RNA–Protein interactions for RNA: ENST00000557359.5

LINC00645-202, long intergenic non-protein coding RNA 645, humanhuman

TSL 1 (best)

Gene LINC00645, Length 3,484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00645-202ENST00000557359 AEBP2Q6ZN18 517 aaPredicted RBP13.63□□□□□ -0.23
LINC00645-202ENST00000557359 CHIC1Q5VXU3 224 aa12.9□□□□□ -0.34
LINC00645-202ENST00000557359 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
LINC00645-202ENST00000557359 PHF23Q9BUL5 403 aaPredicted RBP11.48□□□□□ -0.57
LINC00645-202ENST00000557359 FOXD1Q16676 465 aa10.95□□□□□ -0.66
LINC00645-202ENST00000557359 POTEDQ86YR6 584 aa10.82□□□□□ -0.68
LINC00645-202ENST00000557359 MSH5O43196 834 aa10.65□□□□□ -0.7
LINC00645-202ENST00000557359 PLPPR3Q6T4P5 718 aa9.99□□□□□ -0.81
LINC00645-202ENST00000557359 PIAS4Q8N2W9 510 aaPredicted RBP9.99□□□□□ -0.81
LINC00645-202ENST00000557359 PPP6R1Q9UPN7 881 aa9.79□□□□□ -0.84
LINC00645-202ENST00000557359 ADRA2BP18089 450 aa9.66□□□□□ -0.86
LINC00645-202ENST00000557359 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
LINC00645-202ENST00000557359 DNAJC5BQ9UF47 199 aa9.24□□□□□ -0.93
LINC00645-202ENST00000557359 SCAF1Q9H7N4 1312 aaKnown RBP9.21□□□□□ -0.94
LINC00645-202ENST00000557359 HOXD11P31277 338 aaPredicted RBP9.01□□□□□ -0.97
LINC00645-202ENST00000557359 CACNB1Q02641 598 aaPredicted RBP9□□□□□ -0.97
LINC00645-202ENST00000557359 RNF39Q9H2S5 420 aa8.99□□□□□ -0.97
LINC00645-202ENST00000557359 MAPK8IP2Q13387 824 aaPredicted RBP8.95□□□□□ -0.98
LINC00645-202ENST00000557359 C1QBPQ07021 282 aaKnown RBP8.9□□□□□ -0.98
LINC00645-202ENST00000557359 RNF216Q9NWF9 866 aaPredicted RBP8.79□□□□□ -1
LINC00645-202ENST00000557359 CNKSR2Q8WXI2 1034 aa8.69□□□□□ -1.02
LINC00645-202ENST00000557359 PPP4R3CPQ6ZMV5 832 aa8.59□□□□□ -1.03
LINC00645-202ENST00000557359 DCAF8L1A6NGE4 600 aa8.36□□□□□ -1.07
LINC00645-202ENST00000557359 POTEHQ6S545 545 aa8.36□□□□□ -1.07
LINC00645-202ENST00000557359 NCBP3Q53F19 620 aaKnown RBP8.28□□□□□ -1.08
LINC00645-202ENST00000557359 DSG3P32926 999 aa8.19□□□□□ -1.1
LINC00645-202ENST00000557359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.14□□□□□ -1.11
LINC00645-202ENST00000557359 APLP2Q06481 763 aa8.11□□□□□ -1.11
LINC00645-202ENST00000557359 U3KPZ7 1027 aaPredicted RBP8.09□□□□□ -1.11
LINC00645-202ENST00000557359 NPM3O75607 178 aaKnown RBP8.01□□□□□ -1.13
LINC00645-202ENST00000557359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.94□□□□□ -1.14
LINC00645-202ENST00000557359 HNRNPUL2Q1KMD3 747 aaKnown RBP7.94□□□□□ -1.14
LINC00645-202ENST00000557359 ZNF219Q9P2Y4 722 aaPredicted RBP7.94□□□□□ -1.14
LINC00645-202ENST00000557359 RBM42Q9BTD8 480 aaKnown RBP7.91□□□□□ -1.14
LINC00645-202ENST00000557359 SPINK5Q9NQ38 1064 aaPredicted RBP7.87□□□□□ -1.15
LINC00645-202ENST00000557359 CAPN15O75808 1086 aa7.84□□□□□ -1.15
LINC00645-202ENST00000557359 NISCHQ9Y2I1 1504 aa7.82□□□□□ -1.16
LINC00645-202ENST00000557359 SAMD1Q6SPF0 538 aaPredicted RBP7.8□□□□□ -1.16
LINC00645-202ENST00000557359 SLC4A2P04920 1241 aa7.78□□□□□ -1.16
LINC00645-202ENST00000557359 SP7Q8TDD2 431 aaPredicted RBP7.73□□□□□ -1.17
LINC00645-202ENST00000557359 CHRDL2Q6WN34 429 aa7.71□□□□□ -1.18
LINC00645-202ENST00000557359 AKT1S1Q96B36 256 aa7.69□□□□□ -1.18
LINC00645-202ENST00000557359 ZBTB12Q9Y330 459 aaPredicted RBP7.62□□□□□ -1.19
LINC00645-202ENST00000557359 FXR2P51116 673 aaKnown RBP eCLIP7.58□□□□□ -1.2
LINC00645-202ENST00000557359 MYCNP04198 464 aaPredicted RBP7.54□□□□□ -1.2
LINC00645-202ENST00000557359 TRHP20396 242 aaPredicted RBP7.53□□□□□ -1.2
LINC00645-202ENST00000557359 ABCB7O75027 752 aa7.5□□□□□ -1.21
LINC00645-202ENST00000557359 PIP4P2Q8N4L2 257 aa7.48□□□□□ -1.21
LINC00645-202ENST00000557359 REM2Q8IYK8 340 aaPredicted RBP7.44□□□□□ -1.22
LINC00645-202ENST00000557359 CLCN6P51797 869 aa7.44□□□□□ -1.22
LINC00645-202ENST00000557359 POLA2Q14181 598 aa7.4□□□□□ -1.22
LINC00645-202ENST00000557359 ATXN8OSP0DMR3 200 aa7.34□□□□□ -1.23
LINC00645-202ENST00000557359 C19orf67A6NJJ6 358 aa7.34□□□□□ -1.23
LINC00645-202ENST00000557359 KCNA4P22459 653 aa7.33□□□□□ -1.24
LINC00645-202ENST00000557359 PITPNM1O00562 1244 aa7.31□□□□□ -1.24
LINC00645-202ENST00000557359 CCDC180Q9P1Z9 1646 aa7.3□□□□□ -1.24
LINC00645-202ENST00000557359 SPDYE2BA6NHP3 402 aa7.25□□□□□ -1.25
LINC00645-202ENST00000557359 SPDYE6P0CI01 402 aa7.25□□□□□ -1.25
LINC00645-202ENST00000557359 SPDYE2Q495Y8 402 aa7.25□□□□□ -1.25
LINC00645-202ENST00000557359 HAX1O00165 279 aa7.21□□□□□ -1.26
LINC00645-202ENST00000557359 FOXD4L1Q9NU39 408 aa7.18□□□□□ -1.26
LINC00645-202ENST00000557359 LHX8Q68G74 356 aa7.17□□□□□ -1.26
LINC00645-202ENST00000557359 SSUH2Q9Y2M2 353 aa7.17□□□□□ -1.26
LINC00645-202ENST00000557359 EVX2Q03828 476 aa7.15□□□□□ -1.27
LINC00645-202ENST00000557359 SPDYE1Q8NFV5 336 aaPredicted RBP7.15□□□□□ -1.27
LINC00645-202ENST00000557359 ATF5Q9Y2D1 282 aaPredicted RBP7.14□□□□□ -1.27
LINC00645-202ENST00000557359 SHROOM4Q9ULL8 1493 aa7.13□□□□□ -1.27
LINC00645-202ENST00000557359 GABBR2O75899 941 aa7.13□□□□□ -1.27
LINC00645-202ENST00000557359 OSCARQ8IYS5 282 aa7.13□□□□□ -1.27
LINC00645-202ENST00000557359 PCDH10Q9P2E7 1040 aa7.12□□□□□ -1.27
LINC00645-202ENST00000557359 FBLN2P98095 1184 aa7.04□□□□□ -1.28
LINC00645-202ENST00000557359 PRKAR2AP13861 404 aaKnown RBP7.04□□□□□ -1.28
LINC00645-202ENST00000557359 POTEIP0CG38 1075 aa6.97□□□□□ -1.29
LINC00645-202ENST00000557359 ZNF579Q8NAF0 562 aaKnown RBP6.97□□□□□ -1.29
LINC00645-202ENST00000557359 MYO15BQ96JP2 1530 aa6.91□□□□□ -1.3
LINC00645-202ENST00000557359 MKRN4PQ13434 485 aaPredicted RBP6.91□□□□□ -1.3
LINC00645-202ENST00000557359 SLC4A1APQ9BWU0 796 aaKnown RBP6.9□□□□□ -1.3
LINC00645-202ENST00000557359 RB1CC1Q8TDY2 1594 aa6.89□□□□□ -1.31
LINC00645-202ENST00000557359 DCAF1Q9Y4B6 1507 aa6.88□□□□□ -1.31
LINC00645-202ENST00000557359 DNAJC5Q9H3Z4 198 aa6.87□□□□□ -1.31
LINC00645-202ENST00000557359 FARP1Q9Y4F1 1045 aaPredicted RBP6.85□□□□□ -1.31
LINC00645-202ENST00000557359 ZNF692Q9BU19 519 aaPredicted RBP6.85□□□□□ -1.31
LINC00645-202ENST00000557359 NACADO15069 1562 aa6.83□□□□□ -1.32
LINC00645-202ENST00000557359 PRR29P0C7W0 189 aa6.82□□□□□ -1.32
LINC00645-202ENST00000557359 CD44P16070 742 aaKnown RBP6.81□□□□□ -1.32
LINC00645-202ENST00000557359 ABCC9O60706 1549 aa6.79□□□□□ -1.32
LINC00645-202ENST00000557359 OTUD5Q96G74 571 aa6.79□□□□□ -1.32
LINC00645-202ENST00000557359 ZBTB22O15209 634 aa6.78□□□□□ -1.32
LINC00645-202ENST00000557359 STAG3Q9UJ98 1225 aa6.77□□□□□ -1.33
LINC00645-202ENST00000557359 CUX2O14529 1486 aa6.76□□□□□ -1.33
LINC00645-202ENST00000557359 MAMSTRQ6ZN01 415 aa6.75□□□□□ -1.33
LINC00645-202ENST00000557359 ASTLQ6HA08 431 aaPredicted RBP6.73□□□□□ -1.33
LINC00645-202ENST00000557359 CLEC11AQ9Y240 323 aa6.73□□□□□ -1.33
LINC00645-202ENST00000557359 CREBZFQ9NS37 354 aa6.72□□□□□ -1.33
LINC00645-202ENST00000557359 DCBLD2Q96PD2 775 aa6.71□□□□□ -1.34
LINC00645-202ENST00000557359 ZCCHC6Q5VYS8 1495 aaKnown RBP6.7□□□□□ -1.34
LINC00645-202ENST00000557359 PABPN1Q86U42 306 aaKnown RBP eCLIP6.7□□□□□ -1.34
LINC00645-202ENST00000557359 C7P10643 843 aa6.68□□□□□ -1.34
LINC00645-202ENST00000557359 SLC39A7Q92504 469 aa6.68□□□□□ -1.34
LINC00645-202ENST00000557359 UNC13AQ9UPW8 1703 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms