RNA–Protein interactions for RNA: ENST00000546749.5

TMEM106C-204, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-204ENST00000546749 AEBP2Q6ZN18 517 aaPredicted RBP22.24■■□□□ 1.15
TMEM106C-204ENST00000546749 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
TMEM106C-204ENST00000546749 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
TMEM106C-204ENST00000546749 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
TMEM106C-204ENST00000546749 FOXD1Q16676 465 aa17.67■□□□□ 0.42
TMEM106C-204ENST00000546749 PLPPR3Q6T4P5 718 aa17.4■□□□□ 0.38
TMEM106C-204ENST00000546749 ADRA2BP18089 450 aa16.7■□□□□ 0.26
TMEM106C-204ENST00000546749 PIAS4Q8N2W9 510 aaPredicted RBP16.69■□□□□ 0.26
TMEM106C-204ENST00000546749 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
TMEM106C-204ENST00000546749 MSH5O43196 834 aa16.59■□□□□ 0.25
TMEM106C-204ENST00000546749 POTEDQ86YR6 584 aa15.6■□□□□ 0.09
TMEM106C-204ENST00000546749 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
TMEM106C-204ENST00000546749 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
TMEM106C-204ENST00000546749 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
TMEM106C-204ENST00000546749 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
TMEM106C-204ENST00000546749 CNKSR2Q8WXI2 1034 aa14.93□□□□□ -0.02
TMEM106C-204ENST00000546749 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
TMEM106C-204ENST00000546749 NISCHQ9Y2I1 1504 aa14.7□□□□□ -0.06
TMEM106C-204ENST00000546749 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
TMEM106C-204ENST00000546749 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
TMEM106C-204ENST00000546749 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
TMEM106C-204ENST00000546749 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
TMEM106C-204ENST00000546749 KCNA4P22459 653 aa14.41□□□□□ -0.1
TMEM106C-204ENST00000546749 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
TMEM106C-204ENST00000546749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.13□□□□□ -0.15
TMEM106C-204ENST00000546749 CACNB1Q02641 598 aaPredicted RBP14.08□□□□□ -0.16
TMEM106C-204ENST00000546749 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
TMEM106C-204ENST00000546749 C1QBPQ07021 282 aaKnown RBP13.97□□□□□ -0.17
TMEM106C-204ENST00000546749 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
TMEM106C-204ENST00000546749 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
TMEM106C-204ENST00000546749 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
TMEM106C-204ENST00000546749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.63□□□□□ -0.23
TMEM106C-204ENST00000546749 APLP2Q06481 763 aa13.63□□□□□ -0.23
TMEM106C-204ENST00000546749 HNRNPUL2Q1KMD3 747 aaKnown RBP13.63□□□□□ -0.23
TMEM106C-204ENST00000546749 CAPN15O75808 1086 aa13.54□□□□□ -0.24
TMEM106C-204ENST00000546749 SAMD1Q6SPF0 538 aaPredicted RBP13.51□□□□□ -0.25
TMEM106C-204ENST00000546749 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
TMEM106C-204ENST00000546749 FOXD4L1Q9NU39 408 aa13.46□□□□□ -0.25
TMEM106C-204ENST00000546749 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
TMEM106C-204ENST00000546749 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
TMEM106C-204ENST00000546749 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
TMEM106C-204ENST00000546749 DSG3P32926 999 aa13.27□□□□□ -0.29
TMEM106C-204ENST00000546749 ABCB7O75027 752 aa13.17□□□□□ -0.3
TMEM106C-204ENST00000546749 ZBTB22O15209 634 aa13.16□□□□□ -0.3
TMEM106C-204ENST00000546749 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
TMEM106C-204ENST00000546749 POLA2Q14181 598 aa13.03□□□□□ -0.32
TMEM106C-204ENST00000546749 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
TMEM106C-204ENST00000546749 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
TMEM106C-204ENST00000546749 ZBTB12Q9Y330 459 aaPredicted RBP12.91□□□□□ -0.34
TMEM106C-204ENST00000546749 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
TMEM106C-204ENST00000546749 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
TMEM106C-204ENST00000546749 FBLN2P98095 1184 aa12.71□□□□□ -0.37
TMEM106C-204ENST00000546749 CCDC180Q9P1Z9 1646 aa12.61□□□□□ -0.39
TMEM106C-204ENST00000546749 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
TMEM106C-204ENST00000546749 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
TMEM106C-204ENST00000546749 SPDYE2BA6NHP3 402 aa12.46□□□□□ -0.41
TMEM106C-204ENST00000546749 SPDYE6P0CI01 402 aa12.46□□□□□ -0.41
TMEM106C-204ENST00000546749 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
TMEM106C-204ENST00000546749 ZCCHC6Q5VYS8 1495 aaKnown RBP12.4□□□□□ -0.43
TMEM106C-204ENST00000546749 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
TMEM106C-204ENST00000546749 ZNF692Q9BU19 519 aaPredicted RBP12.37□□□□□ -0.43
TMEM106C-204ENST00000546749 POTEHQ6S545 545 aa12.34□□□□□ -0.43
TMEM106C-204ENST00000546749 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
TMEM106C-204ENST00000546749 CHRDL2Q6WN34 429 aa12.33□□□□□ -0.44
TMEM106C-204ENST00000546749 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
TMEM106C-204ENST00000546749 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
TMEM106C-204ENST00000546749 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
TMEM106C-204ENST00000546749 SHROOM4Q9ULL8 1493 aa12.21□□□□□ -0.46
TMEM106C-204ENST00000546749 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
TMEM106C-204ENST00000546749 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
TMEM106C-204ENST00000546749 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM106C-204ENST00000546749 DCAF8L2P0C7V8 631 aa12.12□□□□□ -0.47
TMEM106C-204ENST00000546749 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
TMEM106C-204ENST00000546749 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
TMEM106C-204ENST00000546749 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
TMEM106C-204ENST00000546749 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
TMEM106C-204ENST00000546749 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.49
TMEM106C-204ENST00000546749 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
TMEM106C-204ENST00000546749 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.5
TMEM106C-204ENST00000546749 PRKAR2AP13861 404 aaKnown RBP11.94□□□□□ -0.5
TMEM106C-204ENST00000546749 HAX1O00165 279 aa11.88□□□□□ -0.51
TMEM106C-204ENST00000546749 CHADLQ6NUI6 762 aa11.8□□□□□ -0.52
TMEM106C-204ENST00000546749 FKBP8Q14318 412 aa11.76□□□□□ -0.53
TMEM106C-204ENST00000546749 NACADO15069 1562 aa11.75□□□□□ -0.53
TMEM106C-204ENST00000546749 PROM2Q8N271 834 aa11.7□□□□□ -0.54
TMEM106C-204ENST00000546749 SP7Q8TDD2 431 aaPredicted RBP11.7□□□□□ -0.54
TMEM106C-204ENST00000546749 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
TMEM106C-204ENST00000546749 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
TMEM106C-204ENST00000546749 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
TMEM106C-204ENST00000546749 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
TMEM106C-204ENST00000546749 NPM1P06748 294 aaKnown RBP eCLIP11.63□□□□□ -0.55
TMEM106C-204ENST00000546749 ABCC9O60706 1549 aa11.62□□□□□ -0.55
TMEM106C-204ENST00000546749 SCRIBQ14160 1630 aa11.6□□□□□ -0.55
TMEM106C-204ENST00000546749 CD44P16070 742 aaKnown RBP11.59□□□□□ -0.55
TMEM106C-204ENST00000546749 MIER1Q8N108 512 aa11.58□□□□□ -0.56
TMEM106C-204ENST00000546749 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
TMEM106C-204ENST00000546749 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
TMEM106C-204ENST00000546749 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
TMEM106C-204ENST00000546749 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
TMEM106C-204ENST00000546749 RB1CC1Q8TDY2 1594 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms