RNA–Protein interactions for RNA: ENST00000566514.5

TCF4-234, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-234ENST00000566514 AEBP2Q6ZN18 517 aaPredicted RBP25.06■■□□□ 1.6
TCF4-234ENST00000566514 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
TCF4-234ENST00000566514 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
TCF4-234ENST00000566514 PHF23Q9BUL5 403 aaPredicted RBP21.29■■□□□ 1
TCF4-234ENST00000566514 FOXD1Q16676 465 aa19.81■□□□□ 0.76
TCF4-234ENST00000566514 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
TCF4-234ENST00000566514 ADRA2BP18089 450 aa18.88■□□□□ 0.61
TCF4-234ENST00000566514 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
TCF4-234ENST00000566514 PIAS4Q8N2W9 510 aaPredicted RBP18.65■□□□□ 0.58
TCF4-234ENST00000566514 MSH5O43196 834 aa18.35■□□□□ 0.53
TCF4-234ENST00000566514 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
TCF4-234ENST00000566514 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
TCF4-234ENST00000566514 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
TCF4-234ENST00000566514 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
TCF4-234ENST00000566514 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
TCF4-234ENST00000566514 CNKSR2Q8WXI2 1034 aa16.8■□□□□ 0.28
TCF4-234ENST00000566514 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
TCF4-234ENST00000566514 KCNA4P22459 653 aa16.57■□□□□ 0.24
TCF4-234ENST00000566514 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
TCF4-234ENST00000566514 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
TCF4-234ENST00000566514 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
TCF4-234ENST00000566514 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
TCF4-234ENST00000566514 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
TCF4-234ENST00000566514 NISCHQ9Y2I1 1504 aa15.92■□□□□ 0.14
TCF4-234ENST00000566514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.12
TCF4-234ENST00000566514 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
TCF4-234ENST00000566514 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
TCF4-234ENST00000566514 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
TCF4-234ENST00000566514 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
TCF4-234ENST00000566514 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
TCF4-234ENST00000566514 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
TCF4-234ENST00000566514 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
TCF4-234ENST00000566514 ZBTB22O15209 634 aa15.22■□□□□ 0.03
TCF4-234ENST00000566514 MYCNP04198 464 aaPredicted RBP15.21■□□□□ 0.03
TCF4-234ENST00000566514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
TCF4-234ENST00000566514 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
TCF4-234ENST00000566514 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
TCF4-234ENST00000566514 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
TCF4-234ENST00000566514 CAPN15O75808 1086 aa15.11■□□□□ 0.01
TCF4-234ENST00000566514 APLP2Q06481 763 aa15.1■□□□□ 0.01
TCF4-234ENST00000566514 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
TCF4-234ENST00000566514 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
TCF4-234ENST00000566514 CSRNP3Q8WYN3 585 aa14.94□□□□□ -0.02
TCF4-234ENST00000566514 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
TCF4-234ENST00000566514 DSG3P32926 999 aa14.87□□□□□ -0.03
TCF4-234ENST00000566514 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
TCF4-234ENST00000566514 ABCB7O75027 752 aa14.8□□□□□ -0.04
TCF4-234ENST00000566514 ATXN8OSP0DMR3 200 aa14.76□□□□□ -0.05
TCF4-234ENST00000566514 POLA2Q14181 598 aa14.68□□□□□ -0.06
TCF4-234ENST00000566514 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
TCF4-234ENST00000566514 FBLN2P98095 1184 aa14.25□□□□□ -0.13
TCF4-234ENST00000566514 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
TCF4-234ENST00000566514 ABCC9O60706 1549 aa14.21□□□□□ -0.13
TCF4-234ENST00000566514 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
TCF4-234ENST00000566514 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
TCF4-234ENST00000566514 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
TCF4-234ENST00000566514 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
TCF4-234ENST00000566514 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
TCF4-234ENST00000566514 SPDYE2Q495Y8 402 aa13.97□□□□□ -0.17
TCF4-234ENST00000566514 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
TCF4-234ENST00000566514 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
TCF4-234ENST00000566514 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
TCF4-234ENST00000566514 SSUH2Q9Y2M2 353 aa13.81□□□□□ -0.2
TCF4-234ENST00000566514 SPDYE4A6NLX3 237 aa13.76□□□□□ -0.21
TCF4-234ENST00000566514 PABPN1Q86U42 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
TCF4-234ENST00000566514 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
TCF4-234ENST00000566514 PITPNM1O00562 1244 aa13.67□□□□□ -0.22
TCF4-234ENST00000566514 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
TCF4-234ENST00000566514 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
TCF4-234ENST00000566514 FKBP8Q14318 412 aa13.56□□□□□ -0.24
TCF4-234ENST00000566514 POTEHQ6S545 545 aa13.54□□□□□ -0.24
TCF4-234ENST00000566514 RB1CC1Q8TDY2 1594 aa13.52□□□□□ -0.25
TCF4-234ENST00000566514 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
TCF4-234ENST00000566514 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
TCF4-234ENST00000566514 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
TCF4-234ENST00000566514 NACADO15069 1562 aa13.44□□□□□ -0.26
TCF4-234ENST00000566514 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
TCF4-234ENST00000566514 DCAF8L2P0C7V8 631 aa13.41□□□□□ -0.26
TCF4-234ENST00000566514 PROM2Q8N271 834 aa13.41□□□□□ -0.26
TCF4-234ENST00000566514 PRKAR2AP13861 404 aaKnown RBP13.34□□□□□ -0.27
TCF4-234ENST00000566514 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
TCF4-234ENST00000566514 MYO15BQ96JP2 1530 aa13.27□□□□□ -0.29
TCF4-234ENST00000566514 UNC13AQ9UPW8 1703 aa13.23□□□□□ -0.29
TCF4-234ENST00000566514 ZCCHC6Q5VYS8 1495 aaKnown RBP13.21□□□□□ -0.3
TCF4-234ENST00000566514 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
TCF4-234ENST00000566514 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
TCF4-234ENST00000566514 HAX1O00165 279 aa13.15□□□□□ -0.3
TCF4-234ENST00000566514 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
TCF4-234ENST00000566514 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
TCF4-234ENST00000566514 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
TCF4-234ENST00000566514 MIER1Q8N108 512 aa13.11□□□□□ -0.31
TCF4-234ENST00000566514 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
TCF4-234ENST00000566514 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
TCF4-234ENST00000566514 SCRIBQ14160 1630 aa13□□□□□ -0.33
TCF4-234ENST00000566514 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
TCF4-234ENST00000566514 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
TCF4-234ENST00000566514 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
TCF4-234ENST00000566514 EVX2Q03828 476 aa12.99□□□□□ -0.33
TCF4-234ENST00000566514 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
TCF4-234ENST00000566514 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms