RNA–Protein interactions for RNA: ENST00000563709.1

NR2E3-201, Transcript of nuclear receptor subfamily 2 group E member 3, humanhuman

TSL 2

Gene NR2E3, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3-201ENST00000563709 AEBP2Q6ZN18 517 aaPredicted RBP20.68■□□□□ 0.9
NR2E3-201ENST00000563709 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
NR2E3-201ENST00000563709 SENP3Q9H4L4 574 aaPredicted RBP17.78■□□□□ 0.44
NR2E3-201ENST00000563709 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
NR2E3-201ENST00000563709 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
NR2E3-201ENST00000563709 FOXD1Q16676 465 aa16.65■□□□□ 0.26
NR2E3-201ENST00000563709 MSH5O43196 834 aa15.89■□□□□ 0.13
NR2E3-201ENST00000563709 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
NR2E3-201ENST00000563709 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
NR2E3-201ENST00000563709 ADRA2BP18089 450 aa14.93□□□□□ -0.02
NR2E3-201ENST00000563709 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
NR2E3-201ENST00000563709 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
NR2E3-201ENST00000563709 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
NR2E3-201ENST00000563709 MAPK8IP2Q13387 824 aaPredicted RBP13.94□□□□□ -0.18
NR2E3-201ENST00000563709 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
NR2E3-201ENST00000563709 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
NR2E3-201ENST00000563709 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
NR2E3-201ENST00000563709 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
NR2E3-201ENST00000563709 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
NR2E3-201ENST00000563709 POTEHQ6S545 545 aa13.03□□□□□ -0.32
NR2E3-201ENST00000563709 NISCHQ9Y2I1 1504 aa13.01□□□□□ -0.33
NR2E3-201ENST00000563709 PPP4R3CPQ6ZMV5 832 aa12.86□□□□□ -0.35
NR2E3-201ENST00000563709 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
NR2E3-201ENST00000563709 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
NR2E3-201ENST00000563709 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
NR2E3-201ENST00000563709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.6□□□□□ -0.39
NR2E3-201ENST00000563709 DSG3P32926 999 aa12.38□□□□□ -0.43
NR2E3-201ENST00000563709 CAPN15O75808 1086 aa12.32□□□□□ -0.44
NR2E3-201ENST00000563709 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
NR2E3-201ENST00000563709 U3KPZ7 1027 aaPredicted RBP12.19□□□□□ -0.46
NR2E3-201ENST00000563709 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
NR2E3-201ENST00000563709 ABCB7O75027 752 aa11.96□□□□□ -0.49
NR2E3-201ENST00000563709 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.49
NR2E3-201ENST00000563709 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
NR2E3-201ENST00000563709 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
NR2E3-201ENST00000563709 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
NR2E3-201ENST00000563709 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
NR2E3-201ENST00000563709 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
NR2E3-201ENST00000563709 APLP2Q06481 763 aa11.81□□□□□ -0.52
NR2E3-201ENST00000563709 CCDC180Q9P1Z9 1646 aa11.62□□□□□ -0.55
NR2E3-201ENST00000563709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
NR2E3-201ENST00000563709 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
NR2E3-201ENST00000563709 SLC4A2P04920 1241 aa11.6□□□□□ -0.55
NR2E3-201ENST00000563709 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
NR2E3-201ENST00000563709 HAX1O00165 279 aa11.48□□□□□ -0.57
NR2E3-201ENST00000563709 POLA2Q14181 598 aa11.43□□□□□ -0.58
NR2E3-201ENST00000563709 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
NR2E3-201ENST00000563709 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
NR2E3-201ENST00000563709 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
NR2E3-201ENST00000563709 ABCC9O60706 1549 aa11.3□□□□□ -0.6
NR2E3-201ENST00000563709 EVX2Q03828 476 aa11.23□□□□□ -0.61
NR2E3-201ENST00000563709 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
NR2E3-201ENST00000563709 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
NR2E3-201ENST00000563709 LHX8Q68G74 356 aa11.12□□□□□ -0.63
NR2E3-201ENST00000563709 ZBTB12Q9Y330 459 aaPredicted RBP11.11□□□□□ -0.63
NR2E3-201ENST00000563709 PLSCR2Q9NRY7 297 aa11.1□□□□□ -0.63
NR2E3-201ENST00000563709 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
NR2E3-201ENST00000563709 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
NR2E3-201ENST00000563709 KCNA4P22459 653 aa11.07□□□□□ -0.64
NR2E3-201ENST00000563709 GABBR2O75899 941 aa10.95□□□□□ -0.66
NR2E3-201ENST00000563709 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
NR2E3-201ENST00000563709 NACADO15069 1562 aa10.91□□□□□ -0.66
NR2E3-201ENST00000563709 PRKAR2AP13861 404 aaKnown RBP10.91□□□□□ -0.66
NR2E3-201ENST00000563709 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
NR2E3-201ENST00000563709 ZCCHC6Q5VYS8 1495 aaKnown RBP10.88□□□□□ -0.67
NR2E3-201ENST00000563709 ATF5Q9Y2D1 282 aaPredicted RBP10.88□□□□□ -0.67
NR2E3-201ENST00000563709 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
NR2E3-201ENST00000563709 DCAF1Q9Y4B6 1507 aa10.82□□□□□ -0.68
NR2E3-201ENST00000563709 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
NR2E3-201ENST00000563709 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
NR2E3-201ENST00000563709 SPDYE1Q8NFV5 336 aaPredicted RBP10.72□□□□□ -0.69
NR2E3-201ENST00000563709 SPDYE2BA6NHP3 402 aa10.71□□□□□ -0.69
NR2E3-201ENST00000563709 SPDYE6P0CI01 402 aa10.71□□□□□ -0.69
NR2E3-201ENST00000563709 SPDYE2Q495Y8 402 aa10.71□□□□□ -0.69
NR2E3-201ENST00000563709 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
NR2E3-201ENST00000563709 CHADLQ6NUI6 762 aa10.64□□□□□ -0.71
NR2E3-201ENST00000563709 SHROOM4Q9ULL8 1493 aa10.58□□□□□ -0.72
NR2E3-201ENST00000563709 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
NR2E3-201ENST00000563709 FOXD4L1Q9NU39 408 aa10.57□□□□□ -0.72
NR2E3-201ENST00000563709 FBLN2P98095 1184 aa10.55□□□□□ -0.72
NR2E3-201ENST00000563709 UNC13AQ9UPW8 1703 aa10.55□□□□□ -0.72
NR2E3-201ENST00000563709 DCBLD2Q96PD2 775 aa10.53□□□□□ -0.72
NR2E3-201ENST00000563709 POTEMA6NI47 508 aa10.52□□□□□ -0.73
NR2E3-201ENST00000563709 CD44P16070 742 aaKnown RBP10.52□□□□□ -0.73
NR2E3-201ENST00000563709 BICRAQ9NZM4 1560 aa10.51□□□□□ -0.73
NR2E3-201ENST00000563709 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
NR2E3-201ENST00000563709 PRR29P0C7W0 189 aa10.49□□□□□ -0.73
NR2E3-201ENST00000563709 CLCN6P51797 869 aa10.49□□□□□ -0.73
NR2E3-201ENST00000563709 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
NR2E3-201ENST00000563709 POTEGQ6S5H5 508 aa10.46□□□□□ -0.73
NR2E3-201ENST00000563709 SSUH2Q9Y2M2 353 aa10.45□□□□□ -0.74
NR2E3-201ENST00000563709 OTUD5Q96G74 571 aa10.44□□□□□ -0.74
NR2E3-201ENST00000563709 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
NR2E3-201ENST00000563709 PCDH10Q9P2E7 1040 aa10.37□□□□□ -0.75
NR2E3-201ENST00000563709 POTEB2H3BUK9 544 aa10.32□□□□□ -0.76
NR2E3-201ENST00000563709 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
NR2E3-201ENST00000563709 SLC4A1APQ9BWU0 796 aaKnown RBP10.32□□□□□ -0.76
NR2E3-201ENST00000563709 ATXN8OSP0DMR3 200 aa10.29□□□□□ -0.76
NR2E3-201ENST00000563709 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
NR2E3-201ENST00000563709 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms