RNA–Protein interactions for RNA: ENST00000532713.1

LINC00964-208, long intergenic non-protein coding RNA 964, humanhuman

TSL 4

Gene LINC00964, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00964-208ENST00000532713 AEBP2Q6ZN18 517 aaPredicted RBP18.82■□□□□ 0.6
LINC00964-208ENST00000532713 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
LINC00964-208ENST00000532713 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
LINC00964-208ENST00000532713 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
LINC00964-208ENST00000532713 FOXD1Q16676 465 aa14.86□□□□□ -0.03
LINC00964-208ENST00000532713 PLPPR3Q6T4P5 718 aa14.76□□□□□ -0.05
LINC00964-208ENST00000532713 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
LINC00964-208ENST00000532713 ADRA2BP18089 450 aa14.22□□□□□ -0.13
LINC00964-208ENST00000532713 PIAS4Q8N2W9 510 aaPredicted RBP13.98□□□□□ -0.17
LINC00964-208ENST00000532713 MSH5O43196 834 aa13.72□□□□□ -0.21
LINC00964-208ENST00000532713 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
LINC00964-208ENST00000532713 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
LINC00964-208ENST00000532713 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.33
LINC00964-208ENST00000532713 KCNA4P22459 653 aa12.9□□□□□ -0.34
LINC00964-208ENST00000532713 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
LINC00964-208ENST00000532713 DMRT2Q9Y5R5 561 aa12.72□□□□□ -0.37
LINC00964-208ENST00000532713 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
LINC00964-208ENST00000532713 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
LINC00964-208ENST00000532713 NCBP3Q53F19 620 aaKnown RBP12.63□□□□□ -0.39
LINC00964-208ENST00000532713 NISCHQ9Y2I1 1504 aa12.45□□□□□ -0.42
LINC00964-208ENST00000532713 NPM3O75607 178 aaKnown RBP12.43□□□□□ -0.42
LINC00964-208ENST00000532713 RNF216Q9NWF9 866 aaPredicted RBP12.43□□□□□ -0.42
LINC00964-208ENST00000532713 HOXD11P31277 338 aaPredicted RBP12.4□□□□□ -0.42
LINC00964-208ENST00000532713 SLC4A1APQ9BWU0 796 aaKnown RBP12.3□□□□□ -0.44
LINC00964-208ENST00000532713 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
LINC00964-208ENST00000532713 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
LINC00964-208ENST00000532713 DNAJC5BQ9UF47 199 aa12.01□□□□□ -0.49
LINC00964-208ENST00000532713 ZBTB22O15209 634 aa11.91□□□□□ -0.5
LINC00964-208ENST00000532713 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00964-208ENST00000532713 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
LINC00964-208ENST00000532713 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
LINC00964-208ENST00000532713 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
LINC00964-208ENST00000532713 C1QBPQ07021 282 aaKnown RBP11.6□□□□□ -0.55
LINC00964-208ENST00000532713 FOXD4L1Q9NU39 408 aa11.6□□□□□ -0.55
LINC00964-208ENST00000532713 CACNB1Q02641 598 aaPredicted RBP11.59□□□□□ -0.55
LINC00964-208ENST00000532713 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
LINC00964-208ENST00000532713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
LINC00964-208ENST00000532713 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
LINC00964-208ENST00000532713 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
LINC00964-208ENST00000532713 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
LINC00964-208ENST00000532713 CAPN15O75808 1086 aa11.35□□□□□ -0.59
LINC00964-208ENST00000532713 APLP2Q06481 763 aa11.34□□□□□ -0.59
LINC00964-208ENST00000532713 TRHP20396 242 aaPredicted RBP11.28□□□□□ -0.6
LINC00964-208ENST00000532713 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
LINC00964-208ENST00000532713 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
LINC00964-208ENST00000532713 ATXN8OSP0DMR3 200 aa11.17□□□□□ -0.62
LINC00964-208ENST00000532713 DSG3P32926 999 aa11.16□□□□□ -0.62
LINC00964-208ENST00000532713 ABCB7O75027 752 aa11.13□□□□□ -0.63
LINC00964-208ENST00000532713 POLA2Q14181 598 aa11.05□□□□□ -0.64
LINC00964-208ENST00000532713 FKBP8Q14318 412 aa11.01□□□□□ -0.65
LINC00964-208ENST00000532713 RTN4Q9NQC3 1192 aaKnown RBP10.98□□□□□ -0.65
LINC00964-208ENST00000532713 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
LINC00964-208ENST00000532713 AMER1Q5JTC6 1135 aaPredicted RBP10.8□□□□□ -0.68
LINC00964-208ENST00000532713 ZBTB12Q9Y330 459 aaPredicted RBP10.8□□□□□ -0.68
LINC00964-208ENST00000532713 FBLN2P98095 1184 aa10.75□□□□□ -0.69
LINC00964-208ENST00000532713 MKRN4PQ13434 485 aaPredicted RBP10.7□□□□□ -0.7
LINC00964-208ENST00000532713 OSCARQ8IYS5 282 aa10.66□□□□□ -0.7
LINC00964-208ENST00000532713 SLC24A1O60721 1099 aa10.65□□□□□ -0.7
LINC00964-208ENST00000532713 RBM42Q9BTD8 480 aaKnown RBP10.61□□□□□ -0.71
LINC00964-208ENST00000532713 ZCCHC6Q5VYS8 1495 aaKnown RBP10.59□□□□□ -0.71
LINC00964-208ENST00000532713 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.73
LINC00964-208ENST00000532713 SPDYE6P0CI01 402 aa10.52□□□□□ -0.73
LINC00964-208ENST00000532713 SPDYE2Q495Y8 402 aa10.52□□□□□ -0.73
LINC00964-208ENST00000532713 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
LINC00964-208ENST00000532713 AKT1S1Q96B36 256 aa10.47□□□□□ -0.73
LINC00964-208ENST00000532713 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
LINC00964-208ENST00000532713 DCAF1Q9Y4B6 1507 aa10.43□□□□□ -0.74
LINC00964-208ENST00000532713 SSUH2Q9Y2M2 353 aa10.4□□□□□ -0.74
LINC00964-208ENST00000532713 REM2Q8IYK8 340 aaPredicted RBP10.39□□□□□ -0.75
LINC00964-208ENST00000532713 PABPN1Q86U42 306 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC00964-208ENST00000532713 SHROOM4Q9ULL8 1493 aa10.3□□□□□ -0.76
LINC00964-208ENST00000532713 FBXO3Q9UK99 471 aa10.3□□□□□ -0.76
LINC00964-208ENST00000532713 PROM2Q8N271 834 aa10.27□□□□□ -0.77
LINC00964-208ENST00000532713 PITPNM1O00562 1244 aa10.26□□□□□ -0.77
LINC00964-208ENST00000532713 CLEC11AQ9Y240 323 aa10.26□□□□□ -0.77
LINC00964-208ENST00000532713 VASPP50552 380 aaPredicted RBP10.25□□□□□ -0.77
LINC00964-208ENST00000532713 CHRDL2Q6WN34 429 aa10.24□□□□□ -0.77
LINC00964-208ENST00000532713 SPDYE1Q8NFV5 336 aaPredicted RBP10.24□□□□□ -0.77
LINC00964-208ENST00000532713 IFNLR1Q8IU57 520 aaPredicted RBP10.21□□□□□ -0.77
LINC00964-208ENST00000532713 SUPT5HO00267 1087 aaKnown RBP10.2□□□□□ -0.78
LINC00964-208ENST00000532713 PRR29P0C7W0 189 aa10.14□□□□□ -0.79
LINC00964-208ENST00000532713 STAG3Q9UJ98 1225 aa10.13□□□□□ -0.79
LINC00964-208ENST00000532713 DCAF8L2P0C7V8 631 aa10.12□□□□□ -0.79
LINC00964-208ENST00000532713 ABCC9O60706 1549 aa10.11□□□□□ -0.79
LINC00964-208ENST00000532713 MYO15BQ96JP2 1530 aa10.11□□□□□ -0.79
LINC00964-208ENST00000532713 PIP4P2Q8N4L2 257 aa10.1□□□□□ -0.79
LINC00964-208ENST00000532713 HRCP23327 699 aa10.09□□□□□ -0.79
LINC00964-208ENST00000532713 FXR2P51116 673 aaKnown RBP eCLIP10.08□□□□□ -0.8
LINC00964-208ENST00000532713 PKD2Q13563 968 aa10.07□□□□□ -0.8
LINC00964-208ENST00000532713 POTEHQ6S545 545 aa10.07□□□□□ -0.8
LINC00964-208ENST00000532713 PLCB2Q00722 1185 aa10.03□□□□□ -0.8
LINC00964-208ENST00000532713 PRKAR2AP13861 404 aaKnown RBP10.02□□□□□ -0.81
LINC00964-208ENST00000532713 CHADLQ6NUI6 762 aa10.02□□□□□ -0.81
LINC00964-208ENST00000532713 KLHL34Q8N239 644 aa10□□□□□ -0.81
LINC00964-208ENST00000532713 HAP1P54257 671 aaPredicted RBP9.97□□□□□ -0.81
LINC00964-208ENST00000532713 CREBZFQ9NS37 354 aa9.95□□□□□ -0.82
LINC00964-208ENST00000532713 MIER1Q8N108 512 aa9.93□□□□□ -0.82
LINC00964-208ENST00000532713 SPOCK2Q92563 424 aa9.93□□□□□ -0.82
LINC00964-208ENST00000532713 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
LINC00964-208ENST00000532713 ECM2O94769 699 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms