RNA–Protein interactions for RNA: ENST00000540838.1

KDM5A-207, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-207ENST00000540838 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
KDM5A-207ENST00000540838 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
KDM5A-207ENST00000540838 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
KDM5A-207ENST00000540838 PHF23Q9BUL5 403 aaPredicted RBP19.76■□□□□ 0.75
KDM5A-207ENST00000540838 FOXD1Q16676 465 aa18.52■□□□□ 0.56
KDM5A-207ENST00000540838 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
KDM5A-207ENST00000540838 ADRA2BP18089 450 aa17.56■□□□□ 0.4
KDM5A-207ENST00000540838 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
KDM5A-207ENST00000540838 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
KDM5A-207ENST00000540838 MSH5O43196 834 aa17.19■□□□□ 0.34
KDM5A-207ENST00000540838 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
KDM5A-207ENST00000540838 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
KDM5A-207ENST00000540838 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
KDM5A-207ENST00000540838 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
KDM5A-207ENST00000540838 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
KDM5A-207ENST00000540838 CNKSR2Q8WXI2 1034 aa15.57■□□□□ 0.08
KDM5A-207ENST00000540838 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
KDM5A-207ENST00000540838 HOXD11P31277 338 aaPredicted RBP15.34■□□□□ 0.05
KDM5A-207ENST00000540838 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
KDM5A-207ENST00000540838 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
KDM5A-207ENST00000540838 KCNA4P22459 653 aa15.21■□□□□ 0.03
KDM5A-207ENST00000540838 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
KDM5A-207ENST00000540838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.71□□□□□ -0.058e-10■■■□□ 17.1
KDM5A-207ENST00000540838 RNF39Q9H2S5 420 aa14.68□□□□□ -0.06
KDM5A-207ENST00000540838 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
KDM5A-207ENST00000540838 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
KDM5A-207ENST00000540838 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
KDM5A-207ENST00000540838 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
KDM5A-207ENST00000540838 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
KDM5A-207ENST00000540838 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
KDM5A-207ENST00000540838 CAPN15O75808 1086 aa14.11□□□□□ -0.15
KDM5A-207ENST00000540838 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
KDM5A-207ENST00000540838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.08□□□□□ -0.16
KDM5A-207ENST00000540838 HNRNPUL2Q1KMD3 747 aaKnown RBP14.08□□□□□ -0.16
KDM5A-207ENST00000540838 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
KDM5A-207ENST00000540838 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
KDM5A-207ENST00000540838 APLP2Q06481 763 aa14.02□□□□□ -0.17
KDM5A-207ENST00000540838 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
KDM5A-207ENST00000540838 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
KDM5A-207ENST00000540838 ZBTB22O15209 634 aa13.96□□□□□ -0.17
KDM5A-207ENST00000540838 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
KDM5A-207ENST00000540838 DSG3P32926 999 aa13.88□□□□□ -0.19
KDM5A-207ENST00000540838 ZNF219Q9P2Y4 722 aaPredicted RBP13.88□□□□□ -0.19
KDM5A-207ENST00000540838 ABCB7O75027 752 aa13.81□□□□□ -0.2
KDM5A-207ENST00000540838 ATF5Q9Y2D1 282 aaPredicted RBP13.72□□□□□ -0.21
KDM5A-207ENST00000540838 NISCHQ9Y2I1 1504 aa13.69□□□□□ -0.22
KDM5A-207ENST00000540838 POLA2Q14181 598 aa13.63□□□□□ -0.23
KDM5A-207ENST00000540838 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
KDM5A-207ENST00000540838 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
KDM5A-207ENST00000540838 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
KDM5A-207ENST00000540838 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
KDM5A-207ENST00000540838 FBLN2P98095 1184 aa13.18□□□□□ -0.3
KDM5A-207ENST00000540838 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
KDM5A-207ENST00000540838 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
KDM5A-207ENST00000540838 AKT1S1Q96B36 256 aa13□□□□□ -0.33
KDM5A-207ENST00000540838 SPDYE2BA6NHP3 402 aa12.95□□□□□ -0.34
KDM5A-207ENST00000540838 SPDYE6P0CI01 402 aa12.95□□□□□ -0.34
KDM5A-207ENST00000540838 SPDYE2Q495Y8 402 aa12.95□□□□□ -0.34
KDM5A-207ENST00000540838 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
KDM5A-207ENST00000540838 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
KDM5A-207ENST00000540838 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
KDM5A-207ENST00000540838 POTEHQ6S545 545 aa12.81□□□□□ -0.36
KDM5A-207ENST00000540838 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
KDM5A-207ENST00000540838 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
KDM5A-207ENST00000540838 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
KDM5A-207ENST00000540838 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
KDM5A-207ENST00000540838 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
KDM5A-207ENST00000540838 SPDYE1Q8NFV5 336 aaPredicted RBP12.66□□□□□ -0.38
KDM5A-207ENST00000540838 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
KDM5A-207ENST00000540838 FXR2P51116 673 aaKnown RBP eCLIP12.55□□□□□ -0.43e-12■□□□□ 11.1
KDM5A-207ENST00000540838 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
KDM5A-207ENST00000540838 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
KDM5A-207ENST00000540838 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
KDM5A-207ENST00000540838 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
KDM5A-207ENST00000540838 FKBP8Q14318 412 aa12.39□□□□□ -0.43
KDM5A-207ENST00000540838 ABCC9O60706 1549 aa12.36□□□□□ -0.43
KDM5A-207ENST00000540838 HAX1O00165 279 aa12.34□□□□□ -0.43
KDM5A-207ENST00000540838 PROM2Q8N271 834 aa12.3□□□□□ -0.44
KDM5A-207ENST00000540838 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
KDM5A-207ENST00000540838 CCDC180Q9P1Z9 1646 aa12.27□□□□□ -0.44
KDM5A-207ENST00000540838 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
KDM5A-207ENST00000540838 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
KDM5A-207ENST00000540838 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
KDM5A-207ENST00000540838 SLC24A1O60721 1099 aa12.19□□□□□ -0.46
KDM5A-207ENST00000540838 EVX2Q03828 476 aa12.17□□□□□ -0.46
KDM5A-207ENST00000540838 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
KDM5A-207ENST00000540838 C19orf67A6NJJ6 358 aa12.14□□□□□ -0.47
KDM5A-207ENST00000540838 MIER1Q8N108 512 aa12.09□□□□□ -0.47
KDM5A-207ENST00000540838 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
KDM5A-207ENST00000540838 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
KDM5A-207ENST00000540838 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
KDM5A-207ENST00000540838 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
KDM5A-207ENST00000540838 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
KDM5A-207ENST00000540838 FBXO3Q9UK99 471 aa12□□□□□ -0.49
KDM5A-207ENST00000540838 ZRANB1Q9UGI0 708 aa11.97□□□□□ -0.49
KDM5A-207ENST00000540838 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
KDM5A-207ENST00000540838 GABBR2O75899 941 aa11.92□□□□□ -0.5
KDM5A-207ENST00000540838 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
KDM5A-207ENST00000540838 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
KDM5A-207ENST00000540838 ZNF579Q8NAF0 562 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms