RNA–Protein interactions for RNA: ENST00000560006.1

SEMA6D-214, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-214ENST00000560006 AEBP2Q6ZN18 517 aaPredicted RBP20.91■□□□□ 0.94
SEMA6D-214ENST00000560006 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
SEMA6D-214ENST00000560006 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
SEMA6D-214ENST00000560006 PHF23Q9BUL5 403 aaPredicted RBP17.55■□□□□ 0.4
SEMA6D-214ENST00000560006 FOXD1Q16676 465 aa16.67■□□□□ 0.26
SEMA6D-214ENST00000560006 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
SEMA6D-214ENST00000560006 MSH5O43196 834 aa15.69■□□□□ 0.1
SEMA6D-214ENST00000560006 PIAS4Q8N2W9 510 aaPredicted RBP15.47■□□□□ 0.07
SEMA6D-214ENST00000560006 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
SEMA6D-214ENST00000560006 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
SEMA6D-214ENST00000560006 ADRA2BP18089 450 aa15.27■□□□□ 0.04
SEMA6D-214ENST00000560006 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
SEMA6D-214ENST00000560006 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
SEMA6D-214ENST00000560006 SCAF1Q9H7N4 1312 aaKnown RBP13.92□□□□□ -0.18
SEMA6D-214ENST00000560006 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
SEMA6D-214ENST00000560006 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
SEMA6D-214ENST00000560006 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
SEMA6D-214ENST00000560006 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
SEMA6D-214ENST00000560006 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
SEMA6D-214ENST00000560006 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
SEMA6D-214ENST00000560006 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
SEMA6D-214ENST00000560006 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
SEMA6D-214ENST00000560006 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
SEMA6D-214ENST00000560006 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
SEMA6D-214ENST00000560006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
SEMA6D-214ENST00000560006 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
SEMA6D-214ENST00000560006 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
SEMA6D-214ENST00000560006 DSG3P32926 999 aa12.43□□□□□ -0.42
SEMA6D-214ENST00000560006 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
SEMA6D-214ENST00000560006 CAPN15O75808 1086 aa12.36□□□□□ -0.43
SEMA6D-214ENST00000560006 POTEHQ6S545 545 aa12.32□□□□□ -0.44
SEMA6D-214ENST00000560006 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
SEMA6D-214ENST00000560006 KCNA4P22459 653 aa12.23□□□□□ -0.45
SEMA6D-214ENST00000560006 ZNF219Q9P2Y4 722 aaPredicted RBP12.1□□□□□ -0.47
SEMA6D-214ENST00000560006 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
SEMA6D-214ENST00000560006 APLP2Q06481 763 aa12.09□□□□□ -0.47
SEMA6D-214ENST00000560006 ABCB7O75027 752 aa12.07□□□□□ -0.48
SEMA6D-214ENST00000560006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
SEMA6D-214ENST00000560006 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
SEMA6D-214ENST00000560006 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
SEMA6D-214ENST00000560006 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
SEMA6D-214ENST00000560006 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
SEMA6D-214ENST00000560006 POLA2Q14181 598 aa11.73□□□□□ -0.53
SEMA6D-214ENST00000560006 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
SEMA6D-214ENST00000560006 ATF5Q9Y2D1 282 aaPredicted RBP11.55□□□□□ -0.56
SEMA6D-214ENST00000560006 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
SEMA6D-214ENST00000560006 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
SEMA6D-214ENST00000560006 ZBTB12Q9Y330 459 aaPredicted RBP11.47□□□□□ -0.57
SEMA6D-214ENST00000560006 SLC4A1APQ9BWU0 796 aaKnown RBP11.45□□□□□ -0.58
SEMA6D-214ENST00000560006 SP7Q8TDD2 431 aaPredicted RBP11.42□□□□□ -0.58
SEMA6D-214ENST00000560006 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
SEMA6D-214ENST00000560006 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
SEMA6D-214ENST00000560006 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
SEMA6D-214ENST00000560006 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
SEMA6D-214ENST00000560006 ZBTB22O15209 634 aa11.29□□□□□ -0.6
SEMA6D-214ENST00000560006 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.6
SEMA6D-214ENST00000560006 NISCHQ9Y2I1 1504 aa11.26□□□□□ -0.61
SEMA6D-214ENST00000560006 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
SEMA6D-214ENST00000560006 HAX1O00165 279 aa11.17□□□□□ -0.62
SEMA6D-214ENST00000560006 SPDYE2BA6NHP3 402 aa11.12□□□□□ -0.63
SEMA6D-214ENST00000560006 SPDYE6P0CI01 402 aa11.12□□□□□ -0.63
SEMA6D-214ENST00000560006 SPDYE2Q495Y8 402 aa11.12□□□□□ -0.63
SEMA6D-214ENST00000560006 EVX2Q03828 476 aa11.1□□□□□ -0.63
SEMA6D-214ENST00000560006 FBLN2P98095 1184 aa11.04□□□□□ -0.64
SEMA6D-214ENST00000560006 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
SEMA6D-214ENST00000560006 SSUH2Q9Y2M2 353 aa10.98□□□□□ -0.65
SEMA6D-214ENST00000560006 PRKAR2AP13861 404 aaKnown RBP10.97□□□□□ -0.65
SEMA6D-214ENST00000560006 SPDYE1Q8NFV5 336 aaPredicted RBP10.97□□□□□ -0.65
SEMA6D-214ENST00000560006 C19orf67A6NJJ6 358 aa10.93□□□□□ -0.66
SEMA6D-214ENST00000560006 CLEC11AQ9Y240 323 aa10.92□□□□□ -0.66
SEMA6D-214ENST00000560006 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
SEMA6D-214ENST00000560006 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
SEMA6D-214ENST00000560006 GABBR2O75899 941 aa10.8□□□□□ -0.68
SEMA6D-214ENST00000560006 CHADLQ6NUI6 762 aa10.79□□□□□ -0.68
SEMA6D-214ENST00000560006 PABPN1Q86U42 306 aaKnown RBP eCLIP10.74□□□□□ -0.69
SEMA6D-214ENST00000560006 PRR29P0C7W0 189 aa10.71□□□□□ -0.69
SEMA6D-214ENST00000560006 LHX8Q68G74 356 aa10.68□□□□□ -0.7
SEMA6D-214ENST00000560006 POTEIP0CG38 1075 aa10.62□□□□□ -0.71
SEMA6D-214ENST00000560006 CD44P16070 742 aaKnown RBP10.61□□□□□ -0.71
SEMA6D-214ENST00000560006 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
SEMA6D-214ENST00000560006 FARP1Q9Y4F1 1045 aaPredicted RBP10.61□□□□□ -0.71
SEMA6D-214ENST00000560006 CLCN6P51797 869 aa10.54□□□□□ -0.72
SEMA6D-214ENST00000560006 ZNF579Q8NAF0 562 aaKnown RBP10.48□□□□□ -0.73
SEMA6D-214ENST00000560006 ABCC9O60706 1549 aa10.45□□□□□ -0.74
SEMA6D-214ENST00000560006 CREBZFQ9NS37 354 aa10.45□□□□□ -0.74
SEMA6D-214ENST00000560006 DCBLD2Q96PD2 775 aa10.4□□□□□ -0.74
SEMA6D-214ENST00000560006 ZRANB1Q9UGI0 708 aa10.39□□□□□ -0.75
SEMA6D-214ENST00000560006 STAG3Q9UJ98 1225 aa10.37□□□□□ -0.75
SEMA6D-214ENST00000560006 GALR2O43603 387 aaPredicted RBP10.35□□□□□ -0.75
SEMA6D-214ENST00000560006 CCDC180Q9P1Z9 1646 aa10.31□□□□□ -0.76
SEMA6D-214ENST00000560006 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
SEMA6D-214ENST00000560006 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.77
SEMA6D-214ENST00000560006 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
SEMA6D-214ENST00000560006 OTUD5Q96G74 571 aa10.26□□□□□ -0.77
SEMA6D-214ENST00000560006 PHF12Q96QT6 1004 aa10.26□□□□□ -0.77
SEMA6D-214ENST00000560006 PAK3O75914 559 aaPredicted RBP10.22□□□□□ -0.77
SEMA6D-214ENST00000560006 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
SEMA6D-214ENST00000560006 NPM1P06748 294 aaKnown RBP eCLIP10.18□□□□□ -0.78
SEMA6D-214ENST00000560006 PLSCR2Q9NRY7 297 aa10.17□□□□□ -0.78
SEMA6D-214ENST00000560006 ASTLQ6HA08 431 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms