RNA–Protein interactions for RNA: ENST00000513289.5

CDH9-205, Transcript of cadherin 9, humanhuman

TSL 3

Gene CDH9, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-205ENST00000513289 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
CDH9-205ENST00000513289 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
CDH9-205ENST00000513289 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
CDH9-205ENST00000513289 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
CDH9-205ENST00000513289 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
CDH9-205ENST00000513289 FOXD1Q16676 465 aa17.02■□□□□ 0.32
CDH9-205ENST00000513289 MSH5O43196 834 aa16.51■□□□□ 0.23
CDH9-205ENST00000513289 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
CDH9-205ENST00000513289 PIAS4Q8N2W9 510 aaPredicted RBP15.56■□□□□ 0.08
CDH9-205ENST00000513289 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
CDH9-205ENST00000513289 ADRA2BP18089 450 aa15.4■□□□□ 0.06
CDH9-205ENST00000513289 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
CDH9-205ENST00000513289 KCNA4P22459 653 aa14.56□□□□□ -0.08
CDH9-205ENST00000513289 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
CDH9-205ENST00000513289 POTEHQ6S545 545 aa14.23□□□□□ -0.13
CDH9-205ENST00000513289 PPP4R3CPQ6ZMV5 832 aa14.18□□□□□ -0.14
CDH9-205ENST00000513289 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
CDH9-205ENST00000513289 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
CDH9-205ENST00000513289 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
CDH9-205ENST00000513289 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
CDH9-205ENST00000513289 SLC4A1APQ9BWU0 796 aaKnown RBP13.92□□□□□ -0.18
CDH9-205ENST00000513289 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
CDH9-205ENST00000513289 NPM3O75607 178 aaKnown RBP13.81□□□□□ -0.2
CDH9-205ENST00000513289 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
CDH9-205ENST00000513289 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
CDH9-205ENST00000513289 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
CDH9-205ENST00000513289 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
CDH9-205ENST00000513289 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
CDH9-205ENST00000513289 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
CDH9-205ENST00000513289 ZBTB22O15209 634 aa13.46□□□□□ -0.25
CDH9-205ENST00000513289 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
CDH9-205ENST00000513289 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
CDH9-205ENST00000513289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDH9-205ENST00000513289 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
CDH9-205ENST00000513289 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
CDH9-205ENST00000513289 SP7Q8TDD2 431 aaPredicted RBP12.67□□□□□ -0.38
CDH9-205ENST00000513289 U3KPZ7 1027 aaPredicted RBP12.66□□□□□ -0.38
CDH9-205ENST00000513289 ATXN8OSP0DMR3 200 aa12.62□□□□□ -0.39
CDH9-205ENST00000513289 DSG3P32926 999 aa12.57□□□□□ -0.4
CDH9-205ENST00000513289 CAPN15O75808 1086 aa12.49□□□□□ -0.41
CDH9-205ENST00000513289 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
CDH9-205ENST00000513289 FKBP8Q14318 412 aa12.42□□□□□ -0.42
CDH9-205ENST00000513289 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
CDH9-205ENST00000513289 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
CDH9-205ENST00000513289 APLP2Q06481 763 aa12.35□□□□□ -0.43
CDH9-205ENST00000513289 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
CDH9-205ENST00000513289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
CDH9-205ENST00000513289 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
CDH9-205ENST00000513289 PLSCR2Q9NRY7 297 aa12.29□□□□□ -0.44
CDH9-205ENST00000513289 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
CDH9-205ENST00000513289 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
CDH9-205ENST00000513289 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
CDH9-205ENST00000513289 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
CDH9-205ENST00000513289 NISCHQ9Y2I1 1504 aa12.2□□□□□ -0.46
CDH9-205ENST00000513289 ABCB7O75027 752 aa12.18□□□□□ -0.46
CDH9-205ENST00000513289 SLC24A1O60721 1099 aa12.05□□□□□ -0.48
CDH9-205ENST00000513289 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
CDH9-205ENST00000513289 POLA2Q14181 598 aa11.91□□□□□ -0.5
CDH9-205ENST00000513289 HAX1O00165 279 aa11.89□□□□□ -0.51
CDH9-205ENST00000513289 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
CDH9-205ENST00000513289 LHX8Q68G74 356 aa11.86□□□□□ -0.51
CDH9-205ENST00000513289 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
CDH9-205ENST00000513289 PROM2Q8N271 834 aa11.75□□□□□ -0.53
CDH9-205ENST00000513289 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
CDH9-205ENST00000513289 FBLN2P98095 1184 aa11.72□□□□□ -0.53
CDH9-205ENST00000513289 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
CDH9-205ENST00000513289 ZBTB12Q9Y330 459 aaPredicted RBP11.71□□□□□ -0.53
CDH9-205ENST00000513289 VASPP50552 380 aaPredicted RBP11.64□□□□□ -0.55
CDH9-205ENST00000513289 EVX2Q03828 476 aa11.63□□□□□ -0.55
CDH9-205ENST00000513289 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
CDH9-205ENST00000513289 IFNLR1Q8IU57 520 aaPredicted RBP11.54□□□□□ -0.56
CDH9-205ENST00000513289 OSCARQ8IYS5 282 aa11.54□□□□□ -0.56
CDH9-205ENST00000513289 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
CDH9-205ENST00000513289 FXR2P51116 673 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDH9-205ENST00000513289 PKD2Q13563 968 aa11.38□□□□□ -0.59
CDH9-205ENST00000513289 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
CDH9-205ENST00000513289 PLCB2Q00722 1185 aa11.36□□□□□ -0.59
CDH9-205ENST00000513289 DCAF8L2P0C7V8 631 aa11.33□□□□□ -0.6
CDH9-205ENST00000513289 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
CDH9-205ENST00000513289 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
CDH9-205ENST00000513289 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
CDH9-205ENST00000513289 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
CDH9-205ENST00000513289 GABBR2O75899 941 aa11.3□□□□□ -0.6
CDH9-205ENST00000513289 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
CDH9-205ENST00000513289 POTEMA6NI47 508 aa11.24□□□□□ -0.61
CDH9-205ENST00000513289 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
CDH9-205ENST00000513289 SPOCK2Q92563 424 aa11.24□□□□□ -0.61
CDH9-205ENST00000513289 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDH9-205ENST00000513289 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
CDH9-205ENST00000513289 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
CDH9-205ENST00000513289 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
CDH9-205ENST00000513289 PCDH10Q9P2E7 1040 aa11.18□□□□□ -0.62
CDH9-205ENST00000513289 ECM2O94769 699 aaPredicted RBP11.17□□□□□ -0.62
CDH9-205ENST00000513289 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
CDH9-205ENST00000513289 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
CDH9-205ENST00000513289 C19orf67A6NJJ6 358 aa11.13□□□□□ -0.63
CDH9-205ENST00000513289 MIER1Q8N108 512 aa11.12□□□□□ -0.63
CDH9-205ENST00000513289 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDH9-205ENST00000513289 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
CDH9-205ENST00000513289 RGL2O15211 777 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms