RNA–Protein interactions for RNA: ENST00000510823.1

NEK11-211, Transcript of NIMA related kinase 11, humanhuman

TSL 4

Gene NEK11, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-211ENST00000510823 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
NEK11-211ENST00000510823 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
NEK11-211ENST00000510823 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
NEK11-211ENST00000510823 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
NEK11-211ENST00000510823 POTEDQ86YR6 584 aa16.88■□□□□ 0.29
NEK11-211ENST00000510823 FOXD1Q16676 465 aa16.72■□□□□ 0.27
NEK11-211ENST00000510823 MSH5O43196 834 aa15.95■□□□□ 0.14
NEK11-211ENST00000510823 PIAS4Q8N2W9 510 aaPredicted RBP15.45■□□□□ 0.06
NEK11-211ENST00000510823 PPP6R1Q9UPN7 881 aa15.03■□□□□ -0
NEK11-211ENST00000510823 ADRA2BP18089 450 aa14.95□□□□□ -0.02
NEK11-211ENST00000510823 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
NEK11-211ENST00000510823 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
NEK11-211ENST00000510823 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
NEK11-211ENST00000510823 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
NEK11-211ENST00000510823 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
NEK11-211ENST00000510823 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
NEK11-211ENST00000510823 RNF39Q9H2S5 420 aa13.52□□□□□ -0.25
NEK11-211ENST00000510823 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
NEK11-211ENST00000510823 HOXD11P31277 338 aaPredicted RBP13.19□□□□□ -0.3
NEK11-211ENST00000510823 POTEHQ6S545 545 aa13.08□□□□□ -0.32
NEK11-211ENST00000510823 NISCHQ9Y2I1 1504 aa12.97□□□□□ -0.33
NEK11-211ENST00000510823 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
NEK11-211ENST00000510823 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
NEK11-211ENST00000510823 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
NEK11-211ENST00000510823 CNKSR2Q8WXI2 1034 aa12.82□□□□□ -0.36
NEK11-211ENST00000510823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
NEK11-211ENST00000510823 DSG3P32926 999 aa12.41□□□□□ -0.42
NEK11-211ENST00000510823 CAPN15O75808 1086 aa12.34□□□□□ -0.43
NEK11-211ENST00000510823 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
NEK11-211ENST00000510823 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
NEK11-211ENST00000510823 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
NEK11-211ENST00000510823 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
NEK11-211ENST00000510823 ABCB7O75027 752 aa11.98□□□□□ -0.49
NEK11-211ENST00000510823 TRHP20396 242 aaPredicted RBP11.96□□□□□ -0.49
NEK11-211ENST00000510823 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
NEK11-211ENST00000510823 SP7Q8TDD2 431 aaPredicted RBP11.9□□□□□ -0.5
NEK11-211ENST00000510823 RBM42Q9BTD8 480 aaKnown RBP11.87□□□□□ -0.51
NEK11-211ENST00000510823 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
NEK11-211ENST00000510823 APLP2Q06481 763 aa11.82□□□□□ -0.52
NEK11-211ENST00000510823 KCNA4P22459 653 aa11.69□□□□□ -0.54
NEK11-211ENST00000510823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.63□□□□□ -0.55
NEK11-211ENST00000510823 HNRNPUL2Q1KMD3 747 aaKnown RBP11.63□□□□□ -0.55
NEK11-211ENST00000510823 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
NEK11-211ENST00000510823 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
NEK11-211ENST00000510823 HAX1O00165 279 aa11.51□□□□□ -0.57
NEK11-211ENST00000510823 PIP4P2Q8N4L2 257 aa11.47□□□□□ -0.57
NEK11-211ENST00000510823 POLA2Q14181 598 aa11.45□□□□□ -0.58
NEK11-211ENST00000510823 AKT1S1Q96B36 256 aa11.43□□□□□ -0.58
NEK11-211ENST00000510823 REM2Q8IYK8 340 aaPredicted RBP11.33□□□□□ -0.6
NEK11-211ENST00000510823 CCDC180Q9P1Z9 1646 aa11.33□□□□□ -0.6
NEK11-211ENST00000510823 EVX2Q03828 476 aa11.27□□□□□ -0.61
NEK11-211ENST00000510823 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
NEK11-211ENST00000510823 PITPNM1O00562 1244 aa11.22□□□□□ -0.61
NEK11-211ENST00000510823 MYCNP04198 464 aaPredicted RBP11.21□□□□□ -0.61
NEK11-211ENST00000510823 LHX8Q68G74 356 aa11.16□□□□□ -0.62
NEK11-211ENST00000510823 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
NEK11-211ENST00000510823 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
NEK11-211ENST00000510823 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
NEK11-211ENST00000510823 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
NEK11-211ENST00000510823 FOXD4L1Q9NU39 408 aa10.99□□□□□ -0.65
NEK11-211ENST00000510823 GABBR2O75899 941 aa10.98□□□□□ -0.65
NEK11-211ENST00000510823 PRKAR2AP13861 404 aaKnown RBP10.94□□□□□ -0.66
NEK11-211ENST00000510823 C19orf67A6NJJ6 358 aa10.93□□□□□ -0.66
NEK11-211ENST00000510823 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
NEK11-211ENST00000510823 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
NEK11-211ENST00000510823 CLEC11AQ9Y240 323 aa10.8□□□□□ -0.68
NEK11-211ENST00000510823 ABCC9O60706 1549 aa10.79□□□□□ -0.68
NEK11-211ENST00000510823 DCAF1Q9Y4B6 1507 aa10.77□□□□□ -0.69
NEK11-211ENST00000510823 SPDYE1Q8NFV5 336 aaPredicted RBP10.74□□□□□ -0.69
NEK11-211ENST00000510823 POTEIP0CG38 1075 aa10.73□□□□□ -0.69
NEK11-211ENST00000510823 SPDYE2BA6NHP3 402 aa10.72□□□□□ -0.69
NEK11-211ENST00000510823 SPDYE6P0CI01 402 aa10.72□□□□□ -0.69
NEK11-211ENST00000510823 SPDYE2Q495Y8 402 aa10.72□□□□□ -0.69
NEK11-211ENST00000510823 ZBTB22O15209 634 aa10.71□□□□□ -0.69
NEK11-211ENST00000510823 MYO15BQ96JP2 1530 aa10.7□□□□□ -0.7
NEK11-211ENST00000510823 ATXN8OSP0DMR3 200 aa10.7□□□□□ -0.7
NEK11-211ENST00000510823 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
NEK11-211ENST00000510823 DCAF8L2P0C7V8 631 aa10.64□□□□□ -0.71
NEK11-211ENST00000510823 NACADO15069 1562 aa10.61□□□□□ -0.71
NEK11-211ENST00000510823 FBLN2P98095 1184 aa10.58□□□□□ -0.72
NEK11-211ENST00000510823 POTEMA6NI47 508 aa10.55□□□□□ -0.72
NEK11-211ENST00000510823 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
NEK11-211ENST00000510823 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
NEK11-211ENST00000510823 CLCN6P51797 869 aa10.53□□□□□ -0.72
NEK11-211ENST00000510823 RB1CC1Q8TDY2 1594 aa10.51□□□□□ -0.73
NEK11-211ENST00000510823 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
NEK11-211ENST00000510823 PRR29P0C7W0 189 aa10.49□□□□□ -0.73
NEK11-211ENST00000510823 POTEGQ6S5H5 508 aa10.49□□□□□ -0.73
NEK11-211ENST00000510823 OTUD5Q96G74 571 aa10.48□□□□□ -0.73
NEK11-211ENST00000510823 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
NEK11-211ENST00000510823 MKRN4PQ13434 485 aaPredicted RBP10.41□□□□□ -0.74
NEK11-211ENST00000510823 PCDH10Q9P2E7 1040 aa10.41□□□□□ -0.74
NEK11-211ENST00000510823 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
NEK11-211ENST00000510823 SHROOM4Q9ULL8 1493 aa10.4□□□□□ -0.74
NEK11-211ENST00000510823 POTEB2H3BUK9 544 aa10.36□□□□□ -0.75
NEK11-211ENST00000510823 SCRIBQ14160 1630 aa10.36□□□□□ -0.75
NEK11-211ENST00000510823 PABPN1Q86U42 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
NEK11-211ENST00000510823 ZNF579Q8NAF0 562 aaKnown RBP10.31□□□□□ -0.76
NEK11-211ENST00000510823 ZRANB1Q9UGI0 708 aa10.28□□□□□ -0.76
NEK11-211ENST00000510823 GALR2O43603 387 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms