RNA–Protein interactions for RNA: ENST00000550788.1

NAV3-211, Transcript of neuron navigator 3, humanhuman

TSL 2

Gene NAV3, Length 2,398 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAV3-211ENST00000550788 CHIC1Q5VXU3 224 aa12.42□□□□□ -0.42
NAV3-211ENST00000550788 AEBP2Q6ZN18 517 aaPredicted RBP12.42□□□□□ -0.42
NAV3-211ENST00000550788 PHF23Q9BUL5 403 aaPredicted RBP11.15□□□□□ -0.62
NAV3-211ENST00000550788 PLPPR3Q6T4P5 718 aa10.26□□□□□ -0.77
NAV3-211ENST00000550788 SENP3Q9H4L4 574 aaPredicted RBP10.21□□□□□ -0.77
NAV3-211ENST00000550788 NISCHQ9Y2I1 1504 aa10.17□□□□□ -0.78
NAV3-211ENST00000550788 ADRA2BP18089 450 aa9.89□□□□□ -0.83
NAV3-211ENST00000550788 PPP6R1Q9UPN7 881 aa9.74□□□□□ -0.85
NAV3-211ENST00000550788 EHMT2Q96KQ7 1210 aa9.7□□□□□ -0.86
NAV3-211ENST00000550788 KCNA4P22459 653 aa9.67□□□□□ -0.86
NAV3-211ENST00000550788 FOXD1Q16676 465 aa9.59□□□□□ -0.87
NAV3-211ENST00000550788 CSRNP3Q8WYN3 585 aa9.26□□□□□ -0.93
NAV3-211ENST00000550788 PPP4R3CPQ6ZMV5 832 aa9.19□□□□□ -0.94
NAV3-211ENST00000550788 SLC4A1APQ9BWU0 796 aaKnown RBP9.19□□□□□ -0.94
NAV3-211ENST00000550788 PIAS4Q8N2W9 510 aaPredicted RBP9.15□□□□□ -0.95
NAV3-211ENST00000550788 NPM3O75607 178 aaKnown RBP9.01□□□□□ -0.97
NAV3-211ENST00000550788 ZBTB22O15209 634 aa8.97□□□□□ -0.97
NAV3-211ENST00000550788 NCBP3Q53F19 620 aaKnown RBP8.93□□□□□ -0.98
NAV3-211ENST00000550788 CCDC180Q9P1Z9 1646 aa8.78□□□□□ -1
NAV3-211ENST00000550788 MAPK8IP2Q13387 824 aaPredicted RBP8.74□□□□□ -1.01
NAV3-211ENST00000550788 CNKSR2Q8WXI2 1034 aa8.73□□□□□ -1.01
NAV3-211ENST00000550788 FOXD4L1Q9NU39 408 aa8.59□□□□□ -1.03
NAV3-211ENST00000550788 SCAF1Q9H7N4 1312 aaKnown RBP8.59□□□□□ -1.04
NAV3-211ENST00000550788 ZCCHC6Q5VYS8 1495 aaKnown RBP8.55□□□□□ -1.04
NAV3-211ENST00000550788 RTN4Q9NQC3 1192 aaKnown RBP8.55□□□□□ -1.04
NAV3-211ENST00000550788 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
NAV3-211ENST00000550788 MSH5O43196 834 aa8.43□□□□□ -1.06
NAV3-211ENST00000550788 SLC24A1O60721 1099 aa8.43□□□□□ -1.06
NAV3-211ENST00000550788 RNF216Q9NWF9 866 aaPredicted RBP8.43□□□□□ -1.06
NAV3-211ENST00000550788 SLC4A2P04920 1241 aa8.42□□□□□ -1.06
NAV3-211ENST00000550788 DCAF1Q9Y4B6 1507 aa8.4□□□□□ -1.06
NAV3-211ENST00000550788 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
NAV3-211ENST00000550788 DNAJC5BQ9UF47 199 aa8.36□□□□□ -1.07
NAV3-211ENST00000550788 FKBP8Q14318 412 aa8.33□□□□□ -1.08
NAV3-211ENST00000550788 ABCC9O60706 1549 aa8.31□□□□□ -1.08
NAV3-211ENST00000550788 AMER1Q5JTC6 1135 aaPredicted RBP8.3□□□□□ -1.08
NAV3-211ENST00000550788 MYO15BQ96JP2 1530 aa8.28□□□□□ -1.08
NAV3-211ENST00000550788 HOXD11P31277 338 aaPredicted RBP8.27□□□□□ -1.09
NAV3-211ENST00000550788 DMRT2Q9Y5R5 561 aa8.26□□□□□ -1.09
NAV3-211ENST00000550788 NACADO15069 1562 aa8.2□□□□□ -1.1
NAV3-211ENST00000550788 ATF5Q9Y2D1 282 aaPredicted RBP8.19□□□□□ -1.1
NAV3-211ENST00000550788 MYCNP04198 464 aaPredicted RBP8.18□□□□□ -1.1
NAV3-211ENST00000550788 SUPT5HO00267 1087 aaKnown RBP8.12□□□□□ -1.11
NAV3-211ENST00000550788 SCRIBQ14160 1630 aa8.12□□□□□ -1.11
NAV3-211ENST00000550788 RB1CC1Q8TDY2 1594 aa8.11□□□□□ -1.11
NAV3-211ENST00000550788 ATXN8OSP0DMR3 200 aa8.1□□□□□ -1.11
NAV3-211ENST00000550788 DCAF8L1A6NGE4 600 aa8.05□□□□□ -1.12
NAV3-211ENST00000550788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.96□□□□□ -1.14
NAV3-211ENST00000550788 RSF1Q96T23 1441 aaPredicted RBP7.94□□□□□ -1.14
NAV3-211ENST00000550788 U3KPZ7 1027 aaPredicted RBP7.93□□□□□ -1.14
NAV3-211ENST00000550788 CECR2Q9BXF3 1484 aa7.91□□□□□ -1.14
NAV3-211ENST00000550788 PABPN1Q86U42 306 aaKnown RBP eCLIP7.89□□□□□ -1.15
NAV3-211ENST00000550788 UNC13AQ9UPW8 1703 aa7.88□□□□□ -1.15
NAV3-211ENST00000550788 MROH2BQ7Z745 1585 aa7.86□□□□□ -1.15
NAV3-211ENST00000550788 BICRAQ9NZM4 1560 aa7.85□□□□□ -1.15
NAV3-211ENST00000550788 BAZ1AQ9NRL2 1556 aaPredicted RBP7.84□□□□□ -1.15
NAV3-211ENST00000550788 SAMD1Q6SPF0 538 aaPredicted RBP7.81□□□□□ -1.16
NAV3-211ENST00000550788 ZNF219Q9P2Y4 722 aaPredicted RBP7.81□□□□□ -1.16
NAV3-211ENST00000550788 SMARCA4P51532 1647 aa7.78□□□□□ -1.16
NAV3-211ENST00000550788 MKRN4PQ13434 485 aaPredicted RBP7.78□□□□□ -1.16
NAV3-211ENST00000550788 WIZO95785 1651 aa7.77□□□□□ -1.17
NAV3-211ENST00000550788 SPDYE4A6NLX3 237 aa7.76□□□□□ -1.17
NAV3-211ENST00000550788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.76□□□□□ -1.17
NAV3-211ENST00000550788 HNRNPUL2Q1KMD3 747 aaKnown RBP7.76□□□□□ -1.17
NAV3-211ENST00000550788 PLCB2Q00722 1185 aa7.75□□□□□ -1.17
NAV3-211ENST00000550788 IFNLR1Q8IU57 520 aaPredicted RBP7.72□□□□□ -1.17
NAV3-211ENST00000550788 PRKCSHP14314 528 aaPredicted RBP7.71□□□□□ -1.17
NAV3-211ENST00000550788 TOP2AP11388 1531 aaKnown RBP7.71□□□□□ -1.18
NAV3-211ENST00000550788 HAP1P54257 671 aaPredicted RBP7.7□□□□□ -1.18
NAV3-211ENST00000550788 VASPP50552 380 aaPredicted RBP7.69□□□□□ -1.18
NAV3-211ENST00000550788 PEG3Q9GZU2 1588 aa7.69□□□□□ -1.18
NAV3-211ENST00000550788 FBXO3Q9UK99 471 aa7.67□□□□□ -1.18
NAV3-211ENST00000550788 ATAD2BQ9ULI0 1458 aa7.67□□□□□ -1.18
NAV3-211ENST00000550788 SPINK5Q9NQ38 1064 aaPredicted RBP7.66□□□□□ -1.18
NAV3-211ENST00000550788 SMARCA2P51531 1590 aa7.65□□□□□ -1.18
NAV3-211ENST00000550788 CCDC88BA6NC98 1476 aa7.65□□□□□ -1.18
NAV3-211ENST00000550788 TRHP20396 242 aaPredicted RBP7.64□□□□□ -1.19
NAV3-211ENST00000550788 PKD2Q13563 968 aa7.64□□□□□ -1.19
NAV3-211ENST00000550788 TRIM41Q8WV44 630 aa7.63□□□□□ -1.19
NAV3-211ENST00000550788 BAZ1BQ9UIG0 1483 aaKnown RBP7.63□□□□□ -1.19
NAV3-211ENST00000550788 EIF4G1Q04637 1599 aaKnown RBP7.63□□□□□ -1.19
NAV3-211ENST00000550788 PROM2Q8N271 834 aa7.62□□□□□ -1.19
NAV3-211ENST00000550788 POLA2Q14181 598 aa7.61□□□□□ -1.19
NAV3-211ENST00000550788 NCAPD3P42695 1498 aa7.6□□□□□ -1.19
NAV3-211ENST00000550788 HMGXB3Q12766 1538 aa7.56□□□□□ -1.2
NAV3-211ENST00000550788 FBLN2P98095 1184 aa7.56□□□□□ -1.2
NAV3-211ENST00000550788 NPM1P06748 294 aaKnown RBP eCLIP7.54□□□□□ -1.2
NAV3-211ENST00000550788 KDM2AQ9Y2K7 1162 aa7.54□□□□□ -1.2
NAV3-211ENST00000550788 LOC105371045A0A1W2PR82 267 aa7.51□□□□□ -1.21
NAV3-211ENST00000550788 ABCB7O75027 752 aa7.51□□□□□ -1.21
NAV3-211ENST00000550788 CAPN15O75808 1086 aa7.51□□□□□ -1.21
NAV3-211ENST00000550788 TAOK2Q9UL54 1235 aa7.51□□□□□ -1.21
NAV3-211ENST00000550788 ABCC8Q09428 1581 aa7.5□□□□□ -1.21
NAV3-211ENST00000550788 FAM9AQ8IZU1 332 aaPredicted RBP7.49□□□□□ -1.21
NAV3-211ENST00000550788 CC2D2AQ9P2K1 1620 aa7.49□□□□□ -1.21
NAV3-211ENST00000550788 BCANQ96GW7 911 aa7.49□□□□□ -1.21
NAV3-211ENST00000550788 CFAP44Q96MT7 982 aa7.48□□□□□ -1.21
NAV3-211ENST00000550788 WRNQ14191 1432 aaPredicted RBP eCLIP7.47□□□□□ -1.21
NAV3-211ENST00000550788 PAXIP1Q6ZW49 1069 aaPredicted RBP7.47□□□□□ -1.21
NAV3-211ENST00000550788 KLHL34Q8N239 644 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms