RNA–Protein interactions for RNA: ENST00000536790.5

ZNF140-209, Transcript of zinc finger protein 140, humanhuman

TSL 1 (best)

Gene ZNF140, Length 2,328 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140-209ENST00000536790 AEBP2Q6ZN18 517 aaPredicted RBP17.23■□□□□ 0.35
ZNF140-209ENST00000536790 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
ZNF140-209ENST00000536790 PHF23Q9BUL5 403 aaPredicted RBP15.08■□□□□ 0
ZNF140-209ENST00000536790 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
ZNF140-209ENST00000536790 PLPPR3Q6T4P5 718 aa13.9□□□□□ -0.18
ZNF140-209ENST00000536790 FOXD1Q16676 465 aa13.45□□□□□ -0.26
ZNF140-209ENST00000536790 ADRA2BP18089 450 aa13.27□□□□□ -0.28
ZNF140-209ENST00000536790 PPP6R1Q9UPN7 881 aa13.27□□□□□ -0.29
ZNF140-209ENST00000536790 PIAS4Q8N2W9 510 aaPredicted RBP12.78□□□□□ -0.36
ZNF140-209ENST00000536790 KCNA4P22459 653 aa12.52□□□□□ -0.41
ZNF140-209ENST00000536790 PPP4R3CPQ6ZMV5 832 aa12.36□□□□□ -0.43
ZNF140-209ENST00000536790 NISCHQ9Y2I1 1504 aa12.19□□□□□ -0.46
ZNF140-209ENST00000536790 MSH5O43196 834 aa12.13□□□□□ -0.47
ZNF140-209ENST00000536790 EHMT2Q96KQ7 1210 aa12.11□□□□□ -0.47
ZNF140-209ENST00000536790 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
ZNF140-209ENST00000536790 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
ZNF140-209ENST00000536790 NPM3O75607 178 aaKnown RBP11.97□□□□□ -0.49
ZNF140-209ENST00000536790 SLC4A1APQ9BWU0 796 aaKnown RBP11.91□□□□□ -0.5
ZNF140-209ENST00000536790 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
ZNF140-209ENST00000536790 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
ZNF140-209ENST00000536790 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
ZNF140-209ENST00000536790 ZBTB22O15209 634 aa11.56□□□□□ -0.56
ZNF140-209ENST00000536790 DMRT2Q9Y5R5 561 aa11.55□□□□□ -0.56
ZNF140-209ENST00000536790 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
ZNF140-209ENST00000536790 HOXD11P31277 338 aaPredicted RBP11.41□□□□□ -0.58
ZNF140-209ENST00000536790 FOXD4L1Q9NU39 408 aa11.31□□□□□ -0.6
ZNF140-209ENST00000536790 DNAJC5BQ9UF47 199 aa11.27□□□□□ -0.61
ZNF140-209ENST00000536790 DCAF8L1A6NGE4 600 aa11.25□□□□□ -0.61
ZNF140-209ENST00000536790 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
ZNF140-209ENST00000536790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.98□□□□□ -0.65
ZNF140-209ENST00000536790 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
ZNF140-209ENST00000536790 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
ZNF140-209ENST00000536790 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
ZNF140-209ENST00000536790 ATXN8OSP0DMR3 200 aa10.74□□□□□ -0.69
ZNF140-209ENST00000536790 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
ZNF140-209ENST00000536790 POTEDQ86YR6 584 aa10.65□□□□□ -0.7
ZNF140-209ENST00000536790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
ZNF140-209ENST00000536790 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
ZNF140-209ENST00000536790 CCDC180Q9P1Z9 1646 aa10.63□□□□□ -0.71
ZNF140-209ENST00000536790 FKBP8Q14318 412 aa10.58□□□□□ -0.72
ZNF140-209ENST00000536790 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
ZNF140-209ENST00000536790 TRHP20396 242 aaPredicted RBP10.5□□□□□ -0.73
ZNF140-209ENST00000536790 RNF39Q9H2S5 420 aa10.5□□□□□ -0.73
ZNF140-209ENST00000536790 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
ZNF140-209ENST00000536790 CAPN15O75808 1086 aa10.44□□□□□ -0.74
ZNF140-209ENST00000536790 APLP2Q06481 763 aa10.39□□□□□ -0.75
ZNF140-209ENST00000536790 ABCC9O60706 1549 aa10.36□□□□□ -0.75
ZNF140-209ENST00000536790 ABCB7O75027 752 aa10.35□□□□□ -0.75
ZNF140-209ENST00000536790 POLA2Q14181 598 aa10.35□□□□□ -0.75
ZNF140-209ENST00000536790 DCAF8L2P0C7V8 631 aa10.33□□□□□ -0.76
ZNF140-209ENST00000536790 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
ZNF140-209ENST00000536790 C1QBPQ07021 282 aaKnown RBP10.31□□□□□ -0.76
ZNF140-209ENST00000536790 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
ZNF140-209ENST00000536790 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
ZNF140-209ENST00000536790 ZCCHC6Q5VYS8 1495 aaKnown RBP10.17□□□□□ -0.78
ZNF140-209ENST00000536790 FBLN2P98095 1184 aa10.17□□□□□ -0.78
ZNF140-209ENST00000536790 DSG3P32926 999 aa10.13□□□□□ -0.79
ZNF140-209ENST00000536790 CACNB1Q02641 598 aaPredicted RBP10.06□□□□□ -0.8
ZNF140-209ENST00000536790 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
ZNF140-209ENST00000536790 OSCARQ8IYS5 282 aa10.04□□□□□ -0.8
ZNF140-209ENST00000536790 DCAF1Q9Y4B6 1507 aa10.03□□□□□ -0.8
ZNF140-209ENST00000536790 NACADO15069 1562 aa10.01□□□□□ -0.81
ZNF140-209ENST00000536790 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
ZNF140-209ENST00000536790 RB1CC1Q8TDY2 1594 aa9.97□□□□□ -0.81
ZNF140-209ENST00000536790 MYO15BQ96JP2 1530 aa9.97□□□□□ -0.81
ZNF140-209ENST00000536790 PROM2Q8N271 834 aa9.95□□□□□ -0.82
ZNF140-209ENST00000536790 SHROOM4Q9ULL8 1493 aa9.93□□□□□ -0.82
ZNF140-209ENST00000536790 ZNF692Q9BU19 519 aaPredicted RBP9.93□□□□□ -0.82
ZNF140-209ENST00000536790 FBXO3Q9UK99 471 aa9.92□□□□□ -0.82
ZNF140-209ENST00000536790 VASPP50552 380 aaPredicted RBP9.9□□□□□ -0.82
ZNF140-209ENST00000536790 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
ZNF140-209ENST00000536790 IFNLR1Q8IU57 520 aaPredicted RBP9.84□□□□□ -0.83
ZNF140-209ENST00000536790 SCRIBQ14160 1630 aa9.84□□□□□ -0.83
ZNF140-209ENST00000536790 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
ZNF140-209ENST00000536790 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
ZNF140-209ENST00000536790 SPDYE2Q495Y8 402 aa9.82□□□□□ -0.84
ZNF140-209ENST00000536790 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
ZNF140-209ENST00000536790 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
ZNF140-209ENST00000536790 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
ZNF140-209ENST00000536790 UNC13AQ9UPW8 1703 aa9.67□□□□□ -0.86
ZNF140-209ENST00000536790 SLC24A1O60721 1099 aa9.66□□□□□ -0.86
ZNF140-209ENST00000536790 MIER1Q8N108 512 aa9.66□□□□□ -0.86
ZNF140-209ENST00000536790 BICRAQ9NZM4 1560 aa9.64□□□□□ -0.87
ZNF140-209ENST00000536790 PKD2Q13563 968 aa9.61□□□□□ -0.87
ZNF140-209ENST00000536790 STAG3Q9UJ98 1225 aa9.6□□□□□ -0.87
ZNF140-209ENST00000536790 CLEC11AQ9Y240 323 aa9.59□□□□□ -0.87
ZNF140-209ENST00000536790 SPOCK2Q92563 424 aa9.56□□□□□ -0.88
ZNF140-209ENST00000536790 RBM42Q9BTD8 480 aaKnown RBP9.52□□□□□ -0.89
ZNF140-209ENST00000536790 CECR2Q9BXF3 1484 aa9.51□□□□□ -0.89
ZNF140-209ENST00000536790 SUPT5HO00267 1087 aaKnown RBP9.5□□□□□ -0.89
ZNF140-209ENST00000536790 REM2Q8IYK8 340 aaPredicted RBP9.5□□□□□ -0.89
ZNF140-209ENST00000536790 AKT1S1Q96B36 256 aa9.49□□□□□ -0.89
ZNF140-209ENST00000536790 CIZ1Q9ULV3 898 aaPredicted RBP9.49□□□□□ -0.89
ZNF140-209ENST00000536790 ECM2O94769 699 aaPredicted RBP9.49□□□□□ -0.89
ZNF140-209ENST00000536790 SPDYE1Q8NFV5 336 aaPredicted RBP9.47□□□□□ -0.89
ZNF140-209ENST00000536790 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
ZNF140-209ENST00000536790 PRR29P0C7W0 189 aa9.44□□□□□ -0.9
ZNF140-209ENST00000536790 RGL2O15211 777 aa9.44□□□□□ -0.9
ZNF140-209ENST00000536790 PITPNM1O00562 1244 aa9.42□□□□□ -0.9
ZNF140-209ENST00000536790 MROH2BQ7Z745 1585 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms