RNA–Protein interactions for RNA: ENST00000509699.6

FBXO38-216, Transcript of F-box protein 38, humanhuman

TSL 3

Gene FBXO38, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-216ENST00000509699 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
FBXO38-216ENST00000509699 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
FBXO38-216ENST00000509699 SENP3Q9H4L4 574 aaPredicted RBP25.92■■□□□ 1.74
FBXO38-216ENST00000509699 PHF23Q9BUL5 403 aaPredicted RBP25.44■■□□□ 1.66
FBXO38-216ENST00000509699 FOXD1Q16676 465 aa24.14■■□□□ 1.45
FBXO38-216ENST00000509699 POTEDQ86YR6 584 aa23.34■■□□□ 1.33
FBXO38-216ENST00000509699 MSH5O43196 834 aa22.94■■□□□ 1.26
FBXO38-216ENST00000509699 PIAS4Q8N2W9 510 aaPredicted RBP22.5■■□□□ 1.19
FBXO38-216ENST00000509699 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
FBXO38-216ENST00000509699 PPP6R1Q9UPN7 881 aa22.04■■□□□ 1.12
FBXO38-216ENST00000509699 ADRA2BP18089 450 aa21.99■■□□□ 1.11
FBXO38-216ENST00000509699 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
FBXO38-216ENST00000509699 MAPK8IP2Q13387 824 aaPredicted RBP20.36■□□□□ 0.85
FBXO38-216ENST00000509699 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
FBXO38-216ENST00000509699 CACNB1Q02641 598 aaPredicted RBP20.08■□□□□ 0.81
FBXO38-216ENST00000509699 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
FBXO38-216ENST00000509699 DCAF8L1A6NGE4 600 aa19.73■□□□□ 0.75
FBXO38-216ENST00000509699 RNF39Q9H2S5 420 aa19.43■□□□□ 0.7
FBXO38-216ENST00000509699 HOXD11P31277 338 aaPredicted RBP19.39■□□□□ 0.69
FBXO38-216ENST00000509699 PPP4R3CPQ6ZMV5 832 aa19.36■□□□□ 0.69
FBXO38-216ENST00000509699 C1QBPQ07021 282 aaKnown RBP19.18■□□□□ 0.66
FBXO38-216ENST00000509699 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
FBXO38-216ENST00000509699 RNF216Q9NWF9 866 aaPredicted RBP19.13■□□□□ 0.65
FBXO38-216ENST00000509699 DNAJC5BQ9UF47 199 aa18.86■□□□□ 0.61
FBXO38-216ENST00000509699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.59■□□□□ 0.571e-6■□□□□ 10.9
FBXO38-216ENST00000509699 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.56
FBXO38-216ENST00000509699 POTEHQ6S545 545 aa18.21■□□□□ 0.51
FBXO38-216ENST00000509699 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
FBXO38-216ENST00000509699 CAPN15O75808 1086 aa18.06■□□□□ 0.48
FBXO38-216ENST00000509699 U3KPZ7 1027 aaPredicted RBP18.02■□□□□ 0.48
FBXO38-216ENST00000509699 DSG3P32926 999 aa17.99■□□□□ 0.47
FBXO38-216ENST00000509699 SPINK5Q9NQ38 1064 aaPredicted RBP17.95■□□□□ 0.46
FBXO38-216ENST00000509699 APLP2Q06481 763 aa17.65■□□□□ 0.42
FBXO38-216ENST00000509699 TRHP20396 242 aaPredicted RBP17.61■□□□□ 0.41
FBXO38-216ENST00000509699 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
FBXO38-216ENST00000509699 ABCB7O75027 752 aa17.54■□□□□ 0.4
FBXO38-216ENST00000509699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
FBXO38-216ENST00000509699 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
FBXO38-216ENST00000509699 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
FBXO38-216ENST00000509699 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
FBXO38-216ENST00000509699 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
FBXO38-216ENST00000509699 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
FBXO38-216ENST00000509699 KCNA4P22459 653 aa17.23■□□□□ 0.35
FBXO38-216ENST00000509699 CHRDL2Q6WN34 429 aa17.1■□□□□ 0.33
FBXO38-216ENST00000509699 POLA2Q14181 598 aa16.96■□□□□ 0.31
FBXO38-216ENST00000509699 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
FBXO38-216ENST00000509699 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
FBXO38-216ENST00000509699 SP7Q8TDD2 431 aaPredicted RBP16.79■□□□□ 0.28
FBXO38-216ENST00000509699 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
FBXO38-216ENST00000509699 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.25
FBXO38-216ENST00000509699 DCAF8L2P0C7V8 631 aa16.59■□□□□ 0.25
FBXO38-216ENST00000509699 DCAF1Q9Y4B6 1507 aa16.58■□□□□ 0.24
FBXO38-216ENST00000509699 REM2Q8IYK8 340 aaPredicted RBP16.53■□□□□ 0.24
FBXO38-216ENST00000509699 PIP4P2Q8N4L2 257 aa16.52■□□□□ 0.24
FBXO38-216ENST00000509699 SHROOM4Q9ULL8 1493 aa16.49■□□□□ 0.23
FBXO38-216ENST00000509699 HAX1O00165 279 aa16.48■□□□□ 0.23
FBXO38-216ENST00000509699 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
FBXO38-216ENST00000509699 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
FBXO38-216ENST00000509699 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
FBXO38-216ENST00000509699 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
FBXO38-216ENST00000509699 FXR2P51116 673 aaKnown RBP eCLIP16.32■□□□□ 0.2
FBXO38-216ENST00000509699 MYO15BQ96JP2 1530 aa16.31■□□□□ 0.2
FBXO38-216ENST00000509699 ABCC9O60706 1549 aa16.24■□□□□ 0.19
FBXO38-216ENST00000509699 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
FBXO38-216ENST00000509699 NACADO15069 1562 aa16.15■□□□□ 0.18
FBXO38-216ENST00000509699 EVX2Q03828 476 aa16.07■□□□□ 0.16
FBXO38-216ENST00000509699 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
FBXO38-216ENST00000509699 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
FBXO38-216ENST00000509699 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
FBXO38-216ENST00000509699 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
FBXO38-216ENST00000509699 FBLN2P98095 1184 aa15.99■□□□□ 0.15
FBXO38-216ENST00000509699 PRKAR2AP13861 404 aaKnown RBP15.98■□□□□ 0.15
FBXO38-216ENST00000509699 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
FBXO38-216ENST00000509699 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.14
FBXO38-216ENST00000509699 CLEC11AQ9Y240 323 aa15.95■□□□□ 0.14
FBXO38-216ENST00000509699 SPDYE1Q8NFV5 336 aaPredicted RBP15.93■□□□□ 0.14
FBXO38-216ENST00000509699 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
FBXO38-216ENST00000509699 C19orf67A6NJJ6 358 aa15.82■□□□□ 0.12
FBXO38-216ENST00000509699 ZBTB22O15209 634 aa15.76■□□□□ 0.11
FBXO38-216ENST00000509699 GABBR2O75899 941 aa15.76■□□□□ 0.11
FBXO38-216ENST00000509699 LHX8Q68G74 356 aa15.75■□□□□ 0.11
FBXO38-216ENST00000509699 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
FBXO38-216ENST00000509699 SSUH2Q9Y2M2 353 aa15.67■□□□□ 0.1
FBXO38-216ENST00000509699 RSF1Q96T23 1441 aaPredicted RBP15.63■□□□□ 0.09
FBXO38-216ENST00000509699 CHADLQ6NUI6 762 aa15.63■□□□□ 0.09
FBXO38-216ENST00000509699 MKRN4PQ13434 485 aaPredicted RBP15.61■□□□□ 0.09
FBXO38-216ENST00000509699 PRR29P0C7W0 189 aa15.59■□□□□ 0.09
FBXO38-216ENST00000509699 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
FBXO38-216ENST00000509699 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
FBXO38-216ENST00000509699 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
FBXO38-216ENST00000509699 MROH2BQ7Z745 1585 aa15.47■□□□□ 0.07
FBXO38-216ENST00000509699 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
FBXO38-216ENST00000509699 CD44P16070 742 aaKnown RBP15.44■□□□□ 0.06
FBXO38-216ENST00000509699 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
FBXO38-216ENST00000509699 CLCN6P51797 869 aa15.39■□□□□ 0.05
FBXO38-216ENST00000509699 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
FBXO38-216ENST00000509699 POTEIP0CG38 1075 aa15.34■□□□□ 0.05
FBXO38-216ENST00000509699 WIZO95785 1651 aa15.34■□□□□ 0.05
FBXO38-216ENST00000509699 SMARCA4P51532 1647 aa15.33■□□□□ 0.04
FBXO38-216ENST00000509699 PLSCR2Q9NRY7 297 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms