ9UPW8 1703 aa8.75□□□□□ -1.01
LINC01478-202ENST00000591487 SSUH2Q9Y2M2 353 aa8.75□□□□□ -1.01
LINC01478-202ENST00000591487 ZNF692Q9BU19 519 aaPredicted RBP8.73□□□□□ -1.01
LINC01478-202ENST00000591487 SCRIBQ14160 1630 aa8.69□□□□□ -1.02
LINC01478-202ENST00000591487 FBXO3Q9UK99 471 aa8.68□□□□□ -1.02
LINC01478-202ENST00000591487 RBM42Q9BTD8 480 aaKnown RBP8.66□□□□□ -1.02
LINC01478-202ENST00000591487 PABPN1Q86U42 306 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC01478-202ENST00000591487 BICRAQ9NZM4 1560 aa8.61□□□□□ -1.03
LINC01478-202ENST00000591487 AKT1S1Q96B36 256 aa8.59□□□□□ -1.03
LINC01478-202ENST00000591487 SHROOM4Q9ULL8 1493 aa8.55□□□□□ -1.04
LINC01478-202ENST00000591487 VASPP50552 380 aaPredicted RBP8.54□□□□□ -1.04
LINC01478-202ENST00000591487 STAG3Q9UJ98 1225 aa8.54□□□□□ -1.04
LINC01478-202ENST00000591487 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
LINC01478-202ENST00000591487 REM2Q8IYK8 340 aaPredicted RBP8.48□□□□□ -1.05
LINC01478-202ENST00000591487 SPDYE1Q8NFV5 336 aaPredicted RBP8.47□□□□□ -1.05
LINC01478-202ENST00000591487 IFNLR1Q8IU57 520 aaPredicted RBP8.45□□□□□ -1.06
LINC01478-202ENST00000591487 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
LINC01478-202ENST00000591487 EIF4G1Q04637 1599 aaKnown RBP8.39□□□□□ -1.07
LINC01478-202ENST00000591487 PITPNM1O00562 1244 aa8.38□□□□□ -1.07
LINC01478-202ENST00000591487 MIER1Q8N108 512 aa8.37□□□□□ -1.07
LINC01478-202ENST00000591487 PLCD3Q8N3E9 789 aa8.37□□□□□ -1.07
LINC01478-202ENST00000591487 CLEC11AQ9Y240 323 aa8.37□□□□□ -1.07
LINC01478-202ENST00000591487 CC2D2AQ9P2K1 1620 aa8.36□□□□□ -1.07
LINC01478-202ENST00000591487 PRR29P0C7W0 189 aa8.35□□□□□ -1.07
LINC01478-202ENST00000591487 BAZ1AQ9NRL2 1556 aaPredicted RBP8.32□□□□□ -1.08
LINC01478-202ENST00000591487 PLEKHG5O94827 1062 aa8.32□□□□□ -1.08
LINC01478-202ENST00000591487 ZBTB47Q9UFB7 747 aaPredicted RBP8.32□□□□□ -1.08
LINC01478-202ENST00000591487 CECR2Q9BXF3 1484 aa8.32□□□□□ -1.08
LINC01478-202ENST00000591487 CREBZFQ9NS37 354 aa8.31□□□□□ -1.08
LINC01478-202ENST00000591487 SMARCA4P51532 1647 aa8.31□□□□□ -1.08
LINC01478-202ENST00000591487 KLHL34Q8N239 644 aa8.3□□□□□ -1.08
LINC01478-202ENST00000591487 SPOCK2Q92563 424 aa8.3□□□□□ -1.08
LINC01478-202ENST00000591487 MNX1P50219 401 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms