RNA–Protein interactions for RNA: ENST00000567113.5

USP7-216, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 2

Gene USP7, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-216ENST00000567113 AEBP2Q6ZN18 517 aaPredicted RBP18.93■□□□□ 0.62
USP7-216ENST00000567113 CHIC1Q5VXU3 224 aa17.83■□□□□ 0.44
USP7-216ENST00000567113 SENP3Q9H4L4 574 aaPredicted RBP16.36■□□□□ 0.21
USP7-216ENST00000567113 PHF23Q9BUL5 403 aaPredicted RBP16.01■□□□□ 0.15
USP7-216ENST00000567113 FOXD1Q16676 465 aa15.21■□□□□ 0.03
USP7-216ENST00000567113 POTEDQ86YR6 584 aa14.95□□□□□ -0.02
USP7-216ENST00000567113 MSH5O43196 834 aa14.55□□□□□ -0.08
USP7-216ENST00000567113 PIAS4Q8N2W9 510 aaPredicted RBP14.13□□□□□ -0.15
USP7-216ENST00000567113 PLPPR3Q6T4P5 718 aa13.86□□□□□ -0.19
USP7-216ENST00000567113 PPP6R1Q9UPN7 881 aa13.78□□□□□ -0.2
USP7-216ENST00000567113 ADRA2BP18089 450 aa13.73□□□□□ -0.21
USP7-216ENST00000567113 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
USP7-216ENST00000567113 CACNB1Q02641 598 aaPredicted RBP12.73□□□□□ -0.37
USP7-216ENST00000567113 MAPK8IP2Q13387 824 aaPredicted RBP12.73□□□□□ -0.37
USP7-216ENST00000567113 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
USP7-216ENST00000567113 DCAF8L1A6NGE4 600 aa12.33□□□□□ -0.44
USP7-216ENST00000567113 RNF39Q9H2S5 420 aa12.31□□□□□ -0.44
USP7-216ENST00000567113 HOXD11P31277 338 aaPredicted RBP12.2□□□□□ -0.46
USP7-216ENST00000567113 C1QBPQ07021 282 aaKnown RBP12.15□□□□□ -0.46
USP7-216ENST00000567113 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
USP7-216ENST00000567113 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
USP7-216ENST00000567113 RNF216Q9NWF9 866 aaPredicted RBP11.99□□□□□ -0.49
USP7-216ENST00000567113 DNAJC5BQ9UF47 199 aa11.98□□□□□ -0.49
USP7-216ENST00000567113 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
USP7-216ENST00000567113 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
USP7-216ENST00000567113 NISCHQ9Y2I1 1504 aa11.76□□□□□ -0.53
USP7-216ENST00000567113 POTEHQ6S545 545 aa11.64□□□□□ -0.55
USP7-216ENST00000567113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP7-216ENST00000567113 KCNA4P22459 653 aa11.54□□□□□ -0.56
USP7-216ENST00000567113 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
USP7-216ENST00000567113 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
USP7-216ENST00000567113 DSG3P32926 999 aa11.34□□□□□ -0.59
USP7-216ENST00000567113 CAPN15O75808 1086 aa11.3□□□□□ -0.6
USP7-216ENST00000567113 U3KPZ7 1027 aaPredicted RBP11.29□□□□□ -0.6
USP7-216ENST00000567113 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
USP7-216ENST00000567113 SPINK5Q9NQ38 1064 aaPredicted RBP11.23□□□□□ -0.61
USP7-216ENST00000567113 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
USP7-216ENST00000567113 SLC4A1APQ9BWU0 796 aaKnown RBP11.17□□□□□ -0.62
USP7-216ENST00000567113 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
USP7-216ENST00000567113 APLP2Q06481 763 aa11.09□□□□□ -0.63
USP7-216ENST00000567113 ZNF219Q9P2Y4 722 aaPredicted RBP11.03□□□□□ -0.64
USP7-216ENST00000567113 TRHP20396 242 aaPredicted RBP10.97□□□□□ -0.65
USP7-216ENST00000567113 ABCB7O75027 752 aa10.94□□□□□ -0.66
USP7-216ENST00000567113 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
USP7-216ENST00000567113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.92□□□□□ -0.66
USP7-216ENST00000567113 HNRNPUL2Q1KMD3 747 aaKnown RBP10.92□□□□□ -0.66
USP7-216ENST00000567113 SLC4A2P04920 1241 aa10.84□□□□□ -0.67
USP7-216ENST00000567113 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
USP7-216ENST00000567113 SAMD1Q6SPF0 538 aaPredicted RBP10.8□□□□□ -0.68
USP7-216ENST00000567113 ABCC9O60706 1549 aa10.78□□□□□ -0.68
USP7-216ENST00000567113 SP7Q8TDD2 431 aaPredicted RBP10.69□□□□□ -0.7
USP7-216ENST00000567113 ZBTB22O15209 634 aa10.65□□□□□ -0.7
USP7-216ENST00000567113 CCDC180Q9P1Z9 1646 aa10.58□□□□□ -0.72
USP7-216ENST00000567113 POLA2Q14181 598 aa10.56□□□□□ -0.72
USP7-216ENST00000567113 AKT1S1Q96B36 256 aa10.54□□□□□ -0.72
USP7-216ENST00000567113 MYCNP04198 464 aaPredicted RBP10.48□□□□□ -0.73
USP7-216ENST00000567113 ZBTB12Q9Y330 459 aaPredicted RBP10.45□□□□□ -0.74
USP7-216ENST00000567113 PIP4P2Q8N4L2 257 aa10.43□□□□□ -0.74
USP7-216ENST00000567113 REM2Q8IYK8 340 aaPredicted RBP10.39□□□□□ -0.75
USP7-216ENST00000567113 HAX1O00165 279 aa10.38□□□□□ -0.75
USP7-216ENST00000567113 PRKCSHP14314 528 aaPredicted RBP10.36□□□□□ -0.75
USP7-216ENST00000567113 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.762e-7■■□□□ 13.4
USP7-216ENST00000567113 FOXD4L1Q9NU39 408 aa10.3□□□□□ -0.76
USP7-216ENST00000567113 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
USP7-216ENST00000567113 FKBP8Q14318 412 aa10.27□□□□□ -0.77
USP7-216ENST00000567113 OSCARQ8IYS5 282 aa10.25□□□□□ -0.77
USP7-216ENST00000567113 BCANQ96GW7 911 aa10.25□□□□□ -0.77
USP7-216ENST00000567113 DAXXQ9UER7 740 aaPredicted RBP10.25□□□□□ -0.77
USP7-216ENST00000567113 PLCB2Q00722 1185 aa10.22□□□□□ -0.77
USP7-216ENST00000567113 TAOK2Q9UL54 1235 aa10.22□□□□□ -0.77
USP7-216ENST00000567113 RB1CC1Q8TDY2 1594 aa10.18□□□□□ -0.78
USP7-216ENST00000567113 ATF5Q9Y2D1 282 aaPredicted RBP10.14□□□□□ -0.79
USP7-216ENST00000567113 EVX2Q03828 476 aa10.12□□□□□ -0.79
USP7-216ENST00000567113 NACADO15069 1562 aa10.11□□□□□ -0.79
USP7-216ENST00000567113 HAP1P54257 671 aaPredicted RBP10.11□□□□□ -0.79
USP7-216ENST00000567113 TPRNQ4KMQ1 711 aa10.05□□□□□ -0.8
USP7-216ENST00000567113 SPDYE2BA6NHP3 402 aa10.03□□□□□ -0.8
USP7-216ENST00000567113 SPDYE6P0CI01 402 aa10.03□□□□□ -0.8
USP7-216ENST00000567113 SPDYE2Q495Y8 402 aa10.03□□□□□ -0.8
USP7-216ENST00000567113 PABPN1Q86U42 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
USP7-216ENST00000567113 PRKAR2AP13861 404 aaKnown RBP10.01□□□□□ -0.81
USP7-216ENST00000567113 LHX8Q68G74 356 aa10.01□□□□□ -0.81
USP7-216ENST00000567113 ARXQ96QS3 562 aa10.01□□□□□ -0.81
USP7-216ENST00000567113 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
USP7-216ENST00000567113 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
USP7-216ENST00000567113 SPDYE1Q8NFV5 336 aaPredicted RBP9.98□□□□□ -0.81
USP7-216ENST00000567113 TIMELESSQ9UNS1 1208 aa9.97□□□□□ -0.81
USP7-216ENST00000567113 BICRAQ9NZM4 1560 aa9.97□□□□□ -0.81
USP7-216ENST00000567113 VSIG10Q8N0Z9 540 aa9.96□□□□□ -0.82
USP7-216ENST00000567113 GABBR2O75899 941 aa9.95□□□□□ -0.82
USP7-216ENST00000567113 FBLN2P98095 1184 aa9.93□□□□□ -0.82
USP7-216ENST00000567113 CLEC11AQ9Y240 323 aa9.92□□□□□ -0.82
USP7-216ENST00000567113 UNC13AQ9UPW8 1703 aa9.9□□□□□ -0.82
USP7-216ENST00000567113 TULP1O00294 542 aaPredicted RBP9.9□□□□□ -0.82
USP7-216ENST00000567113 DCAF8L2P0C7V8 631 aa9.89□□□□□ -0.83
USP7-216ENST00000567113 ATXN8OSP0DMR3 200 aa9.87□□□□□ -0.83
USP7-216ENST00000567113 SHROOM4Q9ULL8 1493 aa9.83□□□□□ -0.84
USP7-216ENST00000567113 DNAJC5Q9H3Z4 198 aa9.81□□□□□ -0.84
USP7-216ENST00000567113 SSUH2Q9Y2M2 353 aa9.81□□□□□ -0.84
USP7-216ENST00000567113 ZNF692Q9BU19 519 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms