RNA–Protein interactions for RNA: ENST00000543629.5

LMNTD1-210, Transcript of lamin tail domain containing 1, humanhuman

TSL 2

Gene LMNTD1, Length 636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-210ENST00000543629 AEBP2Q6ZN18 517 aaPredicted RBP26.46■■□□□ 1.83
LMNTD1-210ENST00000543629 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
LMNTD1-210ENST00000543629 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
LMNTD1-210ENST00000543629 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
LMNTD1-210ENST00000543629 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
LMNTD1-210ENST00000543629 FOXD1Q16676 465 aa20.72■□□□□ 0.91
LMNTD1-210ENST00000543629 ADRA2BP18089 450 aa20.35■□□□□ 0.85
LMNTD1-210ENST00000543629 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
LMNTD1-210ENST00000543629 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
LMNTD1-210ENST00000543629 KCNA4P22459 653 aa19.25■□□□□ 0.67
LMNTD1-210ENST00000543629 PPP4R3CPQ6ZMV5 832 aa19.13■□□□□ 0.65
LMNTD1-210ENST00000543629 MSH5O43196 834 aa18.96■□□□□ 0.63
LMNTD1-210ENST00000543629 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
LMNTD1-210ENST00000543629 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
LMNTD1-210ENST00000543629 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
LMNTD1-210ENST00000543629 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
LMNTD1-210ENST00000543629 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
LMNTD1-210ENST00000543629 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
LMNTD1-210ENST00000543629 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
LMNTD1-210ENST00000543629 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
LMNTD1-210ENST00000543629 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
LMNTD1-210ENST00000543629 DMRT2Q9Y5R5 561 aa17.96■□□□□ 0.47
LMNTD1-210ENST00000543629 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
LMNTD1-210ENST00000543629 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
LMNTD1-210ENST00000543629 ZBTB22O15209 634 aa17.7■□□□□ 0.42
LMNTD1-210ENST00000543629 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
LMNTD1-210ENST00000543629 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
LMNTD1-210ENST00000543629 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
LMNTD1-210ENST00000543629 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
LMNTD1-210ENST00000543629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
LMNTD1-210ENST00000543629 ATXN8OSP0DMR3 200 aa16.92■□□□□ 0.3
LMNTD1-210ENST00000543629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
LMNTD1-210ENST00000543629 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
LMNTD1-210ENST00000543629 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
LMNTD1-210ENST00000543629 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
LMNTD1-210ENST00000543629 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
LMNTD1-210ENST00000543629 APLP2Q06481 763 aa16.48■□□□□ 0.23
LMNTD1-210ENST00000543629 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
LMNTD1-210ENST00000543629 FKBP8Q14318 412 aa16.31■□□□□ 0.2
LMNTD1-210ENST00000543629 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
LMNTD1-210ENST00000543629 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
LMNTD1-210ENST00000543629 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
LMNTD1-210ENST00000543629 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
LMNTD1-210ENST00000543629 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
LMNTD1-210ENST00000543629 CAPN15O75808 1086 aa16.09■□□□□ 0.17
LMNTD1-210ENST00000543629 POLA2Q14181 598 aa15.95■□□□□ 0.14
LMNTD1-210ENST00000543629 FBLN2P98095 1184 aa15.92■□□□□ 0.14
LMNTD1-210ENST00000543629 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
LMNTD1-210ENST00000543629 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
LMNTD1-210ENST00000543629 ABCB7O75027 752 aa15.81■□□□□ 0.12
LMNTD1-210ENST00000543629 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
LMNTD1-210ENST00000543629 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
LMNTD1-210ENST00000543629 RTN4Q9NQC3 1192 aaKnown RBP15.69■□□□□ 0.1
LMNTD1-210ENST00000543629 DSG3P32926 999 aa15.65■□□□□ 0.1
LMNTD1-210ENST00000543629 FBXO3Q9UK99 471 aa15.61■□□□□ 0.09
LMNTD1-210ENST00000543629 PROM2Q8N271 834 aa15.56■□□□□ 0.08
LMNTD1-210ENST00000543629 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
LMNTD1-210ENST00000543629 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
LMNTD1-210ENST00000543629 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
LMNTD1-210ENST00000543629 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
LMNTD1-210ENST00000543629 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
LMNTD1-210ENST00000543629 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
LMNTD1-210ENST00000543629 VASPP50552 380 aaPredicted RBP15.36■□□□□ 0.05
LMNTD1-210ENST00000543629 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
LMNTD1-210ENST00000543629 SSUH2Q9Y2M2 353 aa15.27■□□□□ 0.04
LMNTD1-210ENST00000543629 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
LMNTD1-210ENST00000543629 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
LMNTD1-210ENST00000543629 STAG3Q9UJ98 1225 aa15.12■□□□□ 0.01
LMNTD1-210ENST00000543629 SLC24A1O60721 1099 aa15.03■□□□□ -0
LMNTD1-210ENST00000543629 KLHL34Q8N239 644 aa15.01□□□□□ -0.01
LMNTD1-210ENST00000543629 PLCD3Q8N3E9 789 aa15.01□□□□□ -0.01
LMNTD1-210ENST00000543629 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
LMNTD1-210ENST00000543629 MIER1Q8N108 512 aa14.94□□□□□ -0.02
LMNTD1-210ENST00000543629 SPOCK2Q92563 424 aa14.93□□□□□ -0.02
LMNTD1-210ENST00000543629 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
LMNTD1-210ENST00000543629 ABCC9O60706 1549 aa14.87□□□□□ -0.03
LMNTD1-210ENST00000543629 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
LMNTD1-210ENST00000543629 PKD2Q13563 968 aa14.83□□□□□ -0.04
LMNTD1-210ENST00000543629 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
LMNTD1-210ENST00000543629 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
LMNTD1-210ENST00000543629 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
LMNTD1-210ENST00000543629 CLEC11AQ9Y240 323 aa14.72□□□□□ -0.05
LMNTD1-210ENST00000543629 ECM2O94769 699 aaPredicted RBP14.7□□□□□ -0.06
LMNTD1-210ENST00000543629 REM2Q8IYK8 340 aaPredicted RBP14.69□□□□□ -0.06
LMNTD1-210ENST00000543629 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
LMNTD1-210ENST00000543629 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
LMNTD1-210ENST00000543629 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
LMNTD1-210ENST00000543629 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
LMNTD1-210ENST00000543629 PITPNM1O00562 1244 aa14.52□□□□□ -0.09
LMNTD1-210ENST00000543629 RGL2O15211 777 aa14.51□□□□□ -0.09
LMNTD1-210ENST00000543629 TRIM41Q8WV44 630 aa14.5□□□□□ -0.09
LMNTD1-210ENST00000543629 GSE1Q14687 1217 aa14.49□□□□□ -0.09
LMNTD1-210ENST00000543629 NUBP1P53384 320 aa14.46□□□□□ -0.09
LMNTD1-210ENST00000543629 MNX1P50219 401 aaPredicted RBP14.42□□□□□ -0.1
LMNTD1-210ENST00000543629 DCAF8Q5TAQ9 597 aa14.42□□□□□ -0.1
LMNTD1-210ENST00000543629 FAM212AQ96EL1 285 aa14.41□□□□□ -0.1
LMNTD1-210ENST00000543629 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.4□□□□□ -0.1
LMNTD1-210ENST00000543629 BBXQ8WY36 941 aaPredicted RBP14.39□□□□□ -0.11
LMNTD1-210ENST00000543629 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
LMNTD1-210ENST00000543629 NPM1P06748 294 aaKnown RBP eCLIP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms