RNA–Protein interactions for RNA: ENST00000557824.1

ISG20-204, Transcript of interferon stimulated exonuclease gene 20, humanhuman

TSL 1 (best)

Gene ISG20, Length 5,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ISG20-204ENST00000557824 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
ISG20-204ENST00000557824 PELP1Q8IZL8 1130 aaKnown RBP21.56■■□□□ 1.04
ISG20-204ENST00000557824 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
ISG20-204ENST00000557824 FAM9AQ8IZU1 332 aaPredicted RBP21.15■□□□□ 0.98
ISG20-204ENST00000557824 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
ISG20-204ENST00000557824 SHROOM4Q9ULL8 1493 aa20.95■□□□□ 0.94
ISG20-204ENST00000557824 NISCHQ9Y2I1 1504 aa20.77■□□□□ 0.92
ISG20-204ENST00000557824 APLP2Q06481 763 aa20.72■□□□□ 0.91
ISG20-204ENST00000557824 ERICH6Q7L0X2 663 aa20.7■□□□□ 0.9
ISG20-204ENST00000557824 CENPBP07199 599 aaPredicted RBP20.65■□□□□ 0.9
ISG20-204ENST00000557824 PCGF6Q9BYE7 350 aa20.6■□□□□ 0.89
ISG20-204ENST00000557824 MYT1Q01538 1121 aa20.56■□□□□ 0.88
ISG20-204ENST00000557824 CCER1Q8TC90 406 aaPredicted RBP20.56■□□□□ 0.88
ISG20-204ENST00000557824 ZEB1P37275 1124 aaPredicted RBP20.49■□□□□ 0.87
ISG20-204ENST00000557824 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
ISG20-204ENST00000557824 NEFLP07196 543 aa20.15■□□□□ 0.82
ISG20-204ENST00000557824 YTHDC1Q96MU7 727 aaKnown RBP20.06■□□□□ 0.8
ISG20-204ENST00000557824 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
ISG20-204ENST00000557824 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
ISG20-204ENST00000557824 ATP1B4Q9UN42 357 aaPredicted RBP19.77■□□□□ 0.76
ISG20-204ENST00000557824 MYT1LQ9UL68 1186 aa19.72■□□□□ 0.75
ISG20-204ENST00000557824 UBTFP17480 764 aaKnown RBP19.72■□□□□ 0.75
ISG20-204ENST00000557824 HRCP23327 699 aa19.67■□□□□ 0.74
ISG20-204ENST00000557824 TRIM26Q12899 539 aaPredicted RBP19.66■□□□□ 0.74
ISG20-204ENST00000557824 DAXXQ9UER7 740 aaPredicted RBP19.63■□□□□ 0.73
ISG20-204ENST00000557824 PPARGC1BQ86YN6 1023 aaKnown RBP19.53■□□□□ 0.72
ISG20-204ENST00000557824 RTL5Q5HYW3 569 aaPredicted RBP19.32■□□□□ 0.68
ISG20-204ENST00000557824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.28■□□□□ 0.68
ISG20-204ENST00000557824 HNRNPUL2Q1KMD3 747 aaKnown RBP19.28■□□□□ 0.68
ISG20-204ENST00000557824 POLR3GLQ9BT43 218 aa19.26■□□□□ 0.67
ISG20-204ENST00000557824 ITGAEP38570 1179 aa19.2■□□□□ 0.66
ISG20-204ENST00000557824 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
ISG20-204ENST00000557824 DIEXFQ68CQ4 756 aaKnown RBP19.16■□□□□ 0.66
ISG20-204ENST00000557824 LOC105371045A0A1W2PR82 267 aa19.1■□□□□ 0.65
ISG20-204ENST00000557824 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
ISG20-204ENST00000557824 CNGB1Q14028 1251 aaPredicted RBP19.05■□□□□ 0.64
ISG20-204ENST00000557824 CLSPNQ9HAW4 1339 aa19.02■□□□□ 0.64
ISG20-204ENST00000557824 GTF3C3Q9Y5Q9 886 aa18.97■□□□□ 0.63
ISG20-204ENST00000557824 BCANQ96GW7 911 aa18.89■□□□□ 0.62
ISG20-204ENST00000557824 CDK11AQ9UQ88 783 aaPredicted RBP18.86■□□□□ 0.61
ISG20-204ENST00000557824 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
ISG20-204ENST00000557824 ANP32CO43423 234 aa18.72■□□□□ 0.59
ISG20-204ENST00000557824 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
ISG20-204ENST00000557824 ACIN1Q9UKV3 1341 aaKnown RBP18.67■□□□□ 0.58
ISG20-204ENST00000557824 NEUROD1Q13562 356 aa18.66■□□□□ 0.58
ISG20-204ENST00000557824 TRIM52Q96A61 297 aa18.62■□□□□ 0.57
ISG20-204ENST00000557824 ESF1Q9H501 851 aaKnown RBP18.6■□□□□ 0.57
ISG20-204ENST00000557824 ANP32AP39687 249 aaKnown RBP18.58■□□□□ 0.56
ISG20-204ENST00000557824 ZBTB47Q9UFB7 747 aaPredicted RBP18.56■□□□□ 0.56
ISG20-204ENST00000557824 FBLN2P98095 1184 aa18.51■□□□□ 0.55
ISG20-204ENST00000557824 CANXP27824 592 aaKnown RBP18.48■□□□□ 0.55
ISG20-204ENST00000557824 ZNF326Q5BKZ1 582 aaKnown RBP18.43■□□□□ 0.54
ISG20-204ENST00000557824 EIF5BO60841 1220 aaKnown RBP18.43■□□□□ 0.54
ISG20-204ENST00000557824 NPM2Q86SE8 214 aaKnown RBP18.4■□□□□ 0.54
ISG20-204ENST00000557824 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
ISG20-204ENST00000557824 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
ISG20-204ENST00000557824 GLIPR1L2Q4G1C9 344 aa18.33■□□□□ 0.52
ISG20-204ENST00000557824 ANP32BQ92688 251 aaKnown RBP18.32■□□□□ 0.52
ISG20-204ENST00000557824 FKBP8Q14318 412 aa18.32■□□□□ 0.52
ISG20-204ENST00000557824 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
ISG20-204ENST00000557824 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
ISG20-204ENST00000557824 NEFMP07197 916 aa18.23■□□□□ 0.51
ISG20-204ENST00000557824 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
ISG20-204ENST00000557824 HSP90AA1P07900 732 aaKnown RBP18.15■□□□□ 0.5
ISG20-204ENST00000557824 UPF2Q9HAU5 1272 aaKnown RBP18.15■□□□□ 0.5
ISG20-204ENST00000557824 NBR1Q14596 966 aa18.12■□□□□ 0.49
ISG20-204ENST00000557824 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
ISG20-204ENST00000557824 HNRNPUQ00839 825 aaKnown RBP eCLIP18.11■□□□□ 0.49
ISG20-204ENST00000557824 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
ISG20-204ENST00000557824 TONSLQ96HA7 1378 aa18.03■□□□□ 0.48
ISG20-204ENST00000557824 CCDC136Q96JN2 1154 aa18.02■□□□□ 0.47
ISG20-204ENST00000557824 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
ISG20-204ENST00000557824 FAM9BQ8IZU0 186 aa18.01■□□□□ 0.47
ISG20-204ENST00000557824 DDX10Q13206 875 aaKnown RBP17.98■□□□□ 0.47
ISG20-204ENST00000557824 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
ISG20-204ENST00000557824 ABCC9O60706 1549 aa17.96■□□□□ 0.47
ISG20-204ENST00000557824 ARXQ96QS3 562 aa17.94■□□□□ 0.46
ISG20-204ENST00000557824 P3H3Q8IVL6 736 aa17.93■□□□□ 0.46
ISG20-204ENST00000557824 A0A0G2JS52 829 aa17.93■□□□□ 0.46
ISG20-204ENST00000557824 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.93■□□□□ 0.46
ISG20-204ENST00000557824 ZNF777Q9ULD5 760 aaPredicted RBP17.87■□□□□ 0.45
ISG20-204ENST00000557824 ARID3CA6NKF2 412 aa17.87■□□□□ 0.45
ISG20-204ENST00000557824 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
ISG20-204ENST00000557824 TMC1Q8TDI8 760 aa17.85■□□□□ 0.45
ISG20-204ENST00000557824 DDRGK1Q96HY6 314 aa17.83■□□□□ 0.45
ISG20-204ENST00000557824 CHGAP10645 457 aaKnown RBP17.82■□□□□ 0.44
ISG20-204ENST00000557824 MIER1Q8N108 512 aa17.82■□□□□ 0.44
ISG20-204ENST00000557824 ANP32EQ9BTT0 268 aa17.82■□□□□ 0.44
ISG20-204ENST00000557824 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
ISG20-204ENST00000557824 MRS2Q9HD23 443 aa17.8■□□□□ 0.44
ISG20-204ENST00000557824 HAP1P54257 671 aaPredicted RBP17.79■□□□□ 0.44
ISG20-204ENST00000557824 WDR43Q15061 677 aaKnown RBP eCLIP17.78■□□□□ 0.44
ISG20-204ENST00000557824 C14orf37Q86TY3 774 aa17.77■□□□□ 0.43
ISG20-204ENST00000557824 BECN1Q14457 450 aa17.76■□□□□ 0.43
ISG20-204ENST00000557824 TRIM44Q96DX7 344 aaPredicted RBP17.75■□□□□ 0.43
ISG20-204ENST00000557824 TNNT2P45379 298 aaPredicted RBP17.67■□□□□ 0.42
ISG20-204ENST00000557824 MYH16Q9H6N6 1097 aa17.67■□□□□ 0.42
ISG20-204ENST00000557824 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
ISG20-204ENST00000557824 NCLP19338 710 aaKnown RBP17.66■□□□□ 0.42
ISG20-204ENST00000557824 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms