RNA–Protein interactions for RNA: ENST00000512191.1

CAST-237, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-237ENST00000512191 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
CAST-237ENST00000512191 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
CAST-237ENST00000512191 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
CAST-237ENST00000512191 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
CAST-237ENST00000512191 FOXD1Q16676 465 aa15.96■□□□□ 0.15
CAST-237ENST00000512191 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
CAST-237ENST00000512191 MSH5O43196 834 aa15.01□□□□□ -0.01
CAST-237ENST00000512191 PIAS4Q8N2W9 510 aaPredicted RBP15□□□□□ -0.01
CAST-237ENST00000512191 ADRA2BP18089 450 aa14.95□□□□□ -0.02
CAST-237ENST00000512191 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
CAST-237ENST00000512191 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
CAST-237ENST00000512191 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
CAST-237ENST00000512191 MAPK8IP2Q13387 824 aaPredicted RBP13.66□□□□□ -0.22
CAST-237ENST00000512191 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
CAST-237ENST00000512191 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
CAST-237ENST00000512191 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
CAST-237ENST00000512191 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.29
CAST-237ENST00000512191 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
CAST-237ENST00000512191 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
CAST-237ENST00000512191 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
CAST-237ENST00000512191 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
CAST-237ENST00000512191 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
CAST-237ENST00000512191 CACNB1Q02641 598 aaPredicted RBP12.76□□□□□ -0.37
CAST-237ENST00000512191 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
CAST-237ENST00000512191 KCNA4P22459 653 aa12.7□□□□□ -0.38
CAST-237ENST00000512191 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
CAST-237ENST00000512191 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.392e-8■■■□□ 16.2
CAST-237ENST00000512191 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
CAST-237ENST00000512191 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
CAST-237ENST00000512191 APLP2Q06481 763 aa12.17□□□□□ -0.46
CAST-237ENST00000512191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
CAST-237ENST00000512191 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
CAST-237ENST00000512191 CAPN15O75808 1086 aa12.11□□□□□ -0.47
CAST-237ENST00000512191 SLC4A1APQ9BWU0 796 aaKnown RBP12.08□□□□□ -0.48
CAST-237ENST00000512191 SAMD1Q6SPF0 538 aaPredicted RBP12.05□□□□□ -0.48
CAST-237ENST00000512191 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
CAST-237ENST00000512191 ZNF219Q9P2Y4 722 aaPredicted RBP11.99□□□□□ -0.49
CAST-237ENST00000512191 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
CAST-237ENST00000512191 DSG3P32926 999 aa11.97□□□□□ -0.49
CAST-237ENST00000512191 TRHP20396 242 aaPredicted RBP11.92□□□□□ -0.5
CAST-237ENST00000512191 FOXD4L1Q9NU39 408 aa11.9□□□□□ -0.5
CAST-237ENST00000512191 ABCB7O75027 752 aa11.78□□□□□ -0.52
CAST-237ENST00000512191 ZBTB22O15209 634 aa11.63□□□□□ -0.55
CAST-237ENST00000512191 POLA2Q14181 598 aa11.62□□□□□ -0.55
CAST-237ENST00000512191 NISCHQ9Y2I1 1504 aa11.56□□□□□ -0.56
CAST-237ENST00000512191 ATXN8OSP0DMR3 200 aa11.56□□□□□ -0.56
CAST-237ENST00000512191 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
CAST-237ENST00000512191 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
CAST-237ENST00000512191 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
CAST-237ENST00000512191 POTEHQ6S545 545 aa11.29□□□□□ -0.6
CAST-237ENST00000512191 FBLN2P98095 1184 aa11.27□□□□□ -0.61
CAST-237ENST00000512191 AKT1S1Q96B36 256 aa11.25□□□□□ -0.61
CAST-237ENST00000512191 OSCARQ8IYS5 282 aa11.24□□□□□ -0.61
CAST-237ENST00000512191 CSRNP3Q8WYN3 585 aa11.24□□□□□ -0.61
CAST-237ENST00000512191 EHMT2Q96KQ7 1210 aa11.19□□□□□ -0.62
CAST-237ENST00000512191 CHRDL2Q6WN34 429 aa11.15□□□□□ -0.62
CAST-237ENST00000512191 SPDYE2BA6NHP3 402 aa11.13□□□□□ -0.63
CAST-237ENST00000512191 SPDYE6P0CI01 402 aa11.13□□□□□ -0.63
CAST-237ENST00000512191 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
CAST-237ENST00000512191 REM2Q8IYK8 340 aaPredicted RBP11.09□□□□□ -0.63
CAST-237ENST00000512191 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
CAST-237ENST00000512191 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
CAST-237ENST00000512191 PITPNM1O00562 1244 aa10.96□□□□□ -0.65
CAST-237ENST00000512191 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
CAST-237ENST00000512191 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
CAST-237ENST00000512191 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
CAST-237ENST00000512191 FXR2P51116 673 aaKnown RBP eCLIP10.85□□□□□ -0.675e-6■□□□□ 8.9
CAST-237ENST00000512191 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
CAST-237ENST00000512191 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
CAST-237ENST00000512191 PRR29P0C7W0 189 aa10.7□□□□□ -0.7
CAST-237ENST00000512191 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
CAST-237ENST00000512191 HAX1O00165 279 aa10.69□□□□□ -0.7
CAST-237ENST00000512191 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
CAST-237ENST00000512191 SP7Q8TDD2 431 aaPredicted RBP10.66□□□□□ -0.7
CAST-237ENST00000512191 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
CAST-237ENST00000512191 CHADLQ6NUI6 762 aa10.55□□□□□ -0.72
CAST-237ENST00000512191 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
CAST-237ENST00000512191 FARP1Q9Y4F1 1045 aaPredicted RBP10.46□□□□□ -0.73
CAST-237ENST00000512191 ABCC9O60706 1549 aa10.46□□□□□ -0.74
CAST-237ENST00000512191 CCDC180Q9P1Z9 1646 aa10.44□□□□□ -0.74
CAST-237ENST00000512191 EVX2Q03828 476 aa10.43□□□□□ -0.74
CAST-237ENST00000512191 PROM2Q8N271 834 aa10.41□□□□□ -0.74
CAST-237ENST00000512191 CREBZFQ9NS37 354 aa10.4□□□□□ -0.74
CAST-237ENST00000512191 CD44P16070 742 aaKnown RBP10.38□□□□□ -0.75
CAST-237ENST00000512191 NPM1P06748 294 aaKnown RBP eCLIP10.33□□□□□ -0.76
CAST-237ENST00000512191 CLCN6P51797 869 aa10.33□□□□□ -0.76
CAST-237ENST00000512191 GABBR2O75899 941 aa10.3□□□□□ -0.76
CAST-237ENST00000512191 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
CAST-237ENST00000512191 PLEKHG5O94827 1062 aa10.27□□□□□ -0.77
CAST-237ENST00000512191 ZRANB1Q9UGI0 708 aa10.25□□□□□ -0.77
CAST-237ENST00000512191 FKBP8Q14318 412 aa10.24□□□□□ -0.77
CAST-237ENST00000512191 ZNF579Q8NAF0 562 aaKnown RBP10.24□□□□□ -0.77
CAST-237ENST00000512191 MNX1P50219 401 aaPredicted RBP10.21□□□□□ -0.77
CAST-237ENST00000512191 MIER1Q8N108 512 aa10.17□□□□□ -0.78
CAST-237ENST00000512191 PLCD3Q8N3E9 789 aa10.14□□□□□ -0.79
CAST-237ENST00000512191 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
CAST-237ENST00000512191 DCBLD2Q96PD2 775 aa10.12□□□□□ -0.79
CAST-237ENST00000512191 FBXO3Q9UK99 471 aa10.1□□□□□ -0.79
CAST-237ENST00000512191 PHF12Q96QT6 1004 aa10.07□□□□□ -0.8
CAST-237ENST00000512191 TSPYL2Q9H2G4 693 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms