RNA–Protein interactions for RNA: ENST00000522907.5

MSRA-208, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 5

Gene MSRA, Length 871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-208ENST00000522907 AEBP2Q6ZN18 517 aaPredicted RBP20.8■□□□□ 0.92
MSRA-208ENST00000522907 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
MSRA-208ENST00000522907 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
MSRA-208ENST00000522907 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
MSRA-208ENST00000522907 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
MSRA-208ENST00000522907 FOXD1Q16676 465 aa16.74■□□□□ 0.27
MSRA-208ENST00000522907 MSH5O43196 834 aa15.85■□□□□ 0.13
MSRA-208ENST00000522907 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
MSRA-208ENST00000522907 PLPPR3Q6T4P5 718 aa15.05■□□□□ -0
MSRA-208ENST00000522907 PPP6R1Q9UPN7 881 aa14.96□□□□□ -0.01
MSRA-208ENST00000522907 ADRA2BP18089 450 aa14.75□□□□□ -0.05
MSRA-208ENST00000522907 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
MSRA-208ENST00000522907 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
MSRA-208ENST00000522907 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
MSRA-208ENST00000522907 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
MSRA-208ENST00000522907 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
MSRA-208ENST00000522907 POTEHQ6S545 545 aa13.39□□□□□ -0.27
MSRA-208ENST00000522907 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
MSRA-208ENST00000522907 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
MSRA-208ENST00000522907 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
MSRA-208ENST00000522907 NISCHQ9Y2I1 1504 aa13.18□□□□□ -0.3
MSRA-208ENST00000522907 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
MSRA-208ENST00000522907 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
MSRA-208ENST00000522907 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
MSRA-208ENST00000522907 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
MSRA-208ENST00000522907 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
MSRA-208ENST00000522907 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
MSRA-208ENST00000522907 DSG3P32926 999 aa12.38□□□□□ -0.43
MSRA-208ENST00000522907 KCNA4P22459 653 aa12.31□□□□□ -0.44
MSRA-208ENST00000522907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.25□□□□□ -0.45
MSRA-208ENST00000522907 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
MSRA-208ENST00000522907 SP7Q8TDD2 431 aaPredicted RBP12.04□□□□□ -0.48
MSRA-208ENST00000522907 CAPN15O75808 1086 aa12.03□□□□□ -0.48
MSRA-208ENST00000522907 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
MSRA-208ENST00000522907 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
MSRA-208ENST00000522907 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
MSRA-208ENST00000522907 ABCB7O75027 752 aa11.74□□□□□ -0.53
MSRA-208ENST00000522907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
MSRA-208ENST00000522907 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
MSRA-208ENST00000522907 APLP2Q06481 763 aa11.69□□□□□ -0.54
MSRA-208ENST00000522907 CCDC180Q9P1Z9 1646 aa11.68□□□□□ -0.54
MSRA-208ENST00000522907 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
MSRA-208ENST00000522907 TRHP20396 242 aaPredicted RBP11.62□□□□□ -0.55
MSRA-208ENST00000522907 SLC4A1APQ9BWU0 796 aaKnown RBP11.62□□□□□ -0.55
MSRA-208ENST00000522907 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
MSRA-208ENST00000522907 ZNF219Q9P2Y4 722 aaPredicted RBP11.61□□□□□ -0.55
MSRA-208ENST00000522907 MYCNP04198 464 aaPredicted RBP11.57□□□□□ -0.56
MSRA-208ENST00000522907 FOXD4L1Q9NU39 408 aa11.48□□□□□ -0.57
MSRA-208ENST00000522907 EVX2Q03828 476 aa11.47□□□□□ -0.57
MSRA-208ENST00000522907 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
MSRA-208ENST00000522907 HAX1O00165 279 aa11.42□□□□□ -0.58
MSRA-208ENST00000522907 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
MSRA-208ENST00000522907 ZBTB22O15209 634 aa11.32□□□□□ -0.6
MSRA-208ENST00000522907 POLA2Q14181 598 aa11.32□□□□□ -0.6
MSRA-208ENST00000522907 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
MSRA-208ENST00000522907 LHX8Q68G74 356 aa11.28□□□□□ -0.6
MSRA-208ENST00000522907 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
MSRA-208ENST00000522907 ABCC9O60706 1549 aa11.24□□□□□ -0.61
MSRA-208ENST00000522907 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
MSRA-208ENST00000522907 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
MSRA-208ENST00000522907 ATXN8OSP0DMR3 200 aa11.15□□□□□ -0.62
MSRA-208ENST00000522907 ZBTB12Q9Y330 459 aaPredicted RBP11.11□□□□□ -0.63
MSRA-208ENST00000522907 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
MSRA-208ENST00000522907 ZCCHC6Q5VYS8 1495 aaKnown RBP11.02□□□□□ -0.65
MSRA-208ENST00000522907 GABBR2O75899 941 aa11□□□□□ -0.65
MSRA-208ENST00000522907 EHMT2Q96KQ7 1210 aa10.99□□□□□ -0.65
MSRA-208ENST00000522907 MYO15BQ96JP2 1530 aa10.94□□□□□ -0.66
MSRA-208ENST00000522907 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
MSRA-208ENST00000522907 DCAF1Q9Y4B6 1507 aa10.94□□□□□ -0.66
MSRA-208ENST00000522907 NACADO15069 1562 aa10.92□□□□□ -0.66
MSRA-208ENST00000522907 CSRNP3Q8WYN3 585 aa10.92□□□□□ -0.66
MSRA-208ENST00000522907 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
MSRA-208ENST00000522907 POTEIP0CG38 1075 aa10.9□□□□□ -0.66
MSRA-208ENST00000522907 RB1CC1Q8TDY2 1594 aa10.88□□□□□ -0.67
MSRA-208ENST00000522907 FBLN2P98095 1184 aa10.85□□□□□ -0.67
MSRA-208ENST00000522907 MKRN4PQ13434 485 aaPredicted RBP10.79□□□□□ -0.68
MSRA-208ENST00000522907 SPDYE2BA6NHP3 402 aa10.78□□□□□ -0.68
MSRA-208ENST00000522907 SPDYE6P0CI01 402 aa10.78□□□□□ -0.68
MSRA-208ENST00000522907 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
MSRA-208ENST00000522907 DCAF8L2P0C7V8 631 aa10.75□□□□□ -0.69
MSRA-208ENST00000522907 UNC13AQ9UPW8 1703 aa10.74□□□□□ -0.69
MSRA-208ENST00000522907 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
MSRA-208ENST00000522907 POTEMA6NI47 508 aa10.66□□□□□ -0.7
MSRA-208ENST00000522907 SSUH2Q9Y2M2 353 aa10.65□□□□□ -0.7
MSRA-208ENST00000522907 BICRAQ9NZM4 1560 aa10.65□□□□□ -0.71
MSRA-208ENST00000522907 ZNF692Q9BU19 519 aaPredicted RBP10.64□□□□□ -0.71
MSRA-208ENST00000522907 SCRIBQ14160 1630 aa10.62□□□□□ -0.71
MSRA-208ENST00000522907 OTUD5Q96G74 571 aa10.61□□□□□ -0.71
MSRA-208ENST00000522907 POTEGQ6S5H5 508 aa10.6□□□□□ -0.71
MSRA-208ENST00000522907 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
MSRA-208ENST00000522907 POTEB2H3BUK9 544 aa10.52□□□□□ -0.73
MSRA-208ENST00000522907 CLEC11AQ9Y240 323 aa10.52□□□□□ -0.73
MSRA-208ENST00000522907 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
MSRA-208ENST00000522907 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
MSRA-208ENST00000522907 PCDH10Q9P2E7 1040 aa10.47□□□□□ -0.73
MSRA-208ENST00000522907 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
MSRA-208ENST00000522907 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
MSRA-208ENST00000522907 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
MSRA-208ENST00000522907 DCBLD2Q96PD2 775 aa10.31□□□□□ -0.76
MSRA-208ENST00000522907 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms