RNA–Protein interactions for RNA: ENST00000565755.1

CASC16-203, Transcript of cancer susceptibility 16, humanhuman

TSL 3

Gene CASC16, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC16-203ENST00000565755 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
CASC16-203ENST00000565755 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
CASC16-203ENST00000565755 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
CASC16-203ENST00000565755 PHF23Q9BUL5 403 aaPredicted RBP19.82■□□□□ 0.76
CASC16-203ENST00000565755 FOXD1Q16676 465 aa18.46■□□□□ 0.55
CASC16-203ENST00000565755 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
CASC16-203ENST00000565755 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
CASC16-203ENST00000565755 ADRA2BP18089 450 aa17.55■□□□□ 0.4
CASC16-203ENST00000565755 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
CASC16-203ENST00000565755 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
CASC16-203ENST00000565755 MSH5O43196 834 aa17.15■□□□□ 0.34
CASC16-203ENST00000565755 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
CASC16-203ENST00000565755 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
CASC16-203ENST00000565755 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
CASC16-203ENST00000565755 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
CASC16-203ENST00000565755 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
CASC16-203ENST00000565755 NCBP3Q53F19 620 aaKnown RBP15.61■□□□□ 0.09
CASC16-203ENST00000565755 KCNA4P22459 653 aa15.43■□□□□ 0.06
CASC16-203ENST00000565755 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
CASC16-203ENST00000565755 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
CASC16-203ENST00000565755 NISCHQ9Y2I1 1504 aa15.35■□□□□ 0.05
CASC16-203ENST00000565755 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
CASC16-203ENST00000565755 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
CASC16-203ENST00000565755 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
CASC16-203ENST00000565755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.71□□□□□ -0.05
CASC16-203ENST00000565755 SLC4A1APQ9BWU0 796 aaKnown RBP14.68□□□□□ -0.06
CASC16-203ENST00000565755 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
CASC16-203ENST00000565755 CACNB1Q02641 598 aaPredicted RBP14.58□□□□□ -0.08
CASC16-203ENST00000565755 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
CASC16-203ENST00000565755 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
CASC16-203ENST00000565755 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
CASC16-203ENST00000565755 FOXD4L1Q9NU39 408 aa14.29□□□□□ -0.12
CASC16-203ENST00000565755 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
CASC16-203ENST00000565755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
CASC16-203ENST00000565755 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
CASC16-203ENST00000565755 ZBTB22O15209 634 aa14.19□□□□□ -0.14
CASC16-203ENST00000565755 APLP2Q06481 763 aa14.14□□□□□ -0.15
CASC16-203ENST00000565755 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
CASC16-203ENST00000565755 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
CASC16-203ENST00000565755 CAPN15O75808 1086 aa14.07□□□□□ -0.16
CASC16-203ENST00000565755 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
CASC16-203ENST00000565755 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
CASC16-203ENST00000565755 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
CASC16-203ENST00000565755 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
CASC16-203ENST00000565755 DSG3P32926 999 aa13.85□□□□□ -0.19
CASC16-203ENST00000565755 ATXN8OSP0DMR3 200 aa13.81□□□□□ -0.2
CASC16-203ENST00000565755 ATF5Q9Y2D1 282 aaPredicted RBP13.8□□□□□ -0.2
CASC16-203ENST00000565755 ABCB7O75027 752 aa13.77□□□□□ -0.21
CASC16-203ENST00000565755 POLA2Q14181 598 aa13.64□□□□□ -0.23
CASC16-203ENST00000565755 POTEHQ6S545 545 aa13.64□□□□□ -0.23
CASC16-203ENST00000565755 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
CASC16-203ENST00000565755 FBLN2P98095 1184 aa13.3□□□□□ -0.28
CASC16-203ENST00000565755 CCDC180Q9P1Z9 1646 aa13.29□□□□□ -0.28
CASC16-203ENST00000565755 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
CASC16-203ENST00000565755 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
CASC16-203ENST00000565755 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
CASC16-203ENST00000565755 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
CASC16-203ENST00000565755 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
CASC16-203ENST00000565755 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
CASC16-203ENST00000565755 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
CASC16-203ENST00000565755 ZCCHC6Q5VYS8 1495 aaKnown RBP12.96□□□□□ -0.34
CASC16-203ENST00000565755 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
CASC16-203ENST00000565755 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
CASC16-203ENST00000565755 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
CASC16-203ENST00000565755 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
CASC16-203ENST00000565755 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
CASC16-203ENST00000565755 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
CASC16-203ENST00000565755 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
CASC16-203ENST00000565755 DCAF1Q9Y4B6 1507 aa12.73□□□□□ -0.37
CASC16-203ENST00000565755 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
CASC16-203ENST00000565755 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
CASC16-203ENST00000565755 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
CASC16-203ENST00000565755 FKBP8Q14318 412 aa12.63□□□□□ -0.39
CASC16-203ENST00000565755 PROM2Q8N271 834 aa12.56□□□□□ -0.4
CASC16-203ENST00000565755 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
CASC16-203ENST00000565755 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
CASC16-203ENST00000565755 DCAF8L2P0C7V8 631 aa12.53□□□□□ -0.4
CASC16-203ENST00000565755 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.4
CASC16-203ENST00000565755 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
CASC16-203ENST00000565755 MYO15BQ96JP2 1530 aa12.48□□□□□ -0.41
CASC16-203ENST00000565755 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
CASC16-203ENST00000565755 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
CASC16-203ENST00000565755 SUPT5HO00267 1087 aaKnown RBP12.34□□□□□ -0.43
CASC16-203ENST00000565755 NACADO15069 1562 aa12.3□□□□□ -0.44
CASC16-203ENST00000565755 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
CASC16-203ENST00000565755 SP7Q8TDD2 431 aaPredicted RBP12.26□□□□□ -0.45
CASC16-203ENST00000565755 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
CASC16-203ENST00000565755 ABCC9O60706 1549 aa12.25□□□□□ -0.45
CASC16-203ENST00000565755 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
CASC16-203ENST00000565755 HAX1O00165 279 aa12.22□□□□□ -0.45
CASC16-203ENST00000565755 SCRIBQ14160 1630 aa12.21□□□□□ -0.46
CASC16-203ENST00000565755 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
CASC16-203ENST00000565755 MIER1Q8N108 512 aa12.18□□□□□ -0.46
CASC16-203ENST00000565755 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
CASC16-203ENST00000565755 RB1CC1Q8TDY2 1594 aa12.13□□□□□ -0.47
CASC16-203ENST00000565755 C19orf67A6NJJ6 358 aa12.12□□□□□ -0.47
CASC16-203ENST00000565755 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
CASC16-203ENST00000565755 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
CASC16-203ENST00000565755 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
CASC16-203ENST00000565755 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms