RNA–Protein interactions for RNA: ENST00000550368.1

FGD6-206, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 3

Gene FGD6, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-206ENST00000550368 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.61
FGD6-206ENST00000550368 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
FGD6-206ENST00000550368 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
FGD6-206ENST00000550368 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
FGD6-206ENST00000550368 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
FGD6-206ENST00000550368 FOXD1Q16676 465 aa19.66■□□□□ 0.74
FGD6-206ENST00000550368 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
FGD6-206ENST00000550368 ADRA2BP18089 450 aa19.04■□□□□ 0.64
FGD6-206ENST00000550368 PIAS4Q8N2W9 510 aaPredicted RBP18.53■□□□□ 0.56
FGD6-206ENST00000550368 MSH5O43196 834 aa18.04■□□□□ 0.48
FGD6-206ENST00000550368 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
FGD6-206ENST00000550368 KCNA4P22459 653 aa17.65■□□□□ 0.42
FGD6-206ENST00000550368 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
FGD6-206ENST00000550368 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
FGD6-206ENST00000550368 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
FGD6-206ENST00000550368 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
FGD6-206ENST00000550368 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
FGD6-206ENST00000550368 DMRT2Q9Y5R5 561 aa17.02■□□□□ 0.32
FGD6-206ENST00000550368 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
FGD6-206ENST00000550368 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
FGD6-206ENST00000550368 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
FGD6-206ENST00000550368 HOXD11P31277 338 aaPredicted RBP16.81■□□□□ 0.28
FGD6-206ENST00000550368 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
FGD6-206ENST00000550368 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
FGD6-206ENST00000550368 ZBTB22O15209 634 aa16.3■□□□□ 0.2
FGD6-206ENST00000550368 NISCHQ9Y2I1 1504 aa16.23■□□□□ 0.19
FGD6-206ENST00000550368 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
FGD6-206ENST00000550368 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
FGD6-206ENST00000550368 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
FGD6-206ENST00000550368 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
FGD6-206ENST00000550368 MYCNP04198 464 aaPredicted RBP15.86■□□□□ 0.13
FGD6-206ENST00000550368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
FGD6-206ENST00000550368 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
FGD6-206ENST00000550368 ATXN8OSP0DMR3 200 aa15.7■□□□□ 0.1
FGD6-206ENST00000550368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
FGD6-206ENST00000550368 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
FGD6-206ENST00000550368 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
FGD6-206ENST00000550368 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
FGD6-206ENST00000550368 ATF5Q9Y2D1 282 aaPredicted RBP15.39■□□□□ 0.05
FGD6-206ENST00000550368 APLP2Q06481 763 aa15.35■□□□□ 0.05
FGD6-206ENST00000550368 C1QBPQ07021 282 aaKnown RBP15.33■□□□□ 0.04
FGD6-206ENST00000550368 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
FGD6-206ENST00000550368 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
FGD6-206ENST00000550368 CAPN15O75808 1086 aa14.99□□□□□ -0.01
FGD6-206ENST00000550368 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.01
FGD6-206ENST00000550368 POLA2Q14181 598 aa14.85□□□□□ -0.03
FGD6-206ENST00000550368 DSG3P32926 999 aa14.82□□□□□ -0.04
FGD6-206ENST00000550368 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
FGD6-206ENST00000550368 CACNB1Q02641 598 aaPredicted RBP14.76□□□□□ -0.05
FGD6-206ENST00000550368 ABCB7O75027 752 aa14.72□□□□□ -0.05
FGD6-206ENST00000550368 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.05
FGD6-206ENST00000550368 FKBP8Q14318 412 aa14.7□□□□□ -0.06
FGD6-206ENST00000550368 FBLN2P98095 1184 aa14.68□□□□□ -0.06
FGD6-206ENST00000550368 PROM2Q8N271 834 aa14.5□□□□□ -0.09
FGD6-206ENST00000550368 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
FGD6-206ENST00000550368 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
FGD6-206ENST00000550368 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
FGD6-206ENST00000550368 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
FGD6-206ENST00000550368 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
FGD6-206ENST00000550368 SSUH2Q9Y2M2 353 aa14.31□□□□□ -0.12
FGD6-206ENST00000550368 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
FGD6-206ENST00000550368 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
FGD6-206ENST00000550368 CCDC180Q9P1Z9 1646 aa14.13□□□□□ -0.15
FGD6-206ENST00000550368 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
FGD6-206ENST00000550368 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
FGD6-206ENST00000550368 AKT1S1Q96B36 256 aa14□□□□□ -0.17
FGD6-206ENST00000550368 VASPP50552 380 aaPredicted RBP13.98□□□□□ -0.17
FGD6-206ENST00000550368 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
FGD6-206ENST00000550368 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
FGD6-206ENST00000550368 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
FGD6-206ENST00000550368 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
FGD6-206ENST00000550368 IFNLR1Q8IU57 520 aaPredicted RBP13.82□□□□□ -0.2
FGD6-206ENST00000550368 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
FGD6-206ENST00000550368 ABCC9O60706 1549 aa13.8□□□□□ -0.2
FGD6-206ENST00000550368 ZCCHC6Q5VYS8 1495 aaKnown RBP13.69□□□□□ -0.22
FGD6-206ENST00000550368 PITPNM1O00562 1244 aa13.67□□□□□ -0.22
FGD6-206ENST00000550368 MIER1Q8N108 512 aa13.63□□□□□ -0.23
FGD6-206ENST00000550368 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
FGD6-206ENST00000550368 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
FGD6-206ENST00000550368 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
FGD6-206ENST00000550368 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
FGD6-206ENST00000550368 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
FGD6-206ENST00000550368 CREBZFQ9NS37 354 aa13.56□□□□□ -0.24
FGD6-206ENST00000550368 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
FGD6-206ENST00000550368 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
FGD6-206ENST00000550368 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
FGD6-206ENST00000550368 DCAF1Q9Y4B6 1507 aa13.52□□□□□ -0.25
FGD6-206ENST00000550368 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
FGD6-206ENST00000550368 PKD2Q13563 968 aa13.49□□□□□ -0.25
FGD6-206ENST00000550368 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
FGD6-206ENST00000550368 NUBP1P53384 320 aa13.41□□□□□ -0.26
FGD6-206ENST00000550368 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
FGD6-206ENST00000550368 MYO15BQ96JP2 1530 aa13.3□□□□□ -0.28
FGD6-206ENST00000550368 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
FGD6-206ENST00000550368 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
FGD6-206ENST00000550368 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
FGD6-206ENST00000550368 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
FGD6-206ENST00000550368 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
FGD6-206ENST00000550368 GSE1Q14687 1217 aa13.27□□□□□ -0.29
FGD6-206ENST00000550368 FARP1Q9Y4F1 1045 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms