RNA–Protein interactions for RNA: ENST00000568147.5

TCF4-237, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-237ENST00000568147 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
TCF4-237ENST00000568147 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
TCF4-237ENST00000568147 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
TCF4-237ENST00000568147 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
TCF4-237ENST00000568147 FOXD1Q16676 465 aa18.98■□□□□ 0.63
TCF4-237ENST00000568147 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
TCF4-237ENST00000568147 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
TCF4-237ENST00000568147 ADRA2BP18089 450 aa18.05■□□□□ 0.48
TCF4-237ENST00000568147 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
TCF4-237ENST00000568147 MSH5O43196 834 aa17.56■□□□□ 0.4
TCF4-237ENST00000568147 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
TCF4-237ENST00000568147 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
TCF4-237ENST00000568147 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
TCF4-237ENST00000568147 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
TCF4-237ENST00000568147 DMRT2Q9Y5R5 561 aa16.22■□□□□ 0.19
TCF4-237ENST00000568147 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
TCF4-237ENST00000568147 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
TCF4-237ENST00000568147 HOXD11P31277 338 aaPredicted RBP15.75■□□□□ 0.11
TCF4-237ENST00000568147 KCNA4P22459 653 aa15.74■□□□□ 0.11
TCF4-237ENST00000568147 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
TCF4-237ENST00000568147 NPM3O75607 178 aaKnown RBP15.68■□□□□ 0.1
TCF4-237ENST00000568147 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
TCF4-237ENST00000568147 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
TCF4-237ENST00000568147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.07■□□□□ 0
TCF4-237ENST00000568147 RNF39Q9H2S5 420 aa15.04■□□□□ -0
TCF4-237ENST00000568147 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
TCF4-237ENST00000568147 CACNB1Q02641 598 aaPredicted RBP14.9□□□□□ -0.02
TCF4-237ENST00000568147 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
TCF4-237ENST00000568147 C1QBPQ07021 282 aaKnown RBP14.82□□□□□ -0.04
TCF4-237ENST00000568147 U3KPZ7 1027 aaPredicted RBP14.78□□□□□ -0.04
TCF4-237ENST00000568147 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
TCF4-237ENST00000568147 ZBTB22O15209 634 aa14.49□□□□□ -0.09
TCF4-237ENST00000568147 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
TCF4-237ENST00000568147 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
TCF4-237ENST00000568147 CAPN15O75808 1086 aa14.44□□□□□ -0.1
TCF4-237ENST00000568147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
TCF4-237ENST00000568147 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
TCF4-237ENST00000568147 SAMD1Q6SPF0 538 aaPredicted RBP14.38□□□□□ -0.11
TCF4-237ENST00000568147 APLP2Q06481 763 aa14.33□□□□□ -0.12
TCF4-237ENST00000568147 TRHP20396 242 aaPredicted RBP14.31□□□□□ -0.12
TCF4-237ENST00000568147 DSG3P32926 999 aa14.23□□□□□ -0.13
TCF4-237ENST00000568147 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
TCF4-237ENST00000568147 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.13
TCF4-237ENST00000568147 ABCB7O75027 752 aa14.17□□□□□ -0.14
TCF4-237ENST00000568147 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
TCF4-237ENST00000568147 CSRNP3Q8WYN3 585 aa14.15□□□□□ -0.14
TCF4-237ENST00000568147 NISCHQ9Y2I1 1504 aa14.14□□□□□ -0.15
TCF4-237ENST00000568147 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
TCF4-237ENST00000568147 POLA2Q14181 598 aa13.99□□□□□ -0.17
TCF4-237ENST00000568147 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
TCF4-237ENST00000568147 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
TCF4-237ENST00000568147 FBLN2P98095 1184 aa13.53□□□□□ -0.24
TCF4-237ENST00000568147 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
TCF4-237ENST00000568147 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
TCF4-237ENST00000568147 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
TCF4-237ENST00000568147 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
TCF4-237ENST00000568147 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
TCF4-237ENST00000568147 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
TCF4-237ENST00000568147 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
TCF4-237ENST00000568147 REM2Q8IYK8 340 aaPredicted RBP13.22□□□□□ -0.29
TCF4-237ENST00000568147 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
TCF4-237ENST00000568147 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
TCF4-237ENST00000568147 PITPNM1O00562 1244 aa13.08□□□□□ -0.32
TCF4-237ENST00000568147 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
TCF4-237ENST00000568147 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
TCF4-237ENST00000568147 POTEHQ6S545 545 aa13.04□□□□□ -0.32
TCF4-237ENST00000568147 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
TCF4-237ENST00000568147 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
TCF4-237ENST00000568147 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
TCF4-237ENST00000568147 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.35
TCF4-237ENST00000568147 FKBP8Q14318 412 aa12.83□□□□□ -0.36
TCF4-237ENST00000568147 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
TCF4-237ENST00000568147 PRKAR2AP13861 404 aaKnown RBP12.75□□□□□ -0.37
TCF4-237ENST00000568147 PROM2Q8N271 834 aa12.74□□□□□ -0.37
TCF4-237ENST00000568147 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
TCF4-237ENST00000568147 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
TCF4-237ENST00000568147 HAX1O00165 279 aa12.59□□□□□ -0.39
TCF4-237ENST00000568147 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
TCF4-237ENST00000568147 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
TCF4-237ENST00000568147 EVX2Q03828 476 aa12.48□□□□□ -0.41
TCF4-237ENST00000568147 C19orf67A6NJJ6 358 aa12.44□□□□□ -0.42
TCF4-237ENST00000568147 MIER1Q8N108 512 aa12.44□□□□□ -0.42
TCF4-237ENST00000568147 CCDC180Q9P1Z9 1646 aa12.4□□□□□ -0.42
TCF4-237ENST00000568147 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
TCF4-237ENST00000568147 SP7Q8TDD2 431 aaPredicted RBP12.39□□□□□ -0.43
TCF4-237ENST00000568147 PLCD3Q8N3E9 789 aa12.38□□□□□ -0.43
TCF4-237ENST00000568147 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
TCF4-237ENST00000568147 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
TCF4-237ENST00000568147 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
TCF4-237ENST00000568147 NPM1P06748 294 aaKnown RBP eCLIP12.33□□□□□ -0.44
TCF4-237ENST00000568147 ABCC9O60706 1549 aa12.28□□□□□ -0.44
TCF4-237ENST00000568147 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.45
TCF4-237ENST00000568147 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
TCF4-237ENST00000568147 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
TCF4-237ENST00000568147 GABBR2O75899 941 aa12.19□□□□□ -0.46
TCF4-237ENST00000568147 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
TCF4-237ENST00000568147 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
TCF4-237ENST00000568147 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
TCF4-237ENST00000568147 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
TCF4-237ENST00000568147 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms