RNA–Protein interactions for RNA: ENST00000528925.1

MS4A6A-209, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 4

Gene MS4A6A, Length 509 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-209ENST00000528925 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
MS4A6A-209ENST00000528925 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
MS4A6A-209ENST00000528925 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
MS4A6A-209ENST00000528925 PHF23Q9BUL5 403 aaPredicted RBP17.34■□□□□ 0.37
MS4A6A-209ENST00000528925 FOXD1Q16676 465 aa16.25■□□□□ 0.19
MS4A6A-209ENST00000528925 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
MS4A6A-209ENST00000528925 ADRA2BP18089 450 aa15.4■□□□□ 0.06
MS4A6A-209ENST00000528925 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
MS4A6A-209ENST00000528925 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
MS4A6A-209ENST00000528925 MSH5O43196 834 aa15.23■□□□□ 0.03
MS4A6A-209ENST00000528925 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
MS4A6A-209ENST00000528925 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
MS4A6A-209ENST00000528925 PPP4R3CPQ6ZMV5 832 aa14.09□□□□□ -0.15
MS4A6A-209ENST00000528925 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
MS4A6A-209ENST00000528925 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
MS4A6A-209ENST00000528925 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
MS4A6A-209ENST00000528925 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
MS4A6A-209ENST00000528925 RNF216Q9NWF9 866 aaPredicted RBP13.58□□□□□ -0.24
MS4A6A-209ENST00000528925 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
MS4A6A-209ENST00000528925 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
MS4A6A-209ENST00000528925 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
MS4A6A-209ENST00000528925 KCNA4P22459 653 aa13.42□□□□□ -0.26
MS4A6A-209ENST00000528925 NISCHQ9Y2I1 1504 aa13.33□□□□□ -0.28
MS4A6A-209ENST00000528925 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
MS4A6A-209ENST00000528925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13□□□□□ -0.33
MS4A6A-209ENST00000528925 RNF39Q9H2S5 420 aa12.93□□□□□ -0.34
MS4A6A-209ENST00000528925 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
MS4A6A-209ENST00000528925 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
MS4A6A-209ENST00000528925 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
MS4A6A-209ENST00000528925 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
MS4A6A-209ENST00000528925 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
MS4A6A-209ENST00000528925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.6□□□□□ -0.39
MS4A6A-209ENST00000528925 HNRNPUL2Q1KMD3 747 aaKnown RBP12.6□□□□□ -0.39
MS4A6A-209ENST00000528925 APLP2Q06481 763 aa12.57□□□□□ -0.4
MS4A6A-209ENST00000528925 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
MS4A6A-209ENST00000528925 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
MS4A6A-209ENST00000528925 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
MS4A6A-209ENST00000528925 CAPN15O75808 1086 aa12.43□□□□□ -0.42
MS4A6A-209ENST00000528925 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
MS4A6A-209ENST00000528925 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
MS4A6A-209ENST00000528925 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
MS4A6A-209ENST00000528925 ZBTB22O15209 634 aa12.27□□□□□ -0.45
MS4A6A-209ENST00000528925 DSG3P32926 999 aa12.21□□□□□ -0.45
MS4A6A-209ENST00000528925 ATXN8OSP0DMR3 200 aa12.14□□□□□ -0.47
MS4A6A-209ENST00000528925 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
MS4A6A-209ENST00000528925 ABCB7O75027 752 aa12.09□□□□□ -0.47
MS4A6A-209ENST00000528925 CSRNP3Q8WYN3 585 aa12.05□□□□□ -0.48
MS4A6A-209ENST00000528925 POLA2Q14181 598 aa12.02□□□□□ -0.49
MS4A6A-209ENST00000528925 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
MS4A6A-209ENST00000528925 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
MS4A6A-209ENST00000528925 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
MS4A6A-209ENST00000528925 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
MS4A6A-209ENST00000528925 FBLN2P98095 1184 aa11.75□□□□□ -0.53
MS4A6A-209ENST00000528925 ABCC9O60706 1549 aa11.69□□□□□ -0.54
MS4A6A-209ENST00000528925 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
MS4A6A-209ENST00000528925 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
MS4A6A-209ENST00000528925 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
MS4A6A-209ENST00000528925 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
MS4A6A-209ENST00000528925 AKT1S1Q96B36 256 aa11.52□□□□□ -0.57
MS4A6A-209ENST00000528925 MKRN4PQ13434 485 aaPredicted RBP11.5□□□□□ -0.57
MS4A6A-209ENST00000528925 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
MS4A6A-209ENST00000528925 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
MS4A6A-209ENST00000528925 SSUH2Q9Y2M2 353 aa11.32□□□□□ -0.6
MS4A6A-209ENST00000528925 CHRDL2Q6WN34 429 aa11.31□□□□□ -0.6
MS4A6A-209ENST00000528925 RB1CC1Q8TDY2 1594 aa11.3□□□□□ -0.6
MS4A6A-209ENST00000528925 NACADO15069 1562 aa11.28□□□□□ -0.6
MS4A6A-209ENST00000528925 SPDYE1Q8NFV5 336 aaPredicted RBP11.26□□□□□ -0.61
MS4A6A-209ENST00000528925 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
MS4A6A-209ENST00000528925 POTEHQ6S545 545 aa11.23□□□□□ -0.61
MS4A6A-209ENST00000528925 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
MS4A6A-209ENST00000528925 SLC24A1O60721 1099 aa11.22□□□□□ -0.61
MS4A6A-209ENST00000528925 MYO15BQ96JP2 1530 aa11.22□□□□□ -0.61
MS4A6A-209ENST00000528925 PITPNM1O00562 1244 aa11.21□□□□□ -0.61
MS4A6A-209ENST00000528925 CLEC11AQ9Y240 323 aa11.18□□□□□ -0.62
MS4A6A-209ENST00000528925 DCAF8L2P0C7V8 631 aa11.1□□□□□ -0.63
MS4A6A-209ENST00000528925 STAG3Q9UJ98 1225 aa11.1□□□□□ -0.63
MS4A6A-209ENST00000528925 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
MS4A6A-209ENST00000528925 ZCCHC6Q5VYS8 1495 aaKnown RBP11.07□□□□□ -0.64
MS4A6A-209ENST00000528925 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
MS4A6A-209ENST00000528925 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
MS4A6A-209ENST00000528925 FXR2P51116 673 aaKnown RBP eCLIP11.06□□□□□ -0.64
MS4A6A-209ENST00000528925 UNC13AQ9UPW8 1703 aa11.02□□□□□ -0.65
MS4A6A-209ENST00000528925 FKBP8Q14318 412 aa10.97□□□□□ -0.65
MS4A6A-209ENST00000528925 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
MS4A6A-209ENST00000528925 PROM2Q8N271 834 aa10.94□□□□□ -0.66
MS4A6A-209ENST00000528925 SHROOM4Q9ULL8 1493 aa10.91□□□□□ -0.66
MS4A6A-209ENST00000528925 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.66
MS4A6A-209ENST00000528925 HAX1O00165 279 aa10.85□□□□□ -0.67
MS4A6A-209ENST00000528925 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
MS4A6A-209ENST00000528925 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
MS4A6A-209ENST00000528925 FBXO3Q9UK99 471 aa10.79□□□□□ -0.68
MS4A6A-209ENST00000528925 FARP1Q9Y4F1 1045 aaPredicted RBP10.79□□□□□ -0.68
MS4A6A-209ENST00000528925 SCRIBQ14160 1630 aa10.79□□□□□ -0.68
MS4A6A-209ENST00000528925 CREBZFQ9NS37 354 aa10.76□□□□□ -0.69
MS4A6A-209ENST00000528925 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
MS4A6A-209ENST00000528925 MIER1Q8N108 512 aa10.73□□□□□ -0.69
MS4A6A-209ENST00000528925 C19orf67A6NJJ6 358 aa10.7□□□□□ -0.7
MS4A6A-209ENST00000528925 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
MS4A6A-209ENST00000528925 SP7Q8TDD2 431 aaPredicted RBP10.69□□□□□ -0.7
MS4A6A-209ENST00000528925 ZBTB47Q9UFB7 747 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms