RNA–Protein interactions for RNA: ENST00000527511.1

AP002884.3-205, humanhuman

TSL 2

Gene AP002884.3, Length 597 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-205ENST00000527511 AEBP2Q6ZN18 517 aaPredicted RBP33.14■■■□□ 2.9
AP002884.3-205ENST00000527511 CHIC1Q5VXU3 224 aa32.65■■■□□ 2.82
AP002884.3-205ENST00000527511 PHF23Q9BUL5 403 aaPredicted RBP28.7■■■□□ 2.18
AP002884.3-205ENST00000527511 SENP3Q9H4L4 574 aaPredicted RBP28.17■■■□□ 2.1
AP002884.3-205ENST00000527511 PLPPR3Q6T4P5 718 aa26.66■■□□□ 1.86
AP002884.3-205ENST00000527511 FOXD1Q16676 465 aa26.07■■□□□ 1.76
AP002884.3-205ENST00000527511 ADRA2BP18089 450 aa25.25■■□□□ 1.63
AP002884.3-205ENST00000527511 PPP6R1Q9UPN7 881 aa25.24■■□□□ 1.63
AP002884.3-205ENST00000527511 PIAS4Q8N2W9 510 aaPredicted RBP24.67■■□□□ 1.54
AP002884.3-205ENST00000527511 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
AP002884.3-205ENST00000527511 MSH5O43196 834 aa24■■□□□ 1.43
AP002884.3-205ENST00000527511 PPP4R3CPQ6ZMV5 832 aa23.5■■□□□ 1.35
AP002884.3-205ENST00000527511 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
AP002884.3-205ENST00000527511 KCNA4P22459 653 aa23.18■■□□□ 1.3
AP002884.3-205ENST00000527511 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
AP002884.3-205ENST00000527511 MAPK8IP2Q13387 824 aaPredicted RBP22.84■■□□□ 1.25
AP002884.3-205ENST00000527511 CNKSR2Q8WXI2 1034 aa22.81■■□□□ 1.24
AP002884.3-205ENST00000527511 NPM3O75607 178 aaKnown RBP22.6■■□□□ 1.21
AP002884.3-205ENST00000527511 DMRT2Q9Y5R5 561 aa22.5■■□□□ 1.19
AP002884.3-205ENST00000527511 RNF216Q9NWF9 866 aaPredicted RBP22.3■■□□□ 1.16
AP002884.3-205ENST00000527511 SLC4A1APQ9BWU0 796 aaKnown RBP22.16■■□□□ 1.14
AP002884.3-205ENST00000527511 HOXD11P31277 338 aaPredicted RBP22.13■■□□□ 1.13
AP002884.3-205ENST00000527511 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
AP002884.3-205ENST00000527511 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
AP002884.3-205ENST00000527511 DCAF8L1A6NGE4 600 aa21.55■■□□□ 1.04
AP002884.3-205ENST00000527511 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
AP002884.3-205ENST00000527511 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
AP002884.3-205ENST00000527511 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
AP002884.3-205ENST00000527511 FOXD4L1Q9NU39 408 aa21.31■■□□□ 1
AP002884.3-205ENST00000527511 ZBTB22O15209 634 aa21.3■■□□□ 1
AP002884.3-205ENST00000527511 SLC4A2P04920 1241 aa21.25■□□□□ 0.99
AP002884.3-205ENST00000527511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.12■□□□□ 0.97
AP002884.3-205ENST00000527511 MYCNP04198 464 aaPredicted RBP20.91■□□□□ 0.94
AP002884.3-205ENST00000527511 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
AP002884.3-205ENST00000527511 ABCC9O60706 1549 aa20.71■□□□□ 0.91
AP002884.3-205ENST00000527511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
AP002884.3-205ENST00000527511 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
AP002884.3-205ENST00000527511 SAMD1Q6SPF0 538 aaPredicted RBP20.58■□□□□ 0.89
AP002884.3-205ENST00000527511 ATXN8OSP0DMR3 200 aa20.57■□□□□ 0.88
AP002884.3-205ENST00000527511 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
AP002884.3-205ENST00000527511 APLP2Q06481 763 aa20.41■□□□□ 0.86
AP002884.3-205ENST00000527511 C1QBPQ07021 282 aaKnown RBP20.36■□□□□ 0.85
AP002884.3-205ENST00000527511 DCAF8L2P0C7V8 631 aa20.31■□□□□ 0.84
AP002884.3-205ENST00000527511 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
AP002884.3-205ENST00000527511 ATF5Q9Y2D1 282 aaPredicted RBP20.27■□□□□ 0.84
AP002884.3-205ENST00000527511 SPINK5Q9NQ38 1064 aaPredicted RBP20.1■□□□□ 0.81
AP002884.3-205ENST00000527511 CAPN15O75808 1086 aa20.06■□□□□ 0.8
AP002884.3-205ENST00000527511 ZNF219Q9P2Y4 722 aaPredicted RBP20.05■□□□□ 0.8
AP002884.3-205ENST00000527511 DCAF1Q9Y4B6 1507 aa20.03■□□□□ 0.8
AP002884.3-205ENST00000527511 NACADO15069 1562 aa20.03■□□□□ 0.8
AP002884.3-205ENST00000527511 TRHP20396 242 aaPredicted RBP20.02■□□□□ 0.8
AP002884.3-205ENST00000527511 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
AP002884.3-205ENST00000527511 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
AP002884.3-205ENST00000527511 CACNB1Q02641 598 aaPredicted RBP19.88■□□□□ 0.77
AP002884.3-205ENST00000527511 POLA2Q14181 598 aa19.74■□□□□ 0.75
AP002884.3-205ENST00000527511 SCRIBQ14160 1630 aa19.66■□□□□ 0.74
AP002884.3-205ENST00000527511 ABCB7O75027 752 aa19.66■□□□□ 0.74
AP002884.3-205ENST00000527511 DSG3P32926 999 aa19.64■□□□□ 0.73
AP002884.3-205ENST00000527511 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
AP002884.3-205ENST00000527511 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
AP002884.3-205ENST00000527511 FBLN2P98095 1184 aa19.5■□□□□ 0.71
AP002884.3-205ENST00000527511 ZBTB12Q9Y330 459 aaPredicted RBP19.48■□□□□ 0.71
AP002884.3-205ENST00000527511 PABPN1Q86U42 306 aaKnown RBP eCLIP19.45■□□□□ 0.7
AP002884.3-205ENST00000527511 MKRN4PQ13434 485 aaPredicted RBP19.4■□□□□ 0.7
AP002884.3-205ENST00000527511 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
AP002884.3-205ENST00000527511 FKBP8Q14318 412 aa19.37■□□□□ 0.69
AP002884.3-205ENST00000527511 SPDYE4A6NLX3 237 aa19.14■□□□□ 0.65
AP002884.3-205ENST00000527511 OSCARQ8IYS5 282 aa19.03■□□□□ 0.64
AP002884.3-205ENST00000527511 SPDYE2BA6NHP3 402 aa18.95■□□□□ 0.62
AP002884.3-205ENST00000527511 SPDYE6P0CI01 402 aa18.95■□□□□ 0.62
AP002884.3-205ENST00000527511 SPDYE2Q495Y8 402 aa18.95■□□□□ 0.62
AP002884.3-205ENST00000527511 CECR2Q9BXF3 1484 aa18.92■□□□□ 0.62
AP002884.3-205ENST00000527511 ZNF692Q9BU19 519 aaPredicted RBP18.92■□□□□ 0.62
AP002884.3-205ENST00000527511 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
AP002884.3-205ENST00000527511 PROM2Q8N271 834 aa18.82■□□□□ 0.6
AP002884.3-205ENST00000527511 SSUH2Q9Y2M2 353 aa18.79■□□□□ 0.6
AP002884.3-205ENST00000527511 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
AP002884.3-205ENST00000527511 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
AP002884.3-205ENST00000527511 RBM42Q9BTD8 480 aaKnown RBP18.77■□□□□ 0.6
AP002884.3-205ENST00000527511 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
AP002884.3-205ENST00000527511 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
AP002884.3-205ENST00000527511 FBXO3Q9UK99 471 aa18.68■□□□□ 0.58
AP002884.3-205ENST00000527511 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
AP002884.3-205ENST00000527511 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
AP002884.3-205ENST00000527511 WIZO95785 1651 aa18.59■□□□□ 0.57
AP002884.3-205ENST00000527511 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.56
AP002884.3-205ENST00000527511 AKT1S1Q96B36 256 aa18.57■□□□□ 0.56
AP002884.3-205ENST00000527511 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
AP002884.3-205ENST00000527511 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
AP002884.3-205ENST00000527511 NCAPD3P42695 1498 aa18.47■□□□□ 0.55
AP002884.3-205ENST00000527511 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
AP002884.3-205ENST00000527511 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
AP002884.3-205ENST00000527511 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
AP002884.3-205ENST00000527511 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
AP002884.3-205ENST00000527511 VASPP50552 380 aaPredicted RBP18.36■□□□□ 0.53
AP002884.3-205ENST00000527511 REM2Q8IYK8 340 aaPredicted RBP18.36■□□□□ 0.53
AP002884.3-205ENST00000527511 SPDYE1Q8NFV5 336 aaPredicted RBP18.34■□□□□ 0.53
AP002884.3-205ENST00000527511 CLEC11AQ9Y240 323 aa18.24■□□□□ 0.51
AP002884.3-205ENST00000527511 CCDC88BA6NC98 1476 aa18.17■□□□□ 0.5
AP002884.3-205ENST00000527511 MIER1Q8N108 512 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms