RNA–Protein interactions for RNA: ENST00000531717.1

TRIM68-205, Transcript of tripartite motif containing 68, humanhuman

TSL 4

Gene TRIM68, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM68-205ENST00000531717 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
TRIM68-205ENST00000531717 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
TRIM68-205ENST00000531717 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
TRIM68-205ENST00000531717 SENP3Q9H4L4 574 aaPredicted RBP19.08■□□□□ 0.64
TRIM68-205ENST00000531717 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
TRIM68-205ENST00000531717 FOXD1Q16676 465 aa17.7■□□□□ 0.42
TRIM68-205ENST00000531717 ADRA2BP18089 450 aa17.69■□□□□ 0.42
TRIM68-205ENST00000531717 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
TRIM68-205ENST00000531717 KCNA4P22459 653 aa17.08■□□□□ 0.32
TRIM68-205ENST00000531717 PIAS4Q8N2W9 510 aaPredicted RBP16.82■□□□□ 0.28
TRIM68-205ENST00000531717 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
TRIM68-205ENST00000531717 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
TRIM68-205ENST00000531717 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
TRIM68-205ENST00000531717 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
TRIM68-205ENST00000531717 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
TRIM68-205ENST00000531717 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
TRIM68-205ENST00000531717 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
TRIM68-205ENST00000531717 SCAF1Q9H7N4 1312 aaKnown RBP16.03■□□□□ 0.16
TRIM68-205ENST00000531717 MSH5O43196 834 aa15.96■□□□□ 0.15
TRIM68-205ENST00000531717 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
TRIM68-205ENST00000531717 ZBTB22O15209 634 aa15.75■□□□□ 0.11
TRIM68-205ENST00000531717 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
TRIM68-205ENST00000531717 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
TRIM68-205ENST00000531717 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
TRIM68-205ENST00000531717 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
TRIM68-205ENST00000531717 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
TRIM68-205ENST00000531717 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
TRIM68-205ENST00000531717 MYCNP04198 464 aaPredicted RBP14.9□□□□□ -0.02
TRIM68-205ENST00000531717 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
TRIM68-205ENST00000531717 ATXN8OSP0DMR3 200 aa14.86□□□□□ -0.03
TRIM68-205ENST00000531717 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
TRIM68-205ENST00000531717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRIM68-205ENST00000531717 FKBP8Q14318 412 aa14.6□□□□□ -0.07
TRIM68-205ENST00000531717 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
TRIM68-205ENST00000531717 RTN4Q9NQC3 1192 aaKnown RBP14.5□□□□□ -0.09
TRIM68-205ENST00000531717 U3KPZ7 1027 aaPredicted RBP14.45□□□□□ -0.1
TRIM68-205ENST00000531717 AMER1Q5JTC6 1135 aaPredicted RBP14.44□□□□□ -0.1
TRIM68-205ENST00000531717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.43□□□□□ -0.1
TRIM68-205ENST00000531717 HNRNPUL2Q1KMD3 747 aaKnown RBP14.43□□□□□ -0.1
TRIM68-205ENST00000531717 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
TRIM68-205ENST00000531717 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
TRIM68-205ENST00000531717 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
TRIM68-205ENST00000531717 APLP2Q06481 763 aa14.09□□□□□ -0.15
TRIM68-205ENST00000531717 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
TRIM68-205ENST00000531717 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
TRIM68-205ENST00000531717 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
TRIM68-205ENST00000531717 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
TRIM68-205ENST00000531717 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
TRIM68-205ENST00000531717 POLA2Q14181 598 aa13.82□□□□□ -0.2
TRIM68-205ENST00000531717 FBLN2P98095 1184 aa13.8□□□□□ -0.2
TRIM68-205ENST00000531717 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
TRIM68-205ENST00000531717 CAPN15O75808 1086 aa13.77□□□□□ -0.21
TRIM68-205ENST00000531717 PROM2Q8N271 834 aa13.75□□□□□ -0.21
TRIM68-205ENST00000531717 VASPP50552 380 aaPredicted RBP13.65□□□□□ -0.22
TRIM68-205ENST00000531717 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
TRIM68-205ENST00000531717 ABCB7O75027 752 aa13.59□□□□□ -0.23
TRIM68-205ENST00000531717 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
TRIM68-205ENST00000531717 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
TRIM68-205ENST00000531717 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
TRIM68-205ENST00000531717 DSG3P32926 999 aa13.38□□□□□ -0.27
TRIM68-205ENST00000531717 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
TRIM68-205ENST00000531717 PKD2Q13563 968 aa13.37□□□□□ -0.27
TRIM68-205ENST00000531717 DCAF8L2P0C7V8 631 aa13.35□□□□□ -0.27
TRIM68-205ENST00000531717 PLCB2Q00722 1185 aa13.35□□□□□ -0.27
TRIM68-205ENST00000531717 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
TRIM68-205ENST00000531717 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
TRIM68-205ENST00000531717 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
TRIM68-205ENST00000531717 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
TRIM68-205ENST00000531717 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
TRIM68-205ENST00000531717 SPOCK2Q92563 424 aa13.26□□□□□ -0.29
TRIM68-205ENST00000531717 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
TRIM68-205ENST00000531717 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
TRIM68-205ENST00000531717 CCDC180Q9P1Z9 1646 aa13.22□□□□□ -0.29
TRIM68-205ENST00000531717 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRIM68-205ENST00000531717 HAP1P54257 671 aaPredicted RBP13.19□□□□□ -0.3
TRIM68-205ENST00000531717 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
TRIM68-205ENST00000531717 MIER1Q8N108 512 aa13.16□□□□□ -0.3
TRIM68-205ENST00000531717 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
TRIM68-205ENST00000531717 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRIM68-205ENST00000531717 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
TRIM68-205ENST00000531717 RGL2O15211 777 aa13.02□□□□□ -0.33
TRIM68-205ENST00000531717 ABCC9O60706 1549 aa13.02□□□□□ -0.33
TRIM68-205ENST00000531717 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
TRIM68-205ENST00000531717 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
TRIM68-205ENST00000531717 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
TRIM68-205ENST00000531717 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
TRIM68-205ENST00000531717 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
TRIM68-205ENST00000531717 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
TRIM68-205ENST00000531717 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
TRIM68-205ENST00000531717 ZBTB47Q9UFB7 747 aaPredicted RBP12.92□□□□□ -0.34
TRIM68-205ENST00000531717 KDM2AQ9Y2K7 1162 aa12.87□□□□□ -0.35
TRIM68-205ENST00000531717 BCANQ96GW7 911 aa12.86□□□□□ -0.35
TRIM68-205ENST00000531717 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
TRIM68-205ENST00000531717 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
TRIM68-205ENST00000531717 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
TRIM68-205ENST00000531717 TSHZ2Q9NRE2 1034 aa12.77□□□□□ -0.37
TRIM68-205ENST00000531717 NUBP1P53384 320 aa12.74□□□□□ -0.37
TRIM68-205ENST00000531717 GSE1Q14687 1217 aa12.74□□□□□ -0.37
TRIM68-205ENST00000531717 PRKCSHP14314 528 aaPredicted RBP12.73□□□□□ -0.37
TRIM68-205ENST00000531717 DCAF8Q5TAQ9 597 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms