RNA–Protein interactions for RNA: ENST00000556022.3

NGDN-206, Transcript of neuroguidin, humanhuman

TSL 2

Gene NGDN, Length 999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-206ENST00000556022 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
NGDN-206ENST00000556022 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
NGDN-206ENST00000556022 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
NGDN-206ENST00000556022 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
NGDN-206ENST00000556022 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
NGDN-206ENST00000556022 FOXD1Q16676 465 aa16.04■□□□□ 0.16
NGDN-206ENST00000556022 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
NGDN-206ENST00000556022 ADRA2BP18089 450 aa15.41■□□□□ 0.06
NGDN-206ENST00000556022 PIAS4Q8N2W9 510 aaPredicted RBP15.07■□□□□ 0
NGDN-206ENST00000556022 MSH5O43196 834 aa14.75□□□□□ -0.05
NGDN-206ENST00000556022 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
NGDN-206ENST00000556022 POTEDQ86YR6 584 aa14.14□□□□□ -0.15
NGDN-206ENST00000556022 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
NGDN-206ENST00000556022 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
NGDN-206ENST00000556022 KCNA4P22459 653 aa13.9□□□□□ -0.18
NGDN-206ENST00000556022 CNKSR2Q8WXI2 1034 aa13.82□□□□□ -0.2
NGDN-206ENST00000556022 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
NGDN-206ENST00000556022 DMRT2Q9Y5R5 561 aa13.8□□□□□ -0.2
NGDN-206ENST00000556022 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
NGDN-206ENST00000556022 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
NGDN-206ENST00000556022 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
NGDN-206ENST00000556022 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
NGDN-206ENST00000556022 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
NGDN-206ENST00000556022 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
NGDN-206ENST00000556022 NISCHQ9Y2I1 1504 aa12.97□□□□□ -0.33
NGDN-206ENST00000556022 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
NGDN-206ENST00000556022 ZBTB22O15209 634 aa12.83□□□□□ -0.36
NGDN-206ENST00000556022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.362e-8■■■□□ 17.1
NGDN-206ENST00000556022 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
NGDN-206ENST00000556022 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
NGDN-206ENST00000556022 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
NGDN-206ENST00000556022 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
NGDN-206ENST00000556022 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
NGDN-206ENST00000556022 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
NGDN-206ENST00000556022 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
NGDN-206ENST00000556022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
NGDN-206ENST00000556022 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
NGDN-206ENST00000556022 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
NGDN-206ENST00000556022 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
NGDN-206ENST00000556022 APLP2Q06481 763 aa12.3□□□□□ -0.44
NGDN-206ENST00000556022 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
NGDN-206ENST00000556022 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
NGDN-206ENST00000556022 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
NGDN-206ENST00000556022 CAPN15O75808 1086 aa12.19□□□□□ -0.46
NGDN-206ENST00000556022 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
NGDN-206ENST00000556022 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
NGDN-206ENST00000556022 DSG3P32926 999 aa12.07□□□□□ -0.48
NGDN-206ENST00000556022 POLA2Q14181 598 aa11.98□□□□□ -0.49
NGDN-206ENST00000556022 ABCB7O75027 752 aa11.97□□□□□ -0.49
NGDN-206ENST00000556022 MKRN4PQ13434 485 aaPredicted RBP11.78□□□□□ -0.52
NGDN-206ENST00000556022 ZBTB12Q9Y330 459 aaPredicted RBP11.76□□□□□ -0.53
NGDN-206ENST00000556022 FBLN2P98095 1184 aa11.7□□□□□ -0.54
NGDN-206ENST00000556022 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
NGDN-206ENST00000556022 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
NGDN-206ENST00000556022 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
NGDN-206ENST00000556022 SPDYE2Q495Y8 402 aa11.47□□□□□ -0.57
NGDN-206ENST00000556022 SPDYE4A6NLX3 237 aa11.45□□□□□ -0.58
NGDN-206ENST00000556022 FKBP8Q14318 412 aa11.45□□□□□ -0.58
NGDN-206ENST00000556022 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
NGDN-206ENST00000556022 SSUH2Q9Y2M2 353 aa11.42□□□□□ -0.58
NGDN-206ENST00000556022 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
NGDN-206ENST00000556022 PROM2Q8N271 834 aa11.35□□□□□ -0.59
NGDN-206ENST00000556022 AKT1S1Q96B36 256 aa11.34□□□□□ -0.59
NGDN-206ENST00000556022 CCDC180Q9P1Z9 1646 aa11.31□□□□□ -0.6
NGDN-206ENST00000556022 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
NGDN-206ENST00000556022 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
NGDN-206ENST00000556022 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
NGDN-206ENST00000556022 PITPNM1O00562 1244 aa11.09□□□□□ -0.63
NGDN-206ENST00000556022 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
NGDN-206ENST00000556022 DCAF8L2P0C7V8 631 aa11.05□□□□□ -0.64
NGDN-206ENST00000556022 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
NGDN-206ENST00000556022 POTEHQ6S545 545 aa11.03□□□□□ -0.64
NGDN-206ENST00000556022 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
NGDN-206ENST00000556022 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
NGDN-206ENST00000556022 ABCC9O60706 1549 aa10.97□□□□□ -0.65
NGDN-206ENST00000556022 PRR29P0C7W0 189 aa10.95□□□□□ -0.66
NGDN-206ENST00000556022 FXR2P51116 673 aaKnown RBP eCLIP10.92□□□□□ -0.66
NGDN-206ENST00000556022 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
NGDN-206ENST00000556022 CREBZFQ9NS37 354 aa10.87□□□□□ -0.67
NGDN-206ENST00000556022 PIP4P2Q8N4L2 257 aa10.86□□□□□ -0.67
NGDN-206ENST00000556022 MIER1Q8N108 512 aa10.83□□□□□ -0.68
NGDN-206ENST00000556022 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
NGDN-206ENST00000556022 IFNLR1Q8IU57 520 aaPredicted RBP10.8□□□□□ -0.68
NGDN-206ENST00000556022 PLCD3Q8N3E9 789 aa10.8□□□□□ -0.68
NGDN-206ENST00000556022 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
NGDN-206ENST00000556022 CHADLQ6NUI6 762 aa10.79□□□□□ -0.68
NGDN-206ENST00000556022 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.69
NGDN-206ENST00000556022 MYO15BQ96JP2 1530 aa10.76□□□□□ -0.69
NGDN-206ENST00000556022 DCAF1Q9Y4B6 1507 aa10.76□□□□□ -0.69
NGDN-206ENST00000556022 NACADO15069 1562 aa10.73□□□□□ -0.69
NGDN-206ENST00000556022 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
NGDN-206ENST00000556022 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
NGDN-206ENST00000556022 ZBTB47Q9UFB7 747 aaPredicted RBP10.69□□□□□ -0.7
NGDN-206ENST00000556022 RB1CC1Q8TDY2 1594 aa10.66□□□□□ -0.7
NGDN-206ENST00000556022 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
NGDN-206ENST00000556022 NUBP1P53384 320 aa10.64□□□□□ -0.71
NGDN-206ENST00000556022 NPM1P06748 294 aaKnown RBP eCLIP10.63□□□□□ -0.71
NGDN-206ENST00000556022 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
NGDN-206ENST00000556022 RASEFQ8IZ41 740 aa10.56□□□□□ -0.72
NGDN-206ENST00000556022 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms