RNA–Protein interactions for RNA: ENST00000527333.5

CKAP5-208, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 5

Gene CKAP5, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-208ENST00000527333 AEBP2Q6ZN18 517 aaPredicted RBP28.37■■■□□ 2.13
CKAP5-208ENST00000527333 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
CKAP5-208ENST00000527333 PHF23Q9BUL5 403 aaPredicted RBP24.35■■□□□ 1.49
CKAP5-208ENST00000527333 SENP3Q9H4L4 574 aaPredicted RBP24.22■■□□□ 1.47
CKAP5-208ENST00000527333 PLPPR3Q6T4P5 718 aa22.6■■□□□ 1.21
CKAP5-208ENST00000527333 FOXD1Q16676 465 aa22.4■■□□□ 1.18
CKAP5-208ENST00000527333 ADRA2BP18089 450 aa21.52■■□□□ 1.04
CKAP5-208ENST00000527333 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
CKAP5-208ENST00000527333 PIAS4Q8N2W9 510 aaPredicted RBP21.19■□□□□ 0.98
CKAP5-208ENST00000527333 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
CKAP5-208ENST00000527333 MSH5O43196 834 aa20.77■□□□□ 0.92
CKAP5-208ENST00000527333 PPP4R3CPQ6ZMV5 832 aa19.88■□□□□ 0.77
CKAP5-208ENST00000527333 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
CKAP5-208ENST00000527333 MAPK8IP2Q13387 824 aaPredicted RBP19.53■□□□□ 0.72
CKAP5-208ENST00000527333 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
CKAP5-208ENST00000527333 CNKSR2Q8WXI2 1034 aa19.36■□□□□ 0.69
CKAP5-208ENST00000527333 KCNA4P22459 653 aa19.33■□□□□ 0.68
CKAP5-208ENST00000527333 DMRT2Q9Y5R5 561 aa19.28■□□□□ 0.68
CKAP5-208ENST00000527333 NPM3O75607 178 aaKnown RBP19.03■□□□□ 0.64
CKAP5-208ENST00000527333 RNF216Q9NWF9 866 aaPredicted RBP18.97■□□□□ 0.63
CKAP5-208ENST00000527333 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
CKAP5-208ENST00000527333 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
CKAP5-208ENST00000527333 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
CKAP5-208ENST00000527333 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
CKAP5-208ENST00000527333 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
CKAP5-208ENST00000527333 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
CKAP5-208ENST00000527333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.484e-9■□□□□ 9.6
CKAP5-208ENST00000527333 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
CKAP5-208ENST00000527333 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
CKAP5-208ENST00000527333 FOXD4L1Q9NU39 408 aa17.85■□□□□ 0.45
CKAP5-208ENST00000527333 ZBTB22O15209 634 aa17.72■□□□□ 0.43
CKAP5-208ENST00000527333 RNF39Q9H2S5 420 aa17.72■□□□□ 0.43
CKAP5-208ENST00000527333 U3KPZ7 1027 aaPredicted RBP17.66■□□□□ 0.42
CKAP5-208ENST00000527333 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
CKAP5-208ENST00000527333 MYCNP04198 464 aaPredicted RBP17.64■□□□□ 0.41
CKAP5-208ENST00000527333 ABCC9O60706 1549 aa17.62■□□□□ 0.41
CKAP5-208ENST00000527333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
CKAP5-208ENST00000527333 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
CKAP5-208ENST00000527333 C1QBPQ07021 282 aaKnown RBP17.58■□□□□ 0.4
CKAP5-208ENST00000527333 ZCCHC6Q5VYS8 1495 aaKnown RBP17.53■□□□□ 0.4
CKAP5-208ENST00000527333 SAMD1Q6SPF0 538 aaPredicted RBP17.48■□□□□ 0.39
CKAP5-208ENST00000527333 APLP2Q06481 763 aa17.44■□□□□ 0.38
CKAP5-208ENST00000527333 DCAF1Q9Y4B6 1507 aa17.39■□□□□ 0.37
CKAP5-208ENST00000527333 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
CKAP5-208ENST00000527333 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
CKAP5-208ENST00000527333 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
CKAP5-208ENST00000527333 NACADO15069 1562 aa17.26■□□□□ 0.35
CKAP5-208ENST00000527333 CAPN15O75808 1086 aa17.22■□□□□ 0.35
CKAP5-208ENST00000527333 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
CKAP5-208ENST00000527333 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
CKAP5-208ENST00000527333 RB1CC1Q8TDY2 1594 aa17.18■□□□□ 0.34
CKAP5-208ENST00000527333 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
CKAP5-208ENST00000527333 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
CKAP5-208ENST00000527333 ATF5Q9Y2D1 282 aaPredicted RBP17.07■□□□□ 0.32
CKAP5-208ENST00000527333 DSG3P32926 999 aa16.86■□□□□ 0.29
CKAP5-208ENST00000527333 ABCB7O75027 752 aa16.84■□□□□ 0.29
CKAP5-208ENST00000527333 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
CKAP5-208ENST00000527333 POLA2Q14181 598 aa16.82■□□□□ 0.28
CKAP5-208ENST00000527333 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
CKAP5-208ENST00000527333 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
CKAP5-208ENST00000527333 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
CKAP5-208ENST00000527333 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
CKAP5-208ENST00000527333 FBLN2P98095 1184 aa16.53■□□□□ 0.24
CKAP5-208ENST00000527333 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
CKAP5-208ENST00000527333 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
CKAP5-208ENST00000527333 CECR2Q9BXF3 1484 aa16.23■□□□□ 0.19
CKAP5-208ENST00000527333 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.18
CKAP5-208ENST00000527333 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
CKAP5-208ENST00000527333 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
CKAP5-208ENST00000527333 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
CKAP5-208ENST00000527333 EIF4G1Q04637 1599 aaKnown RBP16.16■□□□□ 0.18
CKAP5-208ENST00000527333 MROH2BQ7Z745 1585 aa16.12■□□□□ 0.17
CKAP5-208ENST00000527333 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
CKAP5-208ENST00000527333 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
CKAP5-208ENST00000527333 SPDYE2Q495Y8 402 aa16.1■□□□□ 0.17
CKAP5-208ENST00000527333 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.16
CKAP5-208ENST00000527333 ZNF692Q9BU19 519 aaPredicted RBP16.06■□□□□ 0.16
CKAP5-208ENST00000527333 SPDYE4A6NLX3 237 aa16.05■□□□□ 0.16
CKAP5-208ENST00000527333 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
CKAP5-208ENST00000527333 FKBP8Q14318 412 aa16.03■□□□□ 0.16
CKAP5-208ENST00000527333 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.16
CKAP5-208ENST00000527333 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
CKAP5-208ENST00000527333 SMARCA2P51531 1590 aa15.98■□□□□ 0.15
CKAP5-208ENST00000527333 WIZO95785 1651 aa15.97■□□□□ 0.15
CKAP5-208ENST00000527333 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
CKAP5-208ENST00000527333 AKT1S1Q96B36 256 aa15.92■□□□□ 0.14
CKAP5-208ENST00000527333 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
CKAP5-208ENST00000527333 SSUH2Q9Y2M2 353 aa15.9■□□□□ 0.14
CKAP5-208ENST00000527333 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
CKAP5-208ENST00000527333 BAZ1BQ9UIG0 1483 aaKnown RBP15.84■□□□□ 0.13
CKAP5-208ENST00000527333 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
CKAP5-208ENST00000527333 REM2Q8IYK8 340 aaPredicted RBP15.74■□□□□ 0.11
CKAP5-208ENST00000527333 PROM2Q8N271 834 aa15.67■□□□□ 0.1
CKAP5-208ENST00000527333 SPDYE1Q8NFV5 336 aaPredicted RBP15.66■□□□□ 0.1
CKAP5-208ENST00000527333 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
CKAP5-208ENST00000527333 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
CKAP5-208ENST00000527333 CLEC11AQ9Y240 323 aa15.6■□□□□ 0.09
CKAP5-208ENST00000527333 FBXO3Q9UK99 471 aa15.55■□□□□ 0.08
CKAP5-208ENST00000527333 PITPNM1O00562 1244 aa15.53■□□□□ 0.08
CKAP5-208ENST00000527333 PRR29P0C7W0 189 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms