RNA–Protein interactions for RNA: ENST00000541974.5

PACRG-205, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-205ENST00000541974 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
PACRG-205ENST00000541974 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
PACRG-205ENST00000541974 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
PACRG-205ENST00000541974 PHF23Q9BUL5 403 aaPredicted RBP19.94■□□□□ 0.78
PACRG-205ENST00000541974 FOXD1Q16676 465 aa18.97■□□□□ 0.63
PACRG-205ENST00000541974 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
PACRG-205ENST00000541974 MSH5O43196 834 aa17.77■□□□□ 0.44
PACRG-205ENST00000541974 PIAS4Q8N2W9 510 aaPredicted RBP17.56■□□□□ 0.4
PACRG-205ENST00000541974 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
PACRG-205ENST00000541974 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
PACRG-205ENST00000541974 ADRA2BP18089 450 aa17.39■□□□□ 0.37
PACRG-205ENST00000541974 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
PACRG-205ENST00000541974 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
PACRG-205ENST00000541974 SCAF1Q9H7N4 1312 aaKnown RBP15.75■□□□□ 0.11
PACRG-205ENST00000541974 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
PACRG-205ENST00000541974 CACNB1Q02641 598 aaPredicted RBP15.43■□□□□ 0.06
PACRG-205ENST00000541974 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
PACRG-205ENST00000541974 HOXD11P31277 338 aaPredicted RBP15.33■□□□□ 0.04
PACRG-205ENST00000541974 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
PACRG-205ENST00000541974 RNF39Q9H2S5 420 aa15.22■□□□□ 0.03
PACRG-205ENST00000541974 CNKSR2Q8WXI2 1034 aa15.11■□□□□ 0.01
PACRG-205ENST00000541974 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
PACRG-205ENST00000541974 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
PACRG-205ENST00000541974 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
PACRG-205ENST00000541974 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
PACRG-205ENST00000541974 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
PACRG-205ENST00000541974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
PACRG-205ENST00000541974 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.13
PACRG-205ENST00000541974 SPINK5Q9NQ38 1064 aaPredicted RBP14.15□□□□□ -0.14
PACRG-205ENST00000541974 KCNA4P22459 653 aa14.14□□□□□ -0.15
PACRG-205ENST00000541974 DSG3P32926 999 aa14.13□□□□□ -0.15
PACRG-205ENST00000541974 CAPN15O75808 1086 aa14.02□□□□□ -0.17
PACRG-205ENST00000541974 POTEHQ6S545 545 aa14.01□□□□□ -0.17
PACRG-205ENST00000541974 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
PACRG-205ENST00000541974 ABCB7O75027 752 aa13.73□□□□□ -0.21
PACRG-205ENST00000541974 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
PACRG-205ENST00000541974 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
PACRG-205ENST00000541974 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
PACRG-205ENST00000541974 APLP2Q06481 763 aa13.62□□□□□ -0.23
PACRG-205ENST00000541974 CCDC180Q9P1Z9 1646 aa13.6□□□□□ -0.23
PACRG-205ENST00000541974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
PACRG-205ENST00000541974 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
PACRG-205ENST00000541974 SLC4A1APQ9BWU0 796 aaKnown RBP13.57□□□□□ -0.24
PACRG-205ENST00000541974 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
PACRG-205ENST00000541974 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
PACRG-205ENST00000541974 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
PACRG-205ENST00000541974 POLA2Q14181 598 aa13.32□□□□□ -0.28
PACRG-205ENST00000541974 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
PACRG-205ENST00000541974 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
PACRG-205ENST00000541974 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
PACRG-205ENST00000541974 ZCCHC6Q5VYS8 1495 aaKnown RBP13.12□□□□□ -0.31
PACRG-205ENST00000541974 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
PACRG-205ENST00000541974 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
PACRG-205ENST00000541974 ZBTB22O15209 634 aa13.01□□□□□ -0.33
PACRG-205ENST00000541974 DCAF1Q9Y4B6 1507 aa12.98□□□□□ -0.33
PACRG-205ENST00000541974 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
PACRG-205ENST00000541974 REM2Q8IYK8 340 aaPredicted RBP12.96□□□□□ -0.33
PACRG-205ENST00000541974 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
PACRG-205ENST00000541974 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
PACRG-205ENST00000541974 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
PACRG-205ENST00000541974 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
PACRG-205ENST00000541974 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
PACRG-205ENST00000541974 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.36
PACRG-205ENST00000541974 MYO15BQ96JP2 1530 aa12.8□□□□□ -0.36
PACRG-205ENST00000541974 SHROOM4Q9ULL8 1493 aa12.75□□□□□ -0.37
PACRG-205ENST00000541974 ABCC9O60706 1549 aa12.73□□□□□ -0.37
PACRG-205ENST00000541974 HAX1O00165 279 aa12.69□□□□□ -0.38
PACRG-205ENST00000541974 NACADO15069 1562 aa12.69□□□□□ -0.38
PACRG-205ENST00000541974 EVX2Q03828 476 aa12.68□□□□□ -0.38
PACRG-205ENST00000541974 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
PACRG-205ENST00000541974 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
PACRG-205ENST00000541974 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
PACRG-205ENST00000541974 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
PACRG-205ENST00000541974 MKRN4PQ13434 485 aaPredicted RBP12.55□□□□□ -0.4
PACRG-205ENST00000541974 RB1CC1Q8TDY2 1594 aa12.54□□□□□ -0.4
PACRG-205ENST00000541974 FBLN2P98095 1184 aa12.48□□□□□ -0.41
PACRG-205ENST00000541974 PRKAR2AP13861 404 aaKnown RBP12.46□□□□□ -0.41
PACRG-205ENST00000541974 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.41
PACRG-205ENST00000541974 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
PACRG-205ENST00000541974 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
PACRG-205ENST00000541974 C19orf67A6NJJ6 358 aa12.41□□□□□ -0.42
PACRG-205ENST00000541974 SUPT5HO00267 1087 aaKnown RBP12.4□□□□□ -0.42
PACRG-205ENST00000541974 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
PACRG-205ENST00000541974 ZNF692Q9BU19 519 aaPredicted RBP12.35□□□□□ -0.43
PACRG-205ENST00000541974 GABBR2O75899 941 aa12.29□□□□□ -0.44
PACRG-205ENST00000541974 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
PACRG-205ENST00000541974 UNC13AQ9UPW8 1703 aa12.21□□□□□ -0.45
PACRG-205ENST00000541974 PABPN1Q86U42 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
PACRG-205ENST00000541974 RSF1Q96T23 1441 aaPredicted RBP12.16□□□□□ -0.46
PACRG-205ENST00000541974 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
PACRG-205ENST00000541974 LHX8Q68G74 356 aa12.14□□□□□ -0.47
PACRG-205ENST00000541974 POTEIP0CG38 1075 aa12.12□□□□□ -0.47
PACRG-205ENST00000541974 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
PACRG-205ENST00000541974 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.47
PACRG-205ENST00000541974 BICRAQ9NZM4 1560 aa12.08□□□□□ -0.48
PACRG-205ENST00000541974 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
PACRG-205ENST00000541974 MROH2BQ7Z745 1585 aa12.04□□□□□ -0.48
PACRG-205ENST00000541974 CD44P16070 742 aaKnown RBP12.03□□□□□ -0.48
PACRG-205ENST00000541974 FKBP8Q14318 412 aa12.03□□□□□ -0.48
PACRG-205ENST00000541974 SMARCA4P51532 1647 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms