RNA–Protein interactions for RNA: ENST00000565932.5

EIF3C-207, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 1 (best)

Gene EIF3C, Length 3,957 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-207ENST00000565932 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
EIF3C-207ENST00000565932 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
EIF3C-207ENST00000565932 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
EIF3C-207ENST00000565932 SUPT5HO00267 1087 aaKnown RBP15.09■□□□□ 0.01
EIF3C-207ENST00000565932 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
EIF3C-207ENST00000565932 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
EIF3C-207ENST00000565932 PCGF6Q9BYE7 350 aa14.83□□□□□ -0.03
EIF3C-207ENST00000565932 HRCP23327 699 aa14.82□□□□□ -0.04
EIF3C-207ENST00000565932 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
EIF3C-207ENST00000565932 MYT1Q01538 1121 aa14.34□□□□□ -0.11
EIF3C-207ENST00000565932 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
EIF3C-207ENST00000565932 ABCC9O60706 1549 aa14.22□□□□□ -0.13
EIF3C-207ENST00000565932 FAM9AQ8IZU1 332 aaPredicted RBP14.15□□□□□ -0.14
EIF3C-207ENST00000565932 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.16
EIF3C-207ENST00000565932 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
EIF3C-207ENST00000565932 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
EIF3C-207ENST00000565932 ZCCHC6Q5VYS8 1495 aaKnown RBP13.92□□□□□ -0.18
EIF3C-207ENST00000565932 CENPBP07199 599 aaPredicted RBP13.91□□□□□ -0.18
EIF3C-207ENST00000565932 NEUROD1Q13562 356 aa13.9□□□□□ -0.18
EIF3C-207ENST00000565932 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
EIF3C-207ENST00000565932 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
EIF3C-207ENST00000565932 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
EIF3C-207ENST00000565932 ACIN1Q9UKV3 1341 aaKnown RBP13.87□□□□□ -0.19
EIF3C-207ENST00000565932 TRIM26Q12899 539 aaPredicted RBP13.85□□□□□ -0.19
EIF3C-207ENST00000565932 CHIC1Q5VXU3 224 aa13.85□□□□□ -0.19
EIF3C-207ENST00000565932 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
EIF3C-207ENST00000565932 ZEB1P37275 1124 aaPredicted RBP13.83□□□□□ -0.2
EIF3C-207ENST00000565932 RANGAP1P46060 587 aaPredicted RBP13.76□□□□□ -0.21
EIF3C-207ENST00000565932 SCRIBQ14160 1630 aa13.74□□□□□ -0.21
EIF3C-207ENST00000565932 MYO15BQ96JP2 1530 aa13.7□□□□□ -0.22
EIF3C-207ENST00000565932 BCL11AQ9H165 835 aa13.7□□□□□ -0.22
EIF3C-207ENST00000565932 CCER1Q8TC90 406 aaPredicted RBP13.67□□□□□ -0.22
EIF3C-207ENST00000565932 DIEXFQ68CQ4 756 aaKnown RBP13.62□□□□□ -0.23
EIF3C-207ENST00000565932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.6□□□□□ -0.23
EIF3C-207ENST00000565932 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
EIF3C-207ENST00000565932 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
EIF3C-207ENST00000565932 APLP2Q06481 763 aa13.42□□□□□ -0.26
EIF3C-207ENST00000565932 ATP1B4Q9UN42 357 aaPredicted RBP13.34□□□□□ -0.27
EIF3C-207ENST00000565932 BCANQ96GW7 911 aa13.32□□□□□ -0.28
EIF3C-207ENST00000565932 ANP32EQ9BTT0 268 aa13.29□□□□□ -0.28
EIF3C-207ENST00000565932 RSF1Q96T23 1441 aaPredicted RBP13.29□□□□□ -0.28
EIF3C-207ENST00000565932 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
EIF3C-207ENST00000565932 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
EIF3C-207ENST00000565932 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
EIF3C-207ENST00000565932 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
EIF3C-207ENST00000565932 NACADO15069 1562 aa13.25□□□□□ -0.29
EIF3C-207ENST00000565932 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
EIF3C-207ENST00000565932 MIER1Q8N108 512 aa13.19□□□□□ -0.3
EIF3C-207ENST00000565932 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
EIF3C-207ENST00000565932 ITGAEP38570 1179 aa13.08□□□□□ -0.31
EIF3C-207ENST00000565932 MROH2BQ7Z745 1585 aa13.08□□□□□ -0.32
EIF3C-207ENST00000565932 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
EIF3C-207ENST00000565932 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
EIF3C-207ENST00000565932 SUPT16HQ9Y5B9 1047 aaKnown RBP13.02□□□□□ -0.33
EIF3C-207ENST00000565932 BAZ1AQ9NRL2 1556 aaPredicted RBP12.96□□□□□ -0.34
EIF3C-207ENST00000565932 NEFLP07196 543 aa12.96□□□□□ -0.34
EIF3C-207ENST00000565932 ANO8Q9HCE9 1232 aaPredicted RBP12.95□□□□□ -0.34
EIF3C-207ENST00000565932 WIZO95785 1651 aa12.95□□□□□ -0.34
EIF3C-207ENST00000565932 FKBP8Q14318 412 aa12.93□□□□□ -0.34
EIF3C-207ENST00000565932 P3H3Q8IVL6 736 aa12.93□□□□□ -0.34
EIF3C-207ENST00000565932 BAZ1BQ9UIG0 1483 aaKnown RBP12.9□□□□□ -0.35
EIF3C-207ENST00000565932 CCDC136Q96JN2 1154 aa12.87□□□□□ -0.35
EIF3C-207ENST00000565932 RTN4Q9NQC3 1192 aaKnown RBP12.84□□□□□ -0.35
EIF3C-207ENST00000565932 ABCC8Q09428 1581 aa12.84□□□□□ -0.35
EIF3C-207ENST00000565932 ARID3CA6NKF2 412 aa12.84□□□□□ -0.35
EIF3C-207ENST00000565932 FBLN2P98095 1184 aa12.83□□□□□ -0.36
EIF3C-207ENST00000565932 NBR1Q14596 966 aa12.83□□□□□ -0.36
EIF3C-207ENST00000565932 CCDC88BA6NC98 1476 aa12.82□□□□□ -0.36
EIF3C-207ENST00000565932 RBM19Q9Y4C8 960 aaKnown RBP12.8□□□□□ -0.36
EIF3C-207ENST00000565932 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
EIF3C-207ENST00000565932 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
EIF3C-207ENST00000565932 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
EIF3C-207ENST00000565932 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
EIF3C-207ENST00000565932 SOGA1O94964 1423 aa12.76□□□□□ -0.37
EIF3C-207ENST00000565932 DEKP35659 375 aaKnown RBP12.73□□□□□ -0.37
EIF3C-207ENST00000565932 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
EIF3C-207ENST00000565932 IRX6P78412 446 aaPredicted RBP12.71□□□□□ -0.37
EIF3C-207ENST00000565932 SALL2Q9Y467 1007 aaPredicted RBP12.7□□□□□ -0.38
EIF3C-207ENST00000565932 TRIM52Q96A61 297 aa12.69□□□□□ -0.38
EIF3C-207ENST00000565932 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
EIF3C-207ENST00000565932 CEP162Q5TB80 1403 aa12.66□□□□□ -0.38
EIF3C-207ENST00000565932 RTL5Q5HYW3 569 aaPredicted RBP12.65□□□□□ -0.38
EIF3C-207ENST00000565932 KCNH8Q96L42 1107 aa12.65□□□□□ -0.38
EIF3C-207ENST00000565932 CDK11AQ9UQ88 783 aaPredicted RBP12.65□□□□□ -0.38
EIF3C-207ENST00000565932 ATAD2BQ9ULI0 1458 aa12.64□□□□□ -0.39
EIF3C-207ENST00000565932 CLSPNQ9HAW4 1339 aa12.63□□□□□ -0.39
EIF3C-207ENST00000565932 CLIP1P30622 1438 aa12.63□□□□□ -0.39
EIF3C-207ENST00000565932 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
EIF3C-207ENST00000565932 RUSC2Q8N2Y8 1516 aa12.59□□□□□ -0.39
EIF3C-207ENST00000565932 GOLGA3Q08378 1498 aa12.58□□□□□ -0.4
EIF3C-207ENST00000565932 MSH5O43196 834 aa12.57□□□□□ -0.4
EIF3C-207ENST00000565932 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
EIF3C-207ENST00000565932 MYT1LQ9UL68 1186 aa12.56□□□□□ -0.4
EIF3C-207ENST00000565932 DDX10Q13206 875 aaKnown RBP12.53□□□□□ -0.4
EIF3C-207ENST00000565932 EEA1Q15075 1411 aa12.53□□□□□ -0.4
EIF3C-207ENST00000565932 TNIKQ9UKE5 1360 aa12.52□□□□□ -0.41
EIF3C-207ENST00000565932 KIF27Q86VH2 1401 aa12.52□□□□□ -0.41
EIF3C-207ENST00000565932 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
EIF3C-207ENST00000565932 CUX2O14529 1486 aa12.5□□□□□ -0.41
EIF3C-207ENST00000565932 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms