RNA–Protein interactions for RNA: ENST00000539007.5

ERC1-209, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 3

Gene ERC1, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-209ENST00000539007 AEBP2Q6ZN18 517 aaPredicted RBP27.53■■■□□ 2
ERC1-209ENST00000539007 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
ERC1-209ENST00000539007 PHF23Q9BUL5 403 aaPredicted RBP23.38■■□□□ 1.33
ERC1-209ENST00000539007 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
ERC1-209ENST00000539007 FOXD1Q16676 465 aa21.73■■□□□ 1.07
ERC1-209ENST00000539007 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
ERC1-209ENST00000539007 PPP6R1Q9UPN7 881 aa20.75■□□□□ 0.91
ERC1-209ENST00000539007 ADRA2BP18089 450 aa20.71■□□□□ 0.91
ERC1-209ENST00000539007 PIAS4Q8N2W9 510 aaPredicted RBP20.41■□□□□ 0.86
ERC1-209ENST00000539007 MSH5O43196 834 aa20.04■□□□□ 0.8
ERC1-209ENST00000539007 MAPK8IP2Q13387 824 aaPredicted RBP18.9■□□□□ 0.62
ERC1-209ENST00000539007 PPP4R3CPQ6ZMV5 832 aa18.86■□□□□ 0.61
ERC1-209ENST00000539007 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
ERC1-209ENST00000539007 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
ERC1-209ENST00000539007 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
ERC1-209ENST00000539007 CNKSR2Q8WXI2 1034 aa18.34■□□□□ 0.53
ERC1-209ENST00000539007 NCBP3Q53F19 620 aaKnown RBP18.2■□□□□ 0.5
ERC1-209ENST00000539007 KCNA4P22459 653 aa18.17■□□□□ 0.5
ERC1-209ENST00000539007 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
ERC1-209ENST00000539007 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
ERC1-209ENST00000539007 NPM3O75607 178 aaKnown RBP18.04■□□□□ 0.48
ERC1-209ENST00000539007 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
ERC1-209ENST00000539007 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
ERC1-209ENST00000539007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.24■□□□□ 0.351e-6■■■□□ 16
ERC1-209ENST00000539007 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
ERC1-209ENST00000539007 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
ERC1-209ENST00000539007 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
ERC1-209ENST00000539007 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
ERC1-209ENST00000539007 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
ERC1-209ENST00000539007 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
ERC1-209ENST00000539007 ZBTB22O15209 634 aa16.74■□□□□ 0.27
ERC1-209ENST00000539007 FOXD4L1Q9NU39 408 aa16.72■□□□□ 0.27
ERC1-209ENST00000539007 SPINK5Q9NQ38 1064 aaPredicted RBP16.62■□□□□ 0.25
ERC1-209ENST00000539007 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
ERC1-209ENST00000539007 CAPN15O75808 1086 aa16.52■□□□□ 0.24
ERC1-209ENST00000539007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
ERC1-209ENST00000539007 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
ERC1-209ENST00000539007 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
ERC1-209ENST00000539007 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
ERC1-209ENST00000539007 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
ERC1-209ENST00000539007 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
ERC1-209ENST00000539007 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
ERC1-209ENST00000539007 APLP2Q06481 763 aa16.37■□□□□ 0.21
ERC1-209ENST00000539007 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
ERC1-209ENST00000539007 DSG3P32926 999 aa16.29■□□□□ 0.2
ERC1-209ENST00000539007 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
ERC1-209ENST00000539007 ABCB7O75027 752 aa16.24■□□□□ 0.19
ERC1-209ENST00000539007 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
ERC1-209ENST00000539007 POLA2Q14181 598 aa16.05■□□□□ 0.16
ERC1-209ENST00000539007 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
ERC1-209ENST00000539007 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
ERC1-209ENST00000539007 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
ERC1-209ENST00000539007 FBLN2P98095 1184 aa15.51■□□□□ 0.07
ERC1-209ENST00000539007 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
ERC1-209ENST00000539007 ABCC9O60706 1549 aa15.35■□□□□ 0.05
ERC1-209ENST00000539007 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
ERC1-209ENST00000539007 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
ERC1-209ENST00000539007 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
ERC1-209ENST00000539007 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
ERC1-209ENST00000539007 ZNF692Q9BU19 519 aaPredicted RBP15.19■□□□□ 0.02
ERC1-209ENST00000539007 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
ERC1-209ENST00000539007 SSUH2Q9Y2M2 353 aa15.11■□□□□ 0.01
ERC1-209ENST00000539007 SPDYE4A6NLX3 237 aa15.03■□□□□ -0
ERC1-209ENST00000539007 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
ERC1-209ENST00000539007 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
ERC1-209ENST00000539007 CHRDL2Q6WN34 429 aa14.98□□□□□ -0.01
ERC1-209ENST00000539007 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
ERC1-209ENST00000539007 CCDC180Q9P1Z9 1646 aa14.87□□□□□ -0.03
ERC1-209ENST00000539007 SPDYE1Q8NFV5 336 aaPredicted RBP14.86□□□□□ -0.03
ERC1-209ENST00000539007 POTEHQ6S545 545 aa14.84□□□□□ -0.03
ERC1-209ENST00000539007 FKBP8Q14318 412 aa14.83□□□□□ -0.04
ERC1-209ENST00000539007 PIP4P2Q8N4L2 257 aa14.76□□□□□ -0.05
ERC1-209ENST00000539007 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.055e-6■■■□□ 14.9
ERC1-209ENST00000539007 PROM2Q8N271 834 aa14.7□□□□□ -0.06
ERC1-209ENST00000539007 PRR29P0C7W0 189 aa14.67□□□□□ -0.06
ERC1-209ENST00000539007 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
ERC1-209ENST00000539007 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
ERC1-209ENST00000539007 STAG3Q9UJ98 1225 aa14.58□□□□□ -0.08
ERC1-209ENST00000539007 CREBZFQ9NS37 354 aa14.45□□□□□ -0.1
ERC1-209ENST00000539007 RB1CC1Q8TDY2 1594 aa14.36□□□□□ -0.11
ERC1-209ENST00000539007 HAX1O00165 279 aa14.36□□□□□ -0.11
ERC1-209ENST00000539007 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
ERC1-209ENST00000539007 EVX2Q03828 476 aa14.29□□□□□ -0.12
ERC1-209ENST00000539007 MIER1Q8N108 512 aa14.29□□□□□ -0.12
ERC1-209ENST00000539007 MNX1P50219 401 aaPredicted RBP14.26□□□□□ -0.13
ERC1-209ENST00000539007 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
ERC1-209ENST00000539007 C19orf67A6NJJ6 358 aa14.23□□□□□ -0.13
ERC1-209ENST00000539007 PLCD3Q8N3E9 789 aa14.23□□□□□ -0.13
ERC1-209ENST00000539007 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
ERC1-209ENST00000539007 NACADO15069 1562 aa14.16□□□□□ -0.14
ERC1-209ENST00000539007 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
ERC1-209ENST00000539007 VASPP50552 380 aaPredicted RBP14.15□□□□□ -0.14
ERC1-209ENST00000539007 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
ERC1-209ENST00000539007 SP7Q8TDD2 431 aaPredicted RBP14.12□□□□□ -0.15
ERC1-209ENST00000539007 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
ERC1-209ENST00000539007 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
ERC1-209ENST00000539007 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
ERC1-209ENST00000539007 RASEFQ8IZ41 740 aa14□□□□□ -0.17
ERC1-209ENST00000539007 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
ERC1-209ENST00000539007 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms