RNA–Protein interactions for RNA: ENST00000549342.1

RACGAP1-217, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 5

Gene RACGAP1, Length 841 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-217ENST00000549342 AEBP2Q6ZN18 517 aaPredicted RBP16.28■□□□□ 0.2
RACGAP1-217ENST00000549342 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
RACGAP1-217ENST00000549342 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
RACGAP1-217ENST00000549342 SENP3Q9H4L4 574 aaPredicted RBP13.91□□□□□ -0.18
RACGAP1-217ENST00000549342 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
RACGAP1-217ENST00000549342 FOXD1Q16676 465 aa12.81□□□□□ -0.36
RACGAP1-217ENST00000549342 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
RACGAP1-217ENST00000549342 NISCHQ9Y2I1 1504 aa12.7□□□□□ -0.38
RACGAP1-217ENST00000549342 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
RACGAP1-217ENST00000549342 ADRA2BP18089 450 aa12.42□□□□□ -0.42
RACGAP1-217ENST00000549342 PPP6R1Q9UPN7 881 aa12.37□□□□□ -0.43
RACGAP1-217ENST00000549342 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
RACGAP1-217ENST00000549342 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
RACGAP1-217ENST00000549342 MSH5O43196 834 aa11.86□□□□□ -0.51
RACGAP1-217ENST00000549342 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
RACGAP1-217ENST00000549342 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
RACGAP1-217ENST00000549342 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
RACGAP1-217ENST00000549342 KCNA4P22459 653 aa11.59□□□□□ -0.55
RACGAP1-217ENST00000549342 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
RACGAP1-217ENST00000549342 ABCC9O60706 1549 aa11.56□□□□□ -0.56
RACGAP1-217ENST00000549342 SCAF1Q9H7N4 1312 aaKnown RBP11.47□□□□□ -0.57
RACGAP1-217ENST00000549342 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
RACGAP1-217ENST00000549342 CCDC180Q9P1Z9 1646 aa11.39□□□□□ -0.59
RACGAP1-217ENST00000549342 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
RACGAP1-217ENST00000549342 CNKSR2Q8WXI2 1034 aa11.27□□□□□ -0.61
RACGAP1-217ENST00000549342 DAXXQ9UER7 740 aaPredicted RBP11.26□□□□□ -0.61
RACGAP1-217ENST00000549342 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
RACGAP1-217ENST00000549342 NPM3O75607 178 aaKnown RBP11.16□□□□□ -0.62
RACGAP1-217ENST00000549342 DMRT2Q9Y5R5 561 aa11.09□□□□□ -0.63
RACGAP1-217ENST00000549342 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
RACGAP1-217ENST00000549342 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
RACGAP1-217ENST00000549342 PRKCSHP14314 528 aaPredicted RBP10.91□□□□□ -0.66
RACGAP1-217ENST00000549342 DCAF8L2P0C7V8 631 aa10.9□□□□□ -0.66
RACGAP1-217ENST00000549342 DNAJC5BQ9UF47 199 aa10.9□□□□□ -0.66
RACGAP1-217ENST00000549342 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
RACGAP1-217ENST00000549342 NACADO15069 1562 aa10.87□□□□□ -0.67
RACGAP1-217ENST00000549342 ARXQ96QS3 562 aa10.87□□□□□ -0.67
RACGAP1-217ENST00000549342 BCANQ96GW7 911 aa10.83□□□□□ -0.68
RACGAP1-217ENST00000549342 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
RACGAP1-217ENST00000549342 PABPN1Q86U42 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
RACGAP1-217ENST00000549342 MYO15BQ96JP2 1530 aa10.7□□□□□ -0.7
RACGAP1-217ENST00000549342 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
RACGAP1-217ENST00000549342 ZBTB22O15209 634 aa10.67□□□□□ -0.7
RACGAP1-217ENST00000549342 PLCB2Q00722 1185 aa10.67□□□□□ -0.7
RACGAP1-217ENST00000549342 TIMELESSQ9UNS1 1208 aa10.64□□□□□ -0.71
RACGAP1-217ENST00000549342 TPRNQ4KMQ1 711 aa10.59□□□□□ -0.71
RACGAP1-217ENST00000549342 FOXD4L1Q9NU39 408 aa10.58□□□□□ -0.72
RACGAP1-217ENST00000549342 SHROOM4Q9ULL8 1493 aa10.55□□□□□ -0.72
RACGAP1-217ENST00000549342 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
RACGAP1-217ENST00000549342 HAP1P54257 671 aaPredicted RBP10.55□□□□□ -0.72
RACGAP1-217ENST00000549342 HOMEZQ8IX15 550 aa10.55□□□□□ -0.72
RACGAP1-217ENST00000549342 BICRAQ9NZM4 1560 aa10.54□□□□□ -0.72
RACGAP1-217ENST00000549342 ERICH6Q7L0X2 663 aa10.52□□□□□ -0.73
RACGAP1-217ENST00000549342 CACNB1Q02641 598 aaPredicted RBP10.51□□□□□ -0.73
RACGAP1-217ENST00000549342 DCAF1Q9Y4B6 1507 aa10.51□□□□□ -0.73
RACGAP1-217ENST00000549342 ZCCHC6Q5VYS8 1495 aaKnown RBP10.49□□□□□ -0.73
RACGAP1-217ENST00000549342 UNC13AQ9UPW8 1703 aa10.48□□□□□ -0.73
RACGAP1-217ENST00000549342 RANGAP1P46060 587 aaPredicted RBP10.47□□□□□ -0.73
RACGAP1-217ENST00000549342 SLC4A2P04920 1241 aa10.46□□□□□ -0.73
RACGAP1-217ENST00000549342 FKBP8Q14318 412 aa10.46□□□□□ -0.73
RACGAP1-217ENST00000549342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.46□□□□□ -0.734e-10■■■□□ 18
RACGAP1-217ENST00000549342 CECR2Q9BXF3 1484 aa10.46□□□□□ -0.74
RACGAP1-217ENST00000549342 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
RACGAP1-217ENST00000549342 GTF3C3Q9Y5Q9 886 aa10.39□□□□□ -0.75
RACGAP1-217ENST00000549342 SCRIBQ14160 1630 aa10.38□□□□□ -0.75
RACGAP1-217ENST00000549342 CC2D2AQ9P2K1 1620 aa10.38□□□□□ -0.75
RACGAP1-217ENST00000549342 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
RACGAP1-217ENST00000549342 EIF4G1Q04637 1599 aaKnown RBP10.36□□□□□ -0.75
RACGAP1-217ENST00000549342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.25□□□□□ -0.77
RACGAP1-217ENST00000549342 HNRNPUL2Q1KMD3 747 aaKnown RBP10.25□□□□□ -0.77
RACGAP1-217ENST00000549342 U3KPZ7 1027 aaPredicted RBP10.24□□□□□ -0.77
RACGAP1-217ENST00000549342 TTBK1Q5TCY1 1321 aaPredicted RBP10.22□□□□□ -0.77
RACGAP1-217ENST00000549342 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.77
RACGAP1-217ENST00000549342 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
RACGAP1-217ENST00000549342 DNAJC5Q9H3Z4 198 aa10.19□□□□□ -0.78
RACGAP1-217ENST00000549342 ATXN8OSP0DMR3 200 aa10.18□□□□□ -0.78
RACGAP1-217ENST00000549342 APLP2Q06481 763 aa10.17□□□□□ -0.78
RACGAP1-217ENST00000549342 TMEM132AQ24JP5 1023 aa10.15□□□□□ -0.78
RACGAP1-217ENST00000549342 PODXL2Q9NZ53 605 aa10.15□□□□□ -0.78
RACGAP1-217ENST00000549342 MYT1Q01538 1121 aa10.11□□□□□ -0.79
RACGAP1-217ENST00000549342 RNF39Q9H2S5 420 aa10.11□□□□□ -0.79
RACGAP1-217ENST00000549342 C14orf37Q86TY3 774 aa10.1□□□□□ -0.79
RACGAP1-217ENST00000549342 KDM2AQ9Y2K7 1162 aa10.09□□□□□ -0.79
RACGAP1-217ENST00000549342 ERCC6Q03468 1493 aa10.07□□□□□ -0.8
RACGAP1-217ENST00000549342 CUX2O14529 1486 aa10.06□□□□□ -0.8
RACGAP1-217ENST00000549342 NCAPD3P42695 1498 aa10.06□□□□□ -0.8
RACGAP1-217ENST00000549342 C1QBPQ07021 282 aaKnown RBP10.03□□□□□ -0.8
RACGAP1-217ENST00000549342 ATAD2BQ9ULI0 1458 aa9.98□□□□□ -0.81
RACGAP1-217ENST00000549342 FBLN2P98095 1184 aa9.98□□□□□ -0.81
RACGAP1-217ENST00000549342 SMARCA2P51531 1590 aa9.97□□□□□ -0.81
RACGAP1-217ENST00000549342 ATF5Q9Y2D1 282 aaPredicted RBP9.97□□□□□ -0.81
RACGAP1-217ENST00000549342 ZNF219Q9P2Y4 722 aaPredicted RBP9.95□□□□□ -0.82
RACGAP1-217ENST00000549342 HMGXB3Q12766 1538 aa9.94□□□□□ -0.82
RACGAP1-217ENST00000549342 CAPN15O75808 1086 aa9.94□□□□□ -0.82
RACGAP1-217ENST00000549342 NPM2Q86SE8 214 aaKnown RBP9.94□□□□□ -0.82
RACGAP1-217ENST00000549342 KLHL34Q8N239 644 aa9.93□□□□□ -0.82
RACGAP1-217ENST00000549342 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.93□□□□□ -0.82
RACGAP1-217ENST00000549342 FBXO3Q9UK99 471 aa9.93□□□□□ -0.82
RACGAP1-217ENST00000549342 BAZ1BQ9UIG0 1483 aaKnown RBP9.91□□□□□ -0.82
RACGAP1-217ENST00000549342 BAZ1AQ9NRL2 1556 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms