RNA–Protein interactions for RNA: ENST00000548783.1

CSRP2-205, Transcript of cysteine and glycine rich protein 2, humanhuman

TSL 1 (best)

Gene CSRP2, Length 5,078 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP2-205ENST00000548783 NISCHQ9Y2I1 1504 aa10.8□□□□□ -0.68
CSRP2-205ENST00000548783 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
CSRP2-205ENST00000548783 SUPT5HO00267 1087 aaKnown RBP10.67□□□□□ -0.7
CSRP2-205ENST00000548783 SHROOM4Q9ULL8 1493 aa10.47□□□□□ -0.73
CSRP2-205ENST00000548783 PCGF6Q9BYE7 350 aa10.28□□□□□ -0.76
CSRP2-205ENST00000548783 PELP1Q8IZL8 1130 aaKnown RBP10.24□□□□□ -0.77
CSRP2-205ENST00000548783 EHMT2Q96KQ7 1210 aa10.21□□□□□ -0.77
CSRP2-205ENST00000548783 ZEB1P37275 1124 aaPredicted RBP10.09□□□□□ -0.79
CSRP2-205ENST00000548783 CENPBP07199 599 aaPredicted RBP10.06□□□□□ -0.8
CSRP2-205ENST00000548783 FAM9AQ8IZU1 332 aaPredicted RBP10.02□□□□□ -0.81
CSRP2-205ENST00000548783 MYT1Q01538 1121 aa10□□□□□ -0.81
CSRP2-205ENST00000548783 HRCP23327 699 aa9.99□□□□□ -0.81
CSRP2-205ENST00000548783 APLP2Q06481 763 aa9.96□□□□□ -0.82
CSRP2-205ENST00000548783 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
CSRP2-205ENST00000548783 TTBK1Q5TCY1 1321 aaPredicted RBP9.93□□□□□ -0.82
CSRP2-205ENST00000548783 TRIM41Q8WV44 630 aa9.87□□□□□ -0.83
CSRP2-205ENST00000548783 TRIM26Q12899 539 aaPredicted RBP9.85□□□□□ -0.83
CSRP2-205ENST00000548783 ERICH6Q7L0X2 663 aa9.81□□□□□ -0.84
CSRP2-205ENST00000548783 YTHDC1Q96MU7 727 aaKnown RBP9.8□□□□□ -0.84
CSRP2-205ENST00000548783 PPARGC1BQ86YN6 1023 aaKnown RBP9.77□□□□□ -0.85
CSRP2-205ENST00000548783 CHIC1Q5VXU3 224 aa9.73□□□□□ -0.85
CSRP2-205ENST00000548783 LOC105371045A0A1W2PR82 267 aa9.68□□□□□ -0.86
CSRP2-205ENST00000548783 NEFLP07196 543 aa9.68□□□□□ -0.86
CSRP2-205ENST00000548783 RANGAP1P46060 587 aaPredicted RBP9.66□□□□□ -0.86
CSRP2-205ENST00000548783 UBTFP17480 764 aaKnown RBP9.66□□□□□ -0.86
CSRP2-205ENST00000548783 DIEXFQ68CQ4 756 aaKnown RBP9.54□□□□□ -0.88
CSRP2-205ENST00000548783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.51□□□□□ -0.89
CSRP2-205ENST00000548783 ATP1B4Q9UN42 357 aaPredicted RBP9.49□□□□□ -0.89
CSRP2-205ENST00000548783 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
CSRP2-205ENST00000548783 HNRNPUL2Q1KMD3 747 aaKnown RBP9.44□□□□□ -0.9
CSRP2-205ENST00000548783 ACIN1Q9UKV3 1341 aaKnown RBP9.39□□□□□ -0.91
CSRP2-205ENST00000548783 ITGAEP38570 1179 aa9.37□□□□□ -0.91
CSRP2-205ENST00000548783 ZNF316A6NFI3 1004 aaPredicted RBP9.3□□□□□ -0.92
CSRP2-205ENST00000548783 DAXXQ9UER7 740 aaPredicted RBP9.3□□□□□ -0.92
CSRP2-205ENST00000548783 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.93
CSRP2-205ENST00000548783 BCANQ96GW7 911 aa9.27□□□□□ -0.93
CSRP2-205ENST00000548783 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
CSRP2-205ENST00000548783 POLR3GLQ9BT43 218 aa9.23□□□□□ -0.93
CSRP2-205ENST00000548783 SCAF1Q9H7N4 1312 aaKnown RBP9.23□□□□□ -0.93
CSRP2-205ENST00000548783 NEUROD1Q13562 356 aa9.19□□□□□ -0.94
CSRP2-205ENST00000548783 CNGB1Q14028 1251 aaPredicted RBP9.18□□□□□ -0.94
CSRP2-205ENST00000548783 CDK11AQ9UQ88 783 aaPredicted RBP9.17□□□□□ -0.94
CSRP2-205ENST00000548783 ANP32CO43423 234 aa9.15□□□□□ -0.94
CSRP2-205ENST00000548783 CLSPNQ9HAW4 1339 aa9.15□□□□□ -0.95
CSRP2-205ENST00000548783 FAM50AQ14320 339 aaKnown RBP9.13□□□□□ -0.95
CSRP2-205ENST00000548783 MYO15BQ96JP2 1530 aa9.09□□□□□ -0.95
CSRP2-205ENST00000548783 SLC24A1O60721 1099 aa9.05□□□□□ -0.96
CSRP2-205ENST00000548783 FKBP8Q14318 412 aa9.05□□□□□ -0.96
CSRP2-205ENST00000548783 CSRNP3Q8WYN3 585 aa9.04□□□□□ -0.96
CSRP2-205ENST00000548783 TRIM52Q96A61 297 aa9.03□□□□□ -0.96
CSRP2-205ENST00000548783 ZCCHC6Q5VYS8 1495 aaKnown RBP9.01□□□□□ -0.97
CSRP2-205ENST00000548783 ANP32AP39687 249 aaKnown RBP9□□□□□ -0.97
CSRP2-205ENST00000548783 MIER1Q8N108 512 aa9□□□□□ -0.97
CSRP2-205ENST00000548783 CCDC180Q9P1Z9 1646 aa9□□□□□ -0.97
CSRP2-205ENST00000548783 MYT1LQ9UL68 1186 aa8.96□□□□□ -0.97
CSRP2-205ENST00000548783 DDX10Q13206 875 aaKnown RBP8.93□□□□□ -0.98
CSRP2-205ENST00000548783 ZNF326Q5BKZ1 582 aaKnown RBP8.93□□□□□ -0.98
CSRP2-205ENST00000548783 HNRNPUQ00839 825 aaKnown RBP eCLIP8.92□□□□□ -0.98
CSRP2-205ENST00000548783 NPM2Q86SE8 214 aaKnown RBP8.92□□□□□ -0.98
CSRP2-205ENST00000548783 ANP32EQ9BTT0 268 aa8.9□□□□□ -0.98
CSRP2-205ENST00000548783 SLC4A1APQ9BWU0 796 aaKnown RBP8.9□□□□□ -0.98
CSRP2-205ENST00000548783 ABCC9O60706 1549 aa8.9□□□□□ -0.98
CSRP2-205ENST00000548783 PABPN1Q86U42 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
CSRP2-205ENST00000548783 TONSLQ96HA7 1378 aa8.88□□□□□ -0.99
CSRP2-205ENST00000548783 EIF5BO60841 1220 aaKnown RBP8.88□□□□□ -0.99
CSRP2-205ENST00000548783 NBR1Q14596 966 aa8.87□□□□□ -0.99
CSRP2-205ENST00000548783 SCRIBQ14160 1630 aa8.85□□□□□ -0.99
CSRP2-205ENST00000548783 P3H3Q8IVL6 736 aa8.85□□□□□ -0.99
CSRP2-205ENST00000548783 FAM9BQ8IZU0 186 aa8.85□□□□□ -0.99
CSRP2-205ENST00000548783 ZBTB47Q9UFB7 747 aaPredicted RBP8.84□□□□□ -0.99
CSRP2-205ENST00000548783 CANXP27824 592 aaKnown RBP8.83□□□□□ -1
CSRP2-205ENST00000548783 CCDC136Q96JN2 1154 aa8.82□□□□□ -1
CSRP2-205ENST00000548783 IRX6P78412 446 aaPredicted RBP8.81□□□□□ -1
CSRP2-205ENST00000548783 CEP162Q5TB80 1403 aa8.8□□□□□ -1
CSRP2-205ENST00000548783 SUPT16HQ9Y5B9 1047 aaKnown RBP8.8□□□□□ -1
CSRP2-205ENST00000548783 CLIP1P30622 1438 aa8.79□□□□□ -1
CSRP2-205ENST00000548783 MRS2Q9HD23 443 aa8.77□□□□□ -1.01
CSRP2-205ENST00000548783 HIRIP3Q9BW71 556 aaPredicted RBP8.76□□□□□ -1.01
CSRP2-205ENST00000548783 GLIPR1L2Q4G1C9 344 aa8.76□□□□□ -1.01
CSRP2-205ENST00000548783 RSF1Q96T23 1441 aaPredicted RBP8.75□□□□□ -1.01
CSRP2-205ENST00000548783 GOLGA3Q08378 1498 aa8.74□□□□□ -1.01
CSRP2-205ENST00000548783 EEA1Q15075 1411 aa8.74□□□□□ -1.01
CSRP2-205ENST00000548783 ARID3CA6NKF2 412 aa8.73□□□□□ -1.01
CSRP2-205ENST00000548783 TMC1Q8TDI8 760 aa8.73□□□□□ -1.01
CSRP2-205ENST00000548783 BCL11AQ9H165 835 aa8.73□□□□□ -1.01
CSRP2-205ENST00000548783 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
CSRP2-205ENST00000548783 UPF2Q9HAU5 1272 aaKnown RBP8.72□□□□□ -1.01
CSRP2-205ENST00000548783 TNIKQ9UKE5 1360 aa8.72□□□□□ -1.01
CSRP2-205ENST00000548783 ANP32BQ92688 251 aaKnown RBP8.71□□□□□ -1.01
CSRP2-205ENST00000548783 ZNF777Q9ULD5 760 aaPredicted RBP8.69□□□□□ -1.02
CSRP2-205ENST00000548783 EIF4G2P78344 907 aaKnown RBP eCLIP8.68□□□□□ -1.02
CSRP2-205ENST00000548783 CHIC2Q9UKJ5 165 aa8.68□□□□□ -1.02
CSRP2-205ENST00000548783 HSP90AA1P07900 732 aaKnown RBP8.67□□□□□ -1.02
CSRP2-205ENST00000548783 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.67□□□□□ -1.02
CSRP2-205ENST00000548783 DDRGK1Q96HY6 314 aa8.66□□□□□ -1.02
CSRP2-205ENST00000548783 PPP4R2Q9NY27 417 aa8.66□□□□□ -1.02
CSRP2-205ENST00000548783 ARXQ96QS3 562 aa8.65□□□□□ -1.02
CSRP2-205ENST00000548783 NEFMP07197 916 aa8.65□□□□□ -1.02
CSRP2-205ENST00000548783 NOP58Q9Y2X3 529 aaKnown RBP8.65□□□□□ -1.02
CSRP2-205ENST00000548783 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms