RNA–Protein interactions for RNA: ENST00000558990.5

RAB8B-203, Transcript of RAB8B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB8B, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8B-203ENST00000558990 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
RAB8B-203ENST00000558990 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.02
RAB8B-203ENST00000558990 SENP3Q9H4L4 574 aaPredicted RBP25.05■■□□□ 1.6
RAB8B-203ENST00000558990 PHF23Q9BUL5 403 aaPredicted RBP24.6■■□□□ 1.53
RAB8B-203ENST00000558990 FOXD1Q16676 465 aa23.22■■□□□ 1.31
RAB8B-203ENST00000558990 PLPPR3Q6T4P5 718 aa22.11■■□□□ 1.13
RAB8B-203ENST00000558990 MSH5O43196 834 aa21.95■■□□□ 1.1
RAB8B-203ENST00000558990 PIAS4Q8N2W9 510 aaPredicted RBP21.71■■□□□ 1.07
RAB8B-203ENST00000558990 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
RAB8B-203ENST00000558990 ADRA2BP18089 450 aa21.48■■□□□ 1.03
RAB8B-203ENST00000558990 POTEDQ86YR6 584 aa21.46■■□□□ 1.03
RAB8B-203ENST00000558990 SCAF1Q9H7N4 1312 aaKnown RBP19.93■□□□□ 0.78
RAB8B-203ENST00000558990 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
RAB8B-203ENST00000558990 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
RAB8B-203ENST00000558990 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
RAB8B-203ENST00000558990 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
RAB8B-203ENST00000558990 CNKSR2Q8WXI2 1034 aa19.02■□□□□ 0.64
RAB8B-203ENST00000558990 DCAF8L1A6NGE4 600 aa18.94■□□□□ 0.62
RAB8B-203ENST00000558990 RNF216Q9NWF9 866 aaPredicted RBP18.89■□□□□ 0.61
RAB8B-203ENST00000558990 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
RAB8B-203ENST00000558990 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
RAB8B-203ENST00000558990 RNF39Q9H2S5 420 aa18.63■□□□□ 0.57
RAB8B-203ENST00000558990 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
RAB8B-203ENST00000558990 C1QBPQ07021 282 aaKnown RBP18.44■□□□□ 0.54
RAB8B-203ENST00000558990 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
RAB8B-203ENST00000558990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
RAB8B-203ENST00000558990 KCNA4P22459 653 aa17.7■□□□□ 0.42
RAB8B-203ENST00000558990 U3KPZ7 1027 aaPredicted RBP17.66■□□□□ 0.42
RAB8B-203ENST00000558990 CAPN15O75808 1086 aa17.46■□□□□ 0.39
RAB8B-203ENST00000558990 APLP2Q06481 763 aa17.43■□□□□ 0.38
RAB8B-203ENST00000558990 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
RAB8B-203ENST00000558990 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
RAB8B-203ENST00000558990 DSG3P32926 999 aa17.37■□□□□ 0.37
RAB8B-203ENST00000558990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.35■□□□□ 0.37
RAB8B-203ENST00000558990 HNRNPUL2Q1KMD3 747 aaKnown RBP17.35■□□□□ 0.37
RAB8B-203ENST00000558990 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
RAB8B-203ENST00000558990 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
RAB8B-203ENST00000558990 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
RAB8B-203ENST00000558990 ABCB7O75027 752 aa16.95■□□□□ 0.3
RAB8B-203ENST00000558990 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
RAB8B-203ENST00000558990 POTEHQ6S545 545 aa16.83■□□□□ 0.28
RAB8B-203ENST00000558990 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
RAB8B-203ENST00000558990 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
RAB8B-203ENST00000558990 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
RAB8B-203ENST00000558990 POLA2Q14181 598 aa16.66■□□□□ 0.26
RAB8B-203ENST00000558990 ZBTB12Q9Y330 459 aaPredicted RBP16.5■□□□□ 0.23
RAB8B-203ENST00000558990 ATF5Q9Y2D1 282 aaPredicted RBP16.36■□□□□ 0.21
RAB8B-203ENST00000558990 CHRDL2Q6WN34 429 aa16.3■□□□□ 0.2
RAB8B-203ENST00000558990 ATXN8OSP0DMR3 200 aa16.28■□□□□ 0.2
RAB8B-203ENST00000558990 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
RAB8B-203ENST00000558990 ZBTB22O15209 634 aa16.21■□□□□ 0.19
RAB8B-203ENST00000558990 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
RAB8B-203ENST00000558990 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
RAB8B-203ENST00000558990 REM2Q8IYK8 340 aaPredicted RBP16.04■□□□□ 0.16
RAB8B-203ENST00000558990 FBLN2P98095 1184 aa15.98■□□□□ 0.15
RAB8B-203ENST00000558990 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
RAB8B-203ENST00000558990 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
RAB8B-203ENST00000558990 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
RAB8B-203ENST00000558990 PITPNM1O00562 1244 aa15.84■□□□□ 0.13
RAB8B-203ENST00000558990 PIP4P2Q8N4L2 257 aa15.84■□□□□ 0.13
RAB8B-203ENST00000558990 FXR2P51116 673 aaKnown RBP eCLIP15.78■□□□□ 0.12
RAB8B-203ENST00000558990 SP7Q8TDD2 431 aaPredicted RBP15.74■□□□□ 0.11
RAB8B-203ENST00000558990 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
RAB8B-203ENST00000558990 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
RAB8B-203ENST00000558990 SPDYE1Q8NFV5 336 aaPredicted RBP15.65■□□□□ 0.1
RAB8B-203ENST00000558990 HAX1O00165 279 aa15.63■□□□□ 0.09
RAB8B-203ENST00000558990 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
RAB8B-203ENST00000558990 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
RAB8B-203ENST00000558990 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
RAB8B-203ENST00000558990 PRKAR2AP13861 404 aaKnown RBP15.45■□□□□ 0.06
RAB8B-203ENST00000558990 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
RAB8B-203ENST00000558990 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
RAB8B-203ENST00000558990 C19orf67A6NJJ6 358 aa15.27■□□□□ 0.04
RAB8B-203ENST00000558990 EVX2Q03828 476 aa15.27■□□□□ 0.04
RAB8B-203ENST00000558990 ABCC9O60706 1549 aa15.27■□□□□ 0.03
RAB8B-203ENST00000558990 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
RAB8B-203ENST00000558990 DNAJC5Q9H3Z4 198 aa15.1■□□□□ 0.01
RAB8B-203ENST00000558990 STAG3Q9UJ98 1225 aa15.08■□□□□ 0
RAB8B-203ENST00000558990 GABBR2O75899 941 aa15.04■□□□□ -0
RAB8B-203ENST00000558990 FARP1Q9Y4F1 1045 aaPredicted RBP15.04■□□□□ -0
RAB8B-203ENST00000558990 CLCN6P51797 869 aa15.03■□□□□ -0
RAB8B-203ENST00000558990 NISCHQ9Y2I1 1504 aa14.99□□□□□ -0.01
RAB8B-203ENST00000558990 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
RAB8B-203ENST00000558990 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
RAB8B-203ENST00000558990 CREBZFQ9NS37 354 aa14.83□□□□□ -0.04
RAB8B-203ENST00000558990 ZNF579Q8NAF0 562 aaKnown RBP14.77□□□□□ -0.05
RAB8B-203ENST00000558990 LHX8Q68G74 356 aa14.76□□□□□ -0.05
RAB8B-203ENST00000558990 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
RAB8B-203ENST00000558990 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
RAB8B-203ENST00000558990 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
RAB8B-203ENST00000558990 DCBLD2Q96PD2 775 aa14.69□□□□□ -0.06
RAB8B-203ENST00000558990 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
RAB8B-203ENST00000558990 PROM2Q8N271 834 aa14.59□□□□□ -0.07
RAB8B-203ENST00000558990 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
RAB8B-203ENST00000558990 GALR2O43603 387 aaPredicted RBP14.49□□□□□ -0.09
RAB8B-203ENST00000558990 PLEKHG5O94827 1062 aa14.45□□□□□ -0.1
RAB8B-203ENST00000558990 PHF12Q96QT6 1004 aa14.45□□□□□ -0.1
RAB8B-203ENST00000558990 MIER1Q8N108 512 aa14.29□□□□□ -0.12
RAB8B-203ENST00000558990 ASTLQ6HA08 431 aaPredicted RBP14.28□□□□□ -0.12
RAB8B-203ENST00000558990 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 898.2 ms