RNA–Protein interactions for RNA: ENST00000520668.1

CDH12-205, Transcript of cadherin 12, humanhuman

TSL 4

Gene CDH12, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-205ENST00000520668 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
CDH12-205ENST00000520668 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
CDH12-205ENST00000520668 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
CDH12-205ENST00000520668 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
CDH12-205ENST00000520668 PLPPR3Q6T4P5 718 aa19.27■□□□□ 0.68
CDH12-205ENST00000520668 FOXD1Q16676 465 aa19.11■□□□□ 0.65
CDH12-205ENST00000520668 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
CDH12-205ENST00000520668 ADRA2BP18089 450 aa18.42■□□□□ 0.54
CDH12-205ENST00000520668 PIAS4Q8N2W9 510 aaPredicted RBP18■□□□□ 0.47
CDH12-205ENST00000520668 MSH5O43196 834 aa17.55■□□□□ 0.4
CDH12-205ENST00000520668 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
CDH12-205ENST00000520668 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
CDH12-205ENST00000520668 MAPK8IP2Q13387 824 aaPredicted RBP16.72■□□□□ 0.27
CDH12-205ENST00000520668 KCNA4P22459 653 aa16.68■□□□□ 0.26
CDH12-205ENST00000520668 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
CDH12-205ENST00000520668 CNKSR2Q8WXI2 1034 aa16.5■□□□□ 0.23
CDH12-205ENST00000520668 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
CDH12-205ENST00000520668 NISCHQ9Y2I1 1504 aa16.35■□□□□ 0.21
CDH12-205ENST00000520668 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
CDH12-205ENST00000520668 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
CDH12-205ENST00000520668 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
CDH12-205ENST00000520668 POTEDQ86YR6 584 aa15.96■□□□□ 0.15
CDH12-205ENST00000520668 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
CDH12-205ENST00000520668 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
CDH12-205ENST00000520668 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
CDH12-205ENST00000520668 EHMT2Q96KQ7 1210 aa15.48■□□□□ 0.07
CDH12-205ENST00000520668 SLC4A2P04920 1241 aa15.44■□□□□ 0.06
CDH12-205ENST00000520668 ZBTB22O15209 634 aa15.37■□□□□ 0.05
CDH12-205ENST00000520668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.04
CDH12-205ENST00000520668 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
CDH12-205ENST00000520668 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
CDH12-205ENST00000520668 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
CDH12-205ENST00000520668 RNF39Q9H2S5 420 aa15.07■□□□□ 0
CDH12-205ENST00000520668 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
CDH12-205ENST00000520668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.87□□□□□ -0.03
CDH12-205ENST00000520668 C1QBPQ07021 282 aaKnown RBP14.87□□□□□ -0.03
CDH12-205ENST00000520668 HNRNPUL2Q1KMD3 747 aaKnown RBP14.87□□□□□ -0.03
CDH12-205ENST00000520668 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
CDH12-205ENST00000520668 ATXN8OSP0DMR3 200 aa14.74□□□□□ -0.05
CDH12-205ENST00000520668 ATF5Q9Y2D1 282 aaPredicted RBP14.73□□□□□ -0.05
CDH12-205ENST00000520668 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
CDH12-205ENST00000520668 APLP2Q06481 763 aa14.68□□□□□ -0.06
CDH12-205ENST00000520668 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
CDH12-205ENST00000520668 CAPN15O75808 1086 aa14.6□□□□□ -0.07
CDH12-205ENST00000520668 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
CDH12-205ENST00000520668 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
CDH12-205ENST00000520668 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.09
CDH12-205ENST00000520668 DSG3P32926 999 aa14.37□□□□□ -0.11
CDH12-205ENST00000520668 ABCB7O75027 752 aa14.35□□□□□ -0.11
CDH12-205ENST00000520668 POLA2Q14181 598 aa14.34□□□□□ -0.11
CDH12-205ENST00000520668 ABCC9O60706 1549 aa14.24□□□□□ -0.13
CDH12-205ENST00000520668 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
CDH12-205ENST00000520668 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
CDH12-205ENST00000520668 FBLN2P98095 1184 aa14.02□□□□□ -0.17
CDH12-205ENST00000520668 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
CDH12-205ENST00000520668 FKBP8Q14318 412 aa13.81□□□□□ -0.2
CDH12-205ENST00000520668 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
CDH12-205ENST00000520668 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
CDH12-205ENST00000520668 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
CDH12-205ENST00000520668 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
CDH12-205ENST00000520668 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
CDH12-205ENST00000520668 RB1CC1Q8TDY2 1594 aa13.65□□□□□ -0.22
CDH12-205ENST00000520668 ZCCHC6Q5VYS8 1495 aaKnown RBP13.63□□□□□ -0.23
CDH12-205ENST00000520668 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
CDH12-205ENST00000520668 NACADO15069 1562 aa13.62□□□□□ -0.23
CDH12-205ENST00000520668 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
CDH12-205ENST00000520668 UNC13AQ9UPW8 1703 aa13.56□□□□□ -0.24
CDH12-205ENST00000520668 DCAF8L2P0C7V8 631 aa13.54□□□□□ -0.24
CDH12-205ENST00000520668 PROM2Q8N271 834 aa13.53□□□□□ -0.24
CDH12-205ENST00000520668 MYO15BQ96JP2 1530 aa13.52□□□□□ -0.25
CDH12-205ENST00000520668 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
CDH12-205ENST00000520668 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDH12-205ENST00000520668 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
CDH12-205ENST00000520668 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
CDH12-205ENST00000520668 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
CDH12-205ENST00000520668 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
CDH12-205ENST00000520668 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
CDH12-205ENST00000520668 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
CDH12-205ENST00000520668 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
CDH12-205ENST00000520668 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
CDH12-205ENST00000520668 STAG3Q9UJ98 1225 aa13.23□□□□□ -0.29
CDH12-205ENST00000520668 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
CDH12-205ENST00000520668 VASPP50552 380 aaPredicted RBP13.11□□□□□ -0.31
CDH12-205ENST00000520668 CHRDL2Q6WN34 429 aa13.08□□□□□ -0.32
CDH12-205ENST00000520668 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
CDH12-205ENST00000520668 MIER1Q8N108 512 aa13.02□□□□□ -0.33
CDH12-205ENST00000520668 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
CDH12-205ENST00000520668 FXR2P51116 673 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDH12-205ENST00000520668 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
CDH12-205ENST00000520668 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
CDH12-205ENST00000520668 PIP4P2Q8N4L2 257 aa12.95□□□□□ -0.34
CDH12-205ENST00000520668 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
CDH12-205ENST00000520668 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
CDH12-205ENST00000520668 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
CDH12-205ENST00000520668 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
CDH12-205ENST00000520668 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
CDH12-205ENST00000520668 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
CDH12-205ENST00000520668 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
CDH12-205ENST00000520668 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
CDH12-205ENST00000520668 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms