RNA–Protein interactions for RNA: ENST00000534596.5

MS4A6A-221, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 4

Gene MS4A6A, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-221ENST00000534596 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
MS4A6A-221ENST00000534596 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
MS4A6A-221ENST00000534596 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
MS4A6A-221ENST00000534596 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
MS4A6A-221ENST00000534596 FOXD1Q16676 465 aa17.46■□□□□ 0.39
MS4A6A-221ENST00000534596 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
MS4A6A-221ENST00000534596 MSH5O43196 834 aa16.45■□□□□ 0.22
MS4A6A-221ENST00000534596 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
MS4A6A-221ENST00000534596 PIAS4Q8N2W9 510 aaPredicted RBP16.25■□□□□ 0.19
MS4A6A-221ENST00000534596 PPP6R1Q9UPN7 881 aa16.13■□□□□ 0.17
MS4A6A-221ENST00000534596 ADRA2BP18089 450 aa16.06■□□□□ 0.16
MS4A6A-221ENST00000534596 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
MS4A6A-221ENST00000534596 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
MS4A6A-221ENST00000534596 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
MS4A6A-221ENST00000534596 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
MS4A6A-221ENST00000534596 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
MS4A6A-221ENST00000534596 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
MS4A6A-221ENST00000534596 HOXD11P31277 338 aaPredicted RBP14.16□□□□□ -0.14
MS4A6A-221ENST00000534596 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
MS4A6A-221ENST00000534596 RNF39Q9H2S5 420 aa14.02□□□□□ -0.17
MS4A6A-221ENST00000534596 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
MS4A6A-221ENST00000534596 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
MS4A6A-221ENST00000534596 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
MS4A6A-221ENST00000534596 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
MS4A6A-221ENST00000534596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
MS4A6A-221ENST00000534596 NPM3O75607 178 aaKnown RBP13.43□□□□□ -0.26
MS4A6A-221ENST00000534596 U3KPZ7 1027 aaPredicted RBP13.18□□□□□ -0.3
MS4A6A-221ENST00000534596 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
MS4A6A-221ENST00000534596 CAPN15O75808 1086 aa13.03□□□□□ -0.32
MS4A6A-221ENST00000534596 DSG3P32926 999 aa13.03□□□□□ -0.32
MS4A6A-221ENST00000534596 KCNA4P22459 653 aa12.93□□□□□ -0.34
MS4A6A-221ENST00000534596 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
MS4A6A-221ENST00000534596 POTEHQ6S545 545 aa12.87□□□□□ -0.35
MS4A6A-221ENST00000534596 APLP2Q06481 763 aa12.77□□□□□ -0.37
MS4A6A-221ENST00000534596 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
MS4A6A-221ENST00000534596 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
MS4A6A-221ENST00000534596 NISCHQ9Y2I1 1504 aa12.72□□□□□ -0.37
MS4A6A-221ENST00000534596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.71□□□□□ -0.37
MS4A6A-221ENST00000534596 ABCB7O75027 752 aa12.71□□□□□ -0.37
MS4A6A-221ENST00000534596 HNRNPUL2Q1KMD3 747 aaKnown RBP12.71□□□□□ -0.37
MS4A6A-221ENST00000534596 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
MS4A6A-221ENST00000534596 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
MS4A6A-221ENST00000534596 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
MS4A6A-221ENST00000534596 POLA2Q14181 598 aa12.36□□□□□ -0.43
MS4A6A-221ENST00000534596 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
MS4A6A-221ENST00000534596 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
MS4A6A-221ENST00000534596 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
MS4A6A-221ENST00000534596 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.46
MS4A6A-221ENST00000534596 AKT1S1Q96B36 256 aa12.11□□□□□ -0.47
MS4A6A-221ENST00000534596 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
MS4A6A-221ENST00000534596 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
MS4A6A-221ENST00000534596 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
MS4A6A-221ENST00000534596 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
MS4A6A-221ENST00000534596 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
MS4A6A-221ENST00000534596 ZBTB22O15209 634 aa11.9□□□□□ -0.5
MS4A6A-221ENST00000534596 PITPNM1O00562 1244 aa11.87□□□□□ -0.51
MS4A6A-221ENST00000534596 ATXN8OSP0DMR3 200 aa11.82□□□□□ -0.52
MS4A6A-221ENST00000534596 FXR2P51116 673 aaKnown RBP eCLIP11.82□□□□□ -0.52
MS4A6A-221ENST00000534596 HAX1O00165 279 aa11.76□□□□□ -0.53
MS4A6A-221ENST00000534596 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
MS4A6A-221ENST00000534596 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
MS4A6A-221ENST00000534596 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.53
MS4A6A-221ENST00000534596 FBLN2P98095 1184 aa11.7□□□□□ -0.54
MS4A6A-221ENST00000534596 EVX2Q03828 476 aa11.61□□□□□ -0.55
MS4A6A-221ENST00000534596 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
MS4A6A-221ENST00000534596 SPDYE1Q8NFV5 336 aaPredicted RBP11.57□□□□□ -0.56
MS4A6A-221ENST00000534596 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
MS4A6A-221ENST00000534596 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
MS4A6A-221ENST00000534596 SSUH2Q9Y2M2 353 aa11.54□□□□□ -0.56
MS4A6A-221ENST00000534596 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
MS4A6A-221ENST00000534596 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
MS4A6A-221ENST00000534596 CHADLQ6NUI6 762 aa11.36□□□□□ -0.59
MS4A6A-221ENST00000534596 GABBR2O75899 941 aa11.34□□□□□ -0.59
MS4A6A-221ENST00000534596 PABPN1Q86U42 306 aaKnown RBP eCLIP11.34□□□□□ -0.59
MS4A6A-221ENST00000534596 PRR29P0C7W0 189 aa11.32□□□□□ -0.6
MS4A6A-221ENST00000534596 CCDC180Q9P1Z9 1646 aa11.28□□□□□ -0.6
MS4A6A-221ENST00000534596 LHX8Q68G74 356 aa11.2□□□□□ -0.62
MS4A6A-221ENST00000534596 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
MS4A6A-221ENST00000534596 FARP1Q9Y4F1 1045 aaPredicted RBP11.17□□□□□ -0.62
MS4A6A-221ENST00000534596 CSRNP3Q8WYN3 585 aa11.11□□□□□ -0.63
MS4A6A-221ENST00000534596 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
MS4A6A-221ENST00000534596 CLCN6P51797 869 aa11.09□□□□□ -0.63
MS4A6A-221ENST00000534596 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
MS4A6A-221ENST00000534596 CREBZFQ9NS37 354 aa11□□□□□ -0.65
MS4A6A-221ENST00000534596 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
MS4A6A-221ENST00000534596 ZRANB1Q9UGI0 708 aa10.97□□□□□ -0.65
MS4A6A-221ENST00000534596 DCBLD2Q96PD2 775 aa10.96□□□□□ -0.65
MS4A6A-221ENST00000534596 SPDYE4A6NLX3 237 aa10.9□□□□□ -0.66
MS4A6A-221ENST00000534596 GALR2O43603 387 aaPredicted RBP10.87□□□□□ -0.67
MS4A6A-221ENST00000534596 ABCC9O60706 1549 aa10.84□□□□□ -0.67
MS4A6A-221ENST00000534596 PAK3O75914 559 aaPredicted RBP10.82□□□□□ -0.68
MS4A6A-221ENST00000534596 EHMT2Q96KQ7 1210 aa10.81□□□□□ -0.68
MS4A6A-221ENST00000534596 PHF12Q96QT6 1004 aa10.8□□□□□ -0.68
MS4A6A-221ENST00000534596 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
MS4A6A-221ENST00000534596 MNX1P50219 401 aaPredicted RBP10.78□□□□□ -0.68
MS4A6A-221ENST00000534596 OTUD5Q96G74 571 aa10.74□□□□□ -0.69
MS4A6A-221ENST00000534596 POTEB2H3BUK9 544 aa10.72□□□□□ -0.69
MS4A6A-221ENST00000534596 PELP1Q8IZL8 1130 aaKnown RBP10.69□□□□□ -0.7
MS4A6A-221ENST00000534596 PLSCR2Q9NRY7 297 aa10.66□□□□□ -0.7
MS4A6A-221ENST00000534596 MS4A3Q96HJ5 214 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms