RNA–Protein interactions for RNA: ENST00000560883.1

TM2D3-212, Transcript of TM2 domain containing 3, humanhuman

TSL 3

Gene TM2D3, Length 867 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-212ENST00000560883 AEBP2Q6ZN18 517 aaPredicted RBP25.27■■□□□ 1.64
TM2D3-212ENST00000560883 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.41
TM2D3-212ENST00000560883 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
TM2D3-212ENST00000560883 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
TM2D3-212ENST00000560883 FOXD1Q16676 465 aa20.15■□□□□ 0.82
TM2D3-212ENST00000560883 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
TM2D3-212ENST00000560883 MSH5O43196 834 aa18.97■□□□□ 0.63
TM2D3-212ENST00000560883 PIAS4Q8N2W9 510 aaPredicted RBP18.77■□□□□ 0.6
TM2D3-212ENST00000560883 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
TM2D3-212ENST00000560883 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
TM2D3-212ENST00000560883 ADRA2BP18089 450 aa18.62■□□□□ 0.57
TM2D3-212ENST00000560883 MAPK8IP2Q13387 824 aaPredicted RBP17.14■□□□□ 0.33
TM2D3-212ENST00000560883 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
TM2D3-212ENST00000560883 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
TM2D3-212ENST00000560883 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
TM2D3-212ENST00000560883 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
TM2D3-212ENST00000560883 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
TM2D3-212ENST00000560883 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
TM2D3-212ENST00000560883 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
TM2D3-212ENST00000560883 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
TM2D3-212ENST00000560883 RNF39Q9H2S5 420 aa16.15■□□□□ 0.18
TM2D3-212ENST00000560883 DNAJC5BQ9UF47 199 aa16.01■□□□□ 0.15
TM2D3-212ENST00000560883 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
TM2D3-212ENST00000560883 C1QBPQ07021 282 aaKnown RBP15.94■□□□□ 0.14
TM2D3-212ENST00000560883 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
TM2D3-212ENST00000560883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
TM2D3-212ENST00000560883 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
TM2D3-212ENST00000560883 KCNA4P22459 653 aa15.25■□□□□ 0.03
TM2D3-212ENST00000560883 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
TM2D3-212ENST00000560883 CAPN15O75808 1086 aa15.08■□□□□ 0
TM2D3-212ENST00000560883 DSG3P32926 999 aa15.06■□□□□ 0
TM2D3-212ENST00000560883 SLC4A2P04920 1241 aa15.05■□□□□ -0
TM2D3-212ENST00000560883 APLP2Q06481 763 aa14.92□□□□□ -0.02
TM2D3-212ENST00000560883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
TM2D3-212ENST00000560883 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
TM2D3-212ENST00000560883 ZNF219Q9P2Y4 722 aaPredicted RBP14.83□□□□□ -0.04
TM2D3-212ENST00000560883 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
TM2D3-212ENST00000560883 SAMD1Q6SPF0 538 aaPredicted RBP14.76□□□□□ -0.05
TM2D3-212ENST00000560883 ABCB7O75027 752 aa14.67□□□□□ -0.06
TM2D3-212ENST00000560883 POTEHQ6S545 545 aa14.65□□□□□ -0.06
TM2D3-212ENST00000560883 MYCNP04198 464 aaPredicted RBP14.56□□□□□ -0.08
TM2D3-212ENST00000560883 RBM42Q9BTD8 480 aaKnown RBP14.41□□□□□ -0.1
TM2D3-212ENST00000560883 POLA2Q14181 598 aa14.38□□□□□ -0.11
TM2D3-212ENST00000560883 SLC4A1APQ9BWU0 796 aaKnown RBP14.38□□□□□ -0.11
TM2D3-212ENST00000560883 FOXD4L1Q9NU39 408 aa14.32□□□□□ -0.12
TM2D3-212ENST00000560883 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
TM2D3-212ENST00000560883 ZBTB12Q9Y330 459 aaPredicted RBP14.14□□□□□ -0.15
TM2D3-212ENST00000560883 CHRDL2Q6WN34 429 aa14.12□□□□□ -0.15
TM2D3-212ENST00000560883 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
TM2D3-212ENST00000560883 ZBTB22O15209 634 aa14□□□□□ -0.17
TM2D3-212ENST00000560883 ATXN8OSP0DMR3 200 aa13.96□□□□□ -0.17
TM2D3-212ENST00000560883 NISCHQ9Y2I1 1504 aa13.9□□□□□ -0.18
TM2D3-212ENST00000560883 OSCARQ8IYS5 282 aa13.9□□□□□ -0.18
TM2D3-212ENST00000560883 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
TM2D3-212ENST00000560883 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
TM2D3-212ENST00000560883 PITPNM1O00562 1244 aa13.71□□□□□ -0.21
TM2D3-212ENST00000560883 FBLN2P98095 1184 aa13.7□□□□□ -0.22
TM2D3-212ENST00000560883 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
TM2D3-212ENST00000560883 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
TM2D3-212ENST00000560883 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
TM2D3-212ENST00000560883 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
TM2D3-212ENST00000560883 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
TM2D3-212ENST00000560883 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
TM2D3-212ENST00000560883 HAX1O00165 279 aa13.52□□□□□ -0.25
TM2D3-212ENST00000560883 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
TM2D3-212ENST00000560883 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
TM2D3-212ENST00000560883 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
TM2D3-212ENST00000560883 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
TM2D3-212ENST00000560883 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
TM2D3-212ENST00000560883 EVX2Q03828 476 aa13.32□□□□□ -0.28
TM2D3-212ENST00000560883 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
TM2D3-212ENST00000560883 C19orf67A6NJJ6 358 aa13.23□□□□□ -0.29
TM2D3-212ENST00000560883 PABPN1Q86U42 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
TM2D3-212ENST00000560883 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
TM2D3-212ENST00000560883 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
TM2D3-212ENST00000560883 GABBR2O75899 941 aa13.05□□□□□ -0.32
TM2D3-212ENST00000560883 ABCC9O60706 1549 aa13.03□□□□□ -0.32
TM2D3-212ENST00000560883 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
TM2D3-212ENST00000560883 CD44P16070 742 aaKnown RBP12.92□□□□□ -0.34
TM2D3-212ENST00000560883 CLCN6P51797 869 aa12.91□□□□□ -0.34
TM2D3-212ENST00000560883 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
TM2D3-212ENST00000560883 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
TM2D3-212ENST00000560883 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
TM2D3-212ENST00000560883 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
TM2D3-212ENST00000560883 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
TM2D3-212ENST00000560883 LHX8Q68G74 356 aa12.81□□□□□ -0.36
TM2D3-212ENST00000560883 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
TM2D3-212ENST00000560883 ZNF579Q8NAF0 562 aaKnown RBP12.76□□□□□ -0.37
TM2D3-212ENST00000560883 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
TM2D3-212ENST00000560883 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
TM2D3-212ENST00000560883 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
TM2D3-212ENST00000560883 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
TM2D3-212ENST00000560883 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
TM2D3-212ENST00000560883 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
TM2D3-212ENST00000560883 PROM2Q8N271 834 aa12.56□□□□□ -0.4
TM2D3-212ENST00000560883 CCDC180Q9P1Z9 1646 aa12.55□□□□□ -0.4
TM2D3-212ENST00000560883 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
TM2D3-212ENST00000560883 ASTLQ6HA08 431 aaPredicted RBP12.35□□□□□ -0.43
TM2D3-212ENST00000560883 PELP1Q8IZL8 1130 aaKnown RBP12.34□□□□□ -0.43
TM2D3-212ENST00000560883 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms