RNA–Protein interactions for RNA: ENST00000554732.5

LINC00639-202, long intergenic non-protein coding RNA 639, humanhuman

TSL 1 (best)

Gene LINC00639, Length 4,364 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-202ENST00000554732 NISCHQ9Y2I1 1504 aa23.71■■□□□ 1.39
LINC00639-202ENST00000554732 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
LINC00639-202ENST00000554732 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
LINC00639-202ENST00000554732 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
LINC00639-202ENST00000554732 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
LINC00639-202ENST00000554732 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
LINC00639-202ENST00000554732 HRCP23327 699 aa21.96■■□□□ 1.11
LINC00639-202ENST00000554732 MYT1Q01538 1121 aa21.85■■□□□ 1.09
LINC00639-202ENST00000554732 PPARGC1BQ86YN6 1023 aaKnown RBP21.84■■□□□ 1.09
LINC00639-202ENST00000554732 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
LINC00639-202ENST00000554732 CENPBP07199 599 aaPredicted RBP21.55■■□□□ 1.04
LINC00639-202ENST00000554732 ZEB1P37275 1124 aaPredicted RBP21.39■■□□□ 1.01
LINC00639-202ENST00000554732 YTHDC1Q96MU7 727 aaKnown RBP21.3■■□□□ 1
LINC00639-202ENST00000554732 FAM9AQ8IZU1 332 aaPredicted RBP21.25■□□□□ 0.99
LINC00639-202ENST00000554732 TTBK1Q5TCY1 1321 aaPredicted RBP21.21■□□□□ 0.99
LINC00639-202ENST00000554732 CCER1Q8TC90 406 aaPredicted RBP21.16■□□□□ 0.98
LINC00639-202ENST00000554732 TRIM26Q12899 539 aaPredicted RBP21.08■□□□□ 0.96
LINC00639-202ENST00000554732 LOC105371045A0A1W2PR82 267 aa20.97■□□□□ 0.95
LINC00639-202ENST00000554732 GTF3C3Q9Y5Q9 886 aa20.93■□□□□ 0.94
LINC00639-202ENST00000554732 ERICH6Q7L0X2 663 aa20.88■□□□□ 0.93
LINC00639-202ENST00000554732 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
LINC00639-202ENST00000554732 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
LINC00639-202ENST00000554732 ACIN1Q9UKV3 1341 aaKnown RBP20.66■□□□□ 0.9
LINC00639-202ENST00000554732 DIEXFQ68CQ4 756 aaKnown RBP20.66■□□□□ 0.9
LINC00639-202ENST00000554732 TRIM41Q8WV44 630 aa20.62■□□□□ 0.89
LINC00639-202ENST00000554732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.88
LINC00639-202ENST00000554732 NEUROD1Q13562 356 aa20.46■□□□□ 0.87
LINC00639-202ENST00000554732 APLP2Q06481 763 aa20.45■□□□□ 0.86
LINC00639-202ENST00000554732 NEFLP07196 543 aa20.44■□□□□ 0.86
LINC00639-202ENST00000554732 RANGAP1P46060 587 aaPredicted RBP20.26■□□□□ 0.83
LINC00639-202ENST00000554732 BCANQ96GW7 911 aa20.23■□□□□ 0.83
LINC00639-202ENST00000554732 ABCC9O60706 1549 aa20.12■□□□□ 0.81
LINC00639-202ENST00000554732 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
LINC00639-202ENST00000554732 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.81
LINC00639-202ENST00000554732 ZNF316A6NFI3 1004 aaPredicted RBP19.97■□□□□ 0.79
LINC00639-202ENST00000554732 BCL11AQ9H165 835 aa19.85■□□□□ 0.77
LINC00639-202ENST00000554732 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
LINC00639-202ENST00000554732 RTL5Q5HYW3 569 aaPredicted RBP19.8■□□□□ 0.76
LINC00639-202ENST00000554732 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
LINC00639-202ENST00000554732 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
LINC00639-202ENST00000554732 ANP32EQ9BTT0 268 aa19.74■□□□□ 0.75
LINC00639-202ENST00000554732 ITGAEP38570 1179 aa19.74■□□□□ 0.75
LINC00639-202ENST00000554732 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
LINC00639-202ENST00000554732 MIER1Q8N108 512 aa19.69■□□□□ 0.74
LINC00639-202ENST00000554732 FKBP8Q14318 412 aa19.64■□□□□ 0.73
LINC00639-202ENST00000554732 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
LINC00639-202ENST00000554732 CDK11AQ9UQ88 783 aaPredicted RBP19.61■□□□□ 0.73
LINC00639-202ENST00000554732 CNGB1Q14028 1251 aaPredicted RBP19.59■□□□□ 0.73
LINC00639-202ENST00000554732 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.73
LINC00639-202ENST00000554732 EIF5BO60841 1220 aaKnown RBP19.57■□□□□ 0.72
LINC00639-202ENST00000554732 DAXXQ9UER7 740 aaPredicted RBP19.53■□□□□ 0.72
LINC00639-202ENST00000554732 NBR1Q14596 966 aa19.44■□□□□ 0.7
LINC00639-202ENST00000554732 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
LINC00639-202ENST00000554732 CLSPNQ9HAW4 1339 aa19.41■□□□□ 0.7
LINC00639-202ENST00000554732 POLR3GLQ9BT43 218 aa19.36■□□□□ 0.69
LINC00639-202ENST00000554732 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
LINC00639-202ENST00000554732 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.69
LINC00639-202ENST00000554732 ANP32CO43423 234 aa19.29■□□□□ 0.68
LINC00639-202ENST00000554732 TRIM52Q96A61 297 aa19.29■□□□□ 0.68
LINC00639-202ENST00000554732 IRX6P78412 446 aaPredicted RBP19.23■□□□□ 0.67
LINC00639-202ENST00000554732 NPM2Q86SE8 214 aaKnown RBP19.22■□□□□ 0.67
LINC00639-202ENST00000554732 ANP32AP39687 249 aaKnown RBP19.2■□□□□ 0.66
LINC00639-202ENST00000554732 RTN4Q9NQC3 1192 aaKnown RBP19.2■□□□□ 0.66
LINC00639-202ENST00000554732 DDX10Q13206 875 aaKnown RBP19.18■□□□□ 0.66
LINC00639-202ENST00000554732 MYT1LQ9UL68 1186 aa19.18■□□□□ 0.66
LINC00639-202ENST00000554732 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
LINC00639-202ENST00000554732 HNRNPUQ00839 825 aaKnown RBP eCLIP19.09■□□□□ 0.65
LINC00639-202ENST00000554732 RBM19Q9Y4C8 960 aaKnown RBP19.08■□□□□ 0.64
LINC00639-202ENST00000554732 DEKP35659 375 aaKnown RBP19.02■□□□□ 0.64
LINC00639-202ENST00000554732 ZBTB47Q9UFB7 747 aaPredicted RBP19.02■□□□□ 0.64
LINC00639-202ENST00000554732 FAM50AQ14320 339 aaKnown RBP18.99■□□□□ 0.63
LINC00639-202ENST00000554732 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
LINC00639-202ENST00000554732 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
LINC00639-202ENST00000554732 NACADO15069 1562 aa18.91■□□□□ 0.62
LINC00639-202ENST00000554732 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.9■□□□□ 0.62
LINC00639-202ENST00000554732 GLIPR1L2Q4G1C9 344 aa18.89■□□□□ 0.62
LINC00639-202ENST00000554732 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
LINC00639-202ENST00000554732 FAM9BQ8IZU0 186 aa18.87■□□□□ 0.61
LINC00639-202ENST00000554732 CCDC136Q96JN2 1154 aa18.85■□□□□ 0.61
LINC00639-202ENST00000554732 ARXQ96QS3 562 aa18.83■□□□□ 0.6
LINC00639-202ENST00000554732 PRKCSHP14314 528 aaPredicted RBP18.81■□□□□ 0.6
LINC00639-202ENST00000554732 NOP58Q9Y2X3 529 aaKnown RBP18.76■□□□□ 0.59
LINC00639-202ENST00000554732 LAS1LQ9Y4W2 734 aaKnown RBP18.73■□□□□ 0.59
LINC00639-202ENST00000554732 NEFMP07197 916 aa18.7■□□□□ 0.58
LINC00639-202ENST00000554732 SENP3-EIF4A1A0A087X0R7 540 aa18.7■□□□□ 0.58
LINC00639-202ENST00000554732 B4GALNT3Q6L9W6 998 aa18.69■□□□□ 0.58
LINC00639-202ENST00000554732 SALL2Q9Y467 1007 aaPredicted RBP18.67■□□□□ 0.58
LINC00639-202ENST00000554732 CECR2Q9BXF3 1484 aa18.66■□□□□ 0.58
LINC00639-202ENST00000554732 ZNF326Q5BKZ1 582 aaKnown RBP18.66■□□□□ 0.58
LINC00639-202ENST00000554732 ANO8Q9HCE9 1232 aaPredicted RBP18.62■□□□□ 0.57
LINC00639-202ENST00000554732 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
LINC00639-202ENST00000554732 MRS2Q9HD23 443 aa18.6■□□□□ 0.57
LINC00639-202ENST00000554732 P3H3Q8IVL6 736 aa18.57■□□□□ 0.56
LINC00639-202ENST00000554732 PPP4R2Q9NY27 417 aa18.57■□□□□ 0.56
LINC00639-202ENST00000554732 FBLN2P98095 1184 aa18.56■□□□□ 0.56
LINC00639-202ENST00000554732 TONSLQ96HA7 1378 aa18.52■□□□□ 0.56
LINC00639-202ENST00000554732 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
LINC00639-202ENST00000554732 CEP162Q5TB80 1403 aa18.48■□□□□ 0.55
LINC00639-202ENST00000554732 ERICH6BQ5W0A0 696 aa18.45■□□□□ 0.54
LINC00639-202ENST00000554732 NAP1L5Q96NT1 182 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms