RNA–Protein interactions for RNA: ENST00000555411.1

NEMF-206, Transcript of nuclear export mediator factor, humanhuman

TSL 4

Gene NEMF, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-206ENST00000555411 AEBP2Q6ZN18 517 aaPredicted RBP26.33■■□□□ 1.81
NEMF-206ENST00000555411 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.66
NEMF-206ENST00000555411 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
NEMF-206ENST00000555411 PHF23Q9BUL5 403 aaPredicted RBP22.22■■□□□ 1.15
NEMF-206ENST00000555411 FOXD1Q16676 465 aa20.88■□□□□ 0.93
NEMF-206ENST00000555411 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
NEMF-206ENST00000555411 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
NEMF-206ENST00000555411 ADRA2BP18089 450 aa19.61■□□□□ 0.73
NEMF-206ENST00000555411 MSH5O43196 834 aa19.58■□□□□ 0.72
NEMF-206ENST00000555411 PIAS4Q8N2W9 510 aaPredicted RBP19.58■□□□□ 0.72
NEMF-206ENST00000555411 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
NEMF-206ENST00000555411 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
NEMF-206ENST00000555411 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
NEMF-206ENST00000555411 MAPK8IP2Q13387 824 aaPredicted RBP17.89■□□□□ 0.45
NEMF-206ENST00000555411 PPP4R3CPQ6ZMV5 832 aa17.88■□□□□ 0.45
NEMF-206ENST00000555411 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
NEMF-206ENST00000555411 HOXD11P31277 338 aaPredicted RBP17.41■□□□□ 0.38
NEMF-206ENST00000555411 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
NEMF-206ENST00000555411 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
NEMF-206ENST00000555411 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
NEMF-206ENST00000555411 NISCHQ9Y2I1 1504 aa17.01■□□□□ 0.31
NEMF-206ENST00000555411 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
NEMF-206ENST00000555411 DNAJC5BQ9UF47 199 aa16.94■□□□□ 0.3
NEMF-206ENST00000555411 KCNA4P22459 653 aa16.88■□□□□ 0.29
NEMF-206ENST00000555411 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
NEMF-206ENST00000555411 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
NEMF-206ENST00000555411 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
NEMF-206ENST00000555411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.232e-8■■□□□ 12.1
NEMF-206ENST00000555411 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
NEMF-206ENST00000555411 U3KPZ7 1027 aaPredicted RBP16.17■□□□□ 0.18
NEMF-206ENST00000555411 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
NEMF-206ENST00000555411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
NEMF-206ENST00000555411 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
NEMF-206ENST00000555411 APLP2Q06481 763 aa15.95■□□□□ 0.14
NEMF-206ENST00000555411 SAMD1Q6SPF0 538 aaPredicted RBP15.86■□□□□ 0.13
NEMF-206ENST00000555411 MYCNP04198 464 aaPredicted RBP15.82■□□□□ 0.12
NEMF-206ENST00000555411 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
NEMF-206ENST00000555411 SPINK5Q9NQ38 1064 aaPredicted RBP15.77■□□□□ 0.12
NEMF-206ENST00000555411 CAPN15O75808 1086 aa15.76■□□□□ 0.11
NEMF-206ENST00000555411 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.11
NEMF-206ENST00000555411 DSG3P32926 999 aa15.68■□□□□ 0.1
NEMF-206ENST00000555411 TRHP20396 242 aaPredicted RBP15.55■□□□□ 0.08
NEMF-206ENST00000555411 ZBTB22O15209 634 aa15.5■□□□□ 0.07
NEMF-206ENST00000555411 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
NEMF-206ENST00000555411 ABCB7O75027 752 aa15.35■□□□□ 0.05
NEMF-206ENST00000555411 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
NEMF-206ENST00000555411 POLA2Q14181 598 aa15.24■□□□□ 0.03
NEMF-206ENST00000555411 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
NEMF-206ENST00000555411 CCDC180Q9P1Z9 1646 aa15.08■□□□□ 0
NEMF-206ENST00000555411 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
NEMF-206ENST00000555411 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
NEMF-206ENST00000555411 EHMT2Q96KQ7 1210 aa14.91□□□□□ -0.02
NEMF-206ENST00000555411 FBLN2P98095 1184 aa14.8□□□□□ -0.04
NEMF-206ENST00000555411 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
NEMF-206ENST00000555411 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
NEMF-206ENST00000555411 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
NEMF-206ENST00000555411 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
NEMF-206ENST00000555411 SPDYE2Q495Y8 402 aa14.65□□□□□ -0.06
NEMF-206ENST00000555411 ABCC9O60706 1549 aa14.63□□□□□ -0.07
NEMF-206ENST00000555411 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
NEMF-206ENST00000555411 POTEHQ6S545 545 aa14.57□□□□□ -0.08
NEMF-206ENST00000555411 CHRDL2Q6WN34 429 aa14.52□□□□□ -0.09
NEMF-206ENST00000555411 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
NEMF-206ENST00000555411 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
NEMF-206ENST00000555411 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
NEMF-206ENST00000555411 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
NEMF-206ENST00000555411 SPDYE1Q8NFV5 336 aaPredicted RBP14.3□□□□□ -0.12
NEMF-206ENST00000555411 DCAF8L2P0C7V8 631 aa14.23□□□□□ -0.13
NEMF-206ENST00000555411 FXR2P51116 673 aaKnown RBP eCLIP14.23□□□□□ -0.13
NEMF-206ENST00000555411 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
NEMF-206ENST00000555411 NACADO15069 1562 aa14.21□□□□□ -0.14
NEMF-206ENST00000555411 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
NEMF-206ENST00000555411 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
NEMF-206ENST00000555411 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
NEMF-206ENST00000555411 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
NEMF-206ENST00000555411 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
NEMF-206ENST00000555411 SPDYE4A6NLX3 237 aa14.11□□□□□ -0.15
NEMF-206ENST00000555411 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
NEMF-206ENST00000555411 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
NEMF-206ENST00000555411 PRR29P0C7W0 189 aa14□□□□□ -0.17
NEMF-206ENST00000555411 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
NEMF-206ENST00000555411 PROM2Q8N271 834 aa13.93□□□□□ -0.18
NEMF-206ENST00000555411 HAX1O00165 279 aa13.84□□□□□ -0.19
NEMF-206ENST00000555411 SP7Q8TDD2 431 aaPredicted RBP13.82□□□□□ -0.2
NEMF-206ENST00000555411 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
NEMF-206ENST00000555411 C19orf67A6NJJ6 358 aa13.76□□□□□ -0.21
NEMF-206ENST00000555411 FARP1Q9Y4F1 1045 aaPredicted RBP13.73□□□□□ -0.21
NEMF-206ENST00000555411 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
NEMF-206ENST00000555411 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
NEMF-206ENST00000555411 SCRIBQ14160 1630 aa13.7□□□□□ -0.22
NEMF-206ENST00000555411 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
NEMF-206ENST00000555411 BICRAQ9NZM4 1560 aa13.63□□□□□ -0.23
NEMF-206ENST00000555411 FKBP8Q14318 412 aa13.63□□□□□ -0.23
NEMF-206ENST00000555411 EVX2Q03828 476 aa13.62□□□□□ -0.23
NEMF-206ENST00000555411 CLCN6P51797 869 aa13.58□□□□□ -0.24
NEMF-206ENST00000555411 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
NEMF-206ENST00000555411 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
NEMF-206ENST00000555411 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
NEMF-206ENST00000555411 PLEKHG5O94827 1062 aa13.5□□□□□ -0.25
NEMF-206ENST00000555411 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms