RNA–Protein interactions for RNA: ENST00000589466.1

LINC00906-204, long intergenic non-protein coding RNA 906, humanhuman

TSL 3

Gene LINC00906, Length 403 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00906-204ENST00000589466 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
LINC00906-204ENST00000589466 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
LINC00906-204ENST00000589466 SENP3Q9H4L4 574 aaPredicted RBP20.24■□□□□ 0.83
LINC00906-204ENST00000589466 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
LINC00906-204ENST00000589466 FOXD1Q16676 465 aa19.01■□□□□ 0.63
LINC00906-204ENST00000589466 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
LINC00906-204ENST00000589466 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
LINC00906-204ENST00000589466 MSH5O43196 834 aa17.7■□□□□ 0.42
LINC00906-204ENST00000589466 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
LINC00906-204ENST00000589466 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
LINC00906-204ENST00000589466 ADRA2BP18089 450 aa17.62■□□□□ 0.41
LINC00906-204ENST00000589466 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
LINC00906-204ENST00000589466 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
LINC00906-204ENST00000589466 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
LINC00906-204ENST00000589466 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
LINC00906-204ENST00000589466 HOXD11P31277 338 aaPredicted RBP15.43■□□□□ 0.06
LINC00906-204ENST00000589466 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
LINC00906-204ENST00000589466 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
LINC00906-204ENST00000589466 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
LINC00906-204ENST00000589466 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
LINC00906-204ENST00000589466 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
LINC00906-204ENST00000589466 NISCHQ9Y2I1 1504 aa14.99□□□□□ -0.01
LINC00906-204ENST00000589466 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
LINC00906-204ENST00000589466 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
LINC00906-204ENST00000589466 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
LINC00906-204ENST00000589466 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
LINC00906-204ENST00000589466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC00906-204ENST00000589466 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
LINC00906-204ENST00000589466 KCNA4P22459 653 aa14.39□□□□□ -0.11
LINC00906-204ENST00000589466 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
LINC00906-204ENST00000589466 SLC4A2P04920 1241 aa14.21□□□□□ -0.13
LINC00906-204ENST00000589466 CAPN15O75808 1086 aa14.17□□□□□ -0.14
LINC00906-204ENST00000589466 DSG3P32926 999 aa14.17□□□□□ -0.14
LINC00906-204ENST00000589466 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
LINC00906-204ENST00000589466 ABCB7O75027 752 aa13.89□□□□□ -0.19
LINC00906-204ENST00000589466 ZNF219Q9P2Y4 722 aaPredicted RBP13.8□□□□□ -0.2
LINC00906-204ENST00000589466 POTEHQ6S545 545 aa13.79□□□□□ -0.2
LINC00906-204ENST00000589466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.77□□□□□ -0.21
LINC00906-204ENST00000589466 APLP2Q06481 763 aa13.77□□□□□ -0.21
LINC00906-204ENST00000589466 HNRNPUL2Q1KMD3 747 aaKnown RBP13.77□□□□□ -0.21
LINC00906-204ENST00000589466 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
LINC00906-204ENST00000589466 MYCNP04198 464 aaPredicted RBP13.59□□□□□ -0.23
LINC00906-204ENST00000589466 POLA2Q14181 598 aa13.55□□□□□ -0.24
LINC00906-204ENST00000589466 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
LINC00906-204ENST00000589466 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
LINC00906-204ENST00000589466 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
LINC00906-204ENST00000589466 FOXD4L1Q9NU39 408 aa13.38□□□□□ -0.27
LINC00906-204ENST00000589466 ZBTB22O15209 634 aa13.28□□□□□ -0.28
LINC00906-204ENST00000589466 CCDC180Q9P1Z9 1646 aa13.25□□□□□ -0.29
LINC00906-204ENST00000589466 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
LINC00906-204ENST00000589466 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
LINC00906-204ENST00000589466 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
LINC00906-204ENST00000589466 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
LINC00906-204ENST00000589466 ABCC9O60706 1549 aa13.08□□□□□ -0.31
LINC00906-204ENST00000589466 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
LINC00906-204ENST00000589466 ATXN8OSP0DMR3 200 aa12.95□□□□□ -0.34
LINC00906-204ENST00000589466 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
LINC00906-204ENST00000589466 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
LINC00906-204ENST00000589466 FXR2P51116 673 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00906-204ENST00000589466 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
LINC00906-204ENST00000589466 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
LINC00906-204ENST00000589466 FBLN2P98095 1184 aa12.75□□□□□ -0.37
LINC00906-204ENST00000589466 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
LINC00906-204ENST00000589466 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
LINC00906-204ENST00000589466 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
LINC00906-204ENST00000589466 HAX1O00165 279 aa12.73□□□□□ -0.37
LINC00906-204ENST00000589466 EVX2Q03828 476 aa12.7□□□□□ -0.38
LINC00906-204ENST00000589466 EHMT2Q96KQ7 1210 aa12.7□□□□□ -0.38
LINC00906-204ENST00000589466 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
LINC00906-204ENST00000589466 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
LINC00906-204ENST00000589466 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
LINC00906-204ENST00000589466 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
LINC00906-204ENST00000589466 PRKAR2AP13861 404 aaKnown RBP12.56□□□□□ -0.4
LINC00906-204ENST00000589466 SPDYE1Q8NFV5 336 aaPredicted RBP12.55□□□□□ -0.4
LINC00906-204ENST00000589466 ZCCHC6Q5VYS8 1495 aaKnown RBP12.51□□□□□ -0.41
LINC00906-204ENST00000589466 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
LINC00906-204ENST00000589466 RB1CC1Q8TDY2 1594 aa12.49□□□□□ -0.41
LINC00906-204ENST00000589466 NACADO15069 1562 aa12.47□□□□□ -0.41
LINC00906-204ENST00000589466 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
LINC00906-204ENST00000589466 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC00906-204ENST00000589466 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
LINC00906-204ENST00000589466 MYO15BQ96JP2 1530 aa12.37□□□□□ -0.43
LINC00906-204ENST00000589466 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
LINC00906-204ENST00000589466 DCAF1Q9Y4B6 1507 aa12.35□□□□□ -0.43
LINC00906-204ENST00000589466 GABBR2O75899 941 aa12.3□□□□□ -0.44
LINC00906-204ENST00000589466 UNC13AQ9UPW8 1703 aa12.2□□□□□ -0.46
LINC00906-204ENST00000589466 SCRIBQ14160 1630 aa12.2□□□□□ -0.46
LINC00906-204ENST00000589466 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
LINC00906-204ENST00000589466 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
LINC00906-204ENST00000589466 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
LINC00906-204ENST00000589466 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
LINC00906-204ENST00000589466 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
LINC00906-204ENST00000589466 LHX8Q68G74 356 aa12.06□□□□□ -0.48
LINC00906-204ENST00000589466 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
LINC00906-204ENST00000589466 STAG3Q9UJ98 1225 aa11.97□□□□□ -0.49
LINC00906-204ENST00000589466 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
LINC00906-204ENST00000589466 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
LINC00906-204ENST00000589466 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
LINC00906-204ENST00000589466 CLCN6P51797 869 aa11.88□□□□□ -0.51
LINC00906-204ENST00000589466 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms