RNA–Protein interactions for RNA: ENST00000509562.2

ZFYVE16-205, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 3

Gene ZFYVE16, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-205ENST00000509562 AEBP2Q6ZN18 517 aaPredicted RBP34.34■■■■□ 3.09
ZFYVE16-205ENST00000509562 CHIC1Q5VXU3 224 aa34.01■■■■□ 3.03
ZFYVE16-205ENST00000509562 PHF23Q9BUL5 403 aaPredicted RBP29.95■■■□□ 2.39
ZFYVE16-205ENST00000509562 SENP3Q9H4L4 574 aaPredicted RBP29.11■■■□□ 2.25
ZFYVE16-205ENST00000509562 PLPPR3Q6T4P5 718 aa27.83■■■□□ 2.05
ZFYVE16-205ENST00000509562 FOXD1Q16676 465 aa26.94■■□□□ 1.9
ZFYVE16-205ENST00000509562 PPP6R1Q9UPN7 881 aa26.28■■□□□ 1.8
ZFYVE16-205ENST00000509562 ADRA2BP18089 450 aa26.27■■□□□ 1.8
ZFYVE16-205ENST00000509562 PIAS4Q8N2W9 510 aaPredicted RBP25.49■■□□□ 1.67
ZFYVE16-205ENST00000509562 MSH5O43196 834 aa24.69■■□□□ 1.54
ZFYVE16-205ENST00000509562 PPP4R3CPQ6ZMV5 832 aa24.57■■□□□ 1.52
ZFYVE16-205ENST00000509562 KCNA4P22459 653 aa24.47■■□□□ 1.51
ZFYVE16-205ENST00000509562 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
ZFYVE16-205ENST00000509562 NCBP3Q53F19 620 aaKnown RBP24.08■■□□□ 1.45
ZFYVE16-205ENST00000509562 CNKSR2Q8WXI2 1034 aa23.8■■□□□ 1.4
ZFYVE16-205ENST00000509562 MAPK8IP2Q13387 824 aaPredicted RBP23.7■■□□□ 1.38
ZFYVE16-205ENST00000509562 NPM3O75607 178 aaKnown RBP23.68■■□□□ 1.38
ZFYVE16-205ENST00000509562 SLC4A1APQ9BWU0 796 aaKnown RBP23.4■■□□□ 1.34
ZFYVE16-205ENST00000509562 DMRT2Q9Y5R5 561 aa23.3■■□□□ 1.32
ZFYVE16-205ENST00000509562 RNF216Q9NWF9 866 aaPredicted RBP23.23■■□□□ 1.31
ZFYVE16-205ENST00000509562 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
ZFYVE16-205ENST00000509562 HOXD11P31277 338 aaPredicted RBP23.02■■□□□ 1.28
ZFYVE16-205ENST00000509562 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
ZFYVE16-205ENST00000509562 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
ZFYVE16-205ENST00000509562 ZBTB22O15209 634 aa22.5■■□□□ 1.19
ZFYVE16-205ENST00000509562 FOXD4L1Q9NU39 408 aa22.41■■□□□ 1.18
ZFYVE16-205ENST00000509562 SLC4A2P04920 1241 aa22.26■■□□□ 1.15
ZFYVE16-205ENST00000509562 DCAF8L1A6NGE4 600 aa22.22■■□□□ 1.15
ZFYVE16-205ENST00000509562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.91■■□□□ 1.1
ZFYVE16-205ENST00000509562 MYCNP04198 464 aaPredicted RBP21.89■■□□□ 1.09
ZFYVE16-205ENST00000509562 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
ZFYVE16-205ENST00000509562 POTEDQ86YR6 584 aa21.67■■□□□ 1.06
ZFYVE16-205ENST00000509562 ATXN8OSP0DMR3 200 aa21.64■■□□□ 1.05
ZFYVE16-205ENST00000509562 U3KPZ7 1027 aaPredicted RBP21.59■■□□□ 1.05
ZFYVE16-205ENST00000509562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.53■■□□□ 1.04
ZFYVE16-205ENST00000509562 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
ZFYVE16-205ENST00000509562 SAMD1Q6SPF0 538 aaPredicted RBP21.45■■□□□ 1.02
ZFYVE16-205ENST00000509562 ATF5Q9Y2D1 282 aaPredicted RBP21.24■□□□□ 0.99
ZFYVE16-205ENST00000509562 APLP2Q06481 763 aa21.19■□□□□ 0.98
ZFYVE16-205ENST00000509562 RNF39Q9H2S5 420 aa21.19■□□□□ 0.98
ZFYVE16-205ENST00000509562 C1QBPQ07021 282 aaKnown RBP21■□□□□ 0.95
ZFYVE16-205ENST00000509562 ZNF219Q9P2Y4 722 aaPredicted RBP20.9■□□□□ 0.94
ZFYVE16-205ENST00000509562 SPINK5Q9NQ38 1064 aaPredicted RBP20.84■□□□□ 0.93
ZFYVE16-205ENST00000509562 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
ZFYVE16-205ENST00000509562 CAPN15O75808 1086 aa20.74■□□□□ 0.91
ZFYVE16-205ENST00000509562 POLA2Q14181 598 aa20.55■□□□□ 0.88
ZFYVE16-205ENST00000509562 FKBP8Q14318 412 aa20.54■□□□□ 0.88
ZFYVE16-205ENST00000509562 ABCB7O75027 752 aa20.36■□□□□ 0.85
ZFYVE16-205ENST00000509562 FBLN2P98095 1184 aa20.35■□□□□ 0.85
ZFYVE16-205ENST00000509562 MKRN4PQ13434 485 aaPredicted RBP20.35■□□□□ 0.85
ZFYVE16-205ENST00000509562 DSG3P32926 999 aa20.32■□□□□ 0.84
ZFYVE16-205ENST00000509562 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
ZFYVE16-205ENST00000509562 ZBTB12Q9Y330 459 aaPredicted RBP20.26■□□□□ 0.83
ZFYVE16-205ENST00000509562 SPDYE4A6NLX3 237 aa20.13■□□□□ 0.81
ZFYVE16-205ENST00000509562 PROM2Q8N271 834 aa19.87■□□□□ 0.77
ZFYVE16-205ENST00000509562 OSCARQ8IYS5 282 aa19.77■□□□□ 0.76
ZFYVE16-205ENST00000509562 FBXO3Q9UK99 471 aa19.76■□□□□ 0.75
ZFYVE16-205ENST00000509562 SPDYE2BA6NHP3 402 aa19.75■□□□□ 0.75
ZFYVE16-205ENST00000509562 SPDYE6P0CI01 402 aa19.75■□□□□ 0.75
ZFYVE16-205ENST00000509562 SPDYE2Q495Y8 402 aa19.75■□□□□ 0.75
ZFYVE16-205ENST00000509562 ZNF692Q9BU19 519 aaPredicted RBP19.73■□□□□ 0.75
ZFYVE16-205ENST00000509562 SSUH2Q9Y2M2 353 aa19.63■□□□□ 0.73
ZFYVE16-205ENST00000509562 AMER1Q5JTC6 1135 aaPredicted RBP19.53■□□□□ 0.72
ZFYVE16-205ENST00000509562 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
ZFYVE16-205ENST00000509562 RTN4Q9NQC3 1192 aaKnown RBP19.45■□□□□ 0.7
ZFYVE16-205ENST00000509562 VASPP50552 380 aaPredicted RBP19.42■□□□□ 0.7
ZFYVE16-205ENST00000509562 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
ZFYVE16-205ENST00000509562 STAG3Q9UJ98 1225 aa19.33■□□□□ 0.68
ZFYVE16-205ENST00000509562 AKT1S1Q96B36 256 aa19.23■□□□□ 0.67
ZFYVE16-205ENST00000509562 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
ZFYVE16-205ENST00000509562 IFNLR1Q8IU57 520 aaPredicted RBP19.2■□□□□ 0.66
ZFYVE16-205ENST00000509562 MIER1Q8N108 512 aa19.06■□□□□ 0.64
ZFYVE16-205ENST00000509562 PLCD3Q8N3E9 789 aa19.06■□□□□ 0.64
ZFYVE16-205ENST00000509562 SPDYE1Q8NFV5 336 aaPredicted RBP19.06■□□□□ 0.64
ZFYVE16-205ENST00000509562 REM2Q8IYK8 340 aaPredicted RBP19.03■□□□□ 0.64
ZFYVE16-205ENST00000509562 KLHL34Q8N239 644 aa19.01■□□□□ 0.63
ZFYVE16-205ENST00000509562 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
ZFYVE16-205ENST00000509562 SPOCK2Q92563 424 aa18.92■□□□□ 0.62
ZFYVE16-205ENST00000509562 CLEC11AQ9Y240 323 aa18.92■□□□□ 0.62
ZFYVE16-205ENST00000509562 ZBTB47Q9UFB7 747 aaPredicted RBP18.85■□□□□ 0.61
ZFYVE16-205ENST00000509562 PRR29P0C7W0 189 aa18.84■□□□□ 0.61
ZFYVE16-205ENST00000509562 PITPNM1O00562 1244 aa18.77■□□□□ 0.6
ZFYVE16-205ENST00000509562 PKD2Q13563 968 aa18.73■□□□□ 0.59
ZFYVE16-205ENST00000509562 CREBZFQ9NS37 354 aa18.68■□□□□ 0.58
ZFYVE16-205ENST00000509562 MNX1P50219 401 aaPredicted RBP18.56■□□□□ 0.56
ZFYVE16-205ENST00000509562 ECM2O94769 699 aaPredicted RBP18.53■□□□□ 0.56
ZFYVE16-205ENST00000509562 CIZ1Q9ULV3 898 aaPredicted RBP18.52■□□□□ 0.56
ZFYVE16-205ENST00000509562 NUBP1P53384 320 aa18.51■□□□□ 0.55
ZFYVE16-205ENST00000509562 GSE1Q14687 1217 aa18.45■□□□□ 0.54
ZFYVE16-205ENST00000509562 ABCC9O60706 1549 aa18.44■□□□□ 0.54
ZFYVE16-205ENST00000509562 NPM1P06748 294 aaKnown RBP eCLIP18.42■□□□□ 0.54
ZFYVE16-205ENST00000509562 DCAF8L2P0C7V8 631 aa18.41■□□□□ 0.54
ZFYVE16-205ENST00000509562 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
ZFYVE16-205ENST00000509562 DCAF8Q5TAQ9 597 aa18.39■□□□□ 0.53
ZFYVE16-205ENST00000509562 CHADLQ6NUI6 762 aa18.39■□□□□ 0.53
ZFYVE16-205ENST00000509562 FXR2P51116 673 aaKnown RBP eCLIP18.38■□□□□ 0.53
ZFYVE16-205ENST00000509562 CHRDL2Q6WN34 429 aa18.36■□□□□ 0.53
ZFYVE16-205ENST00000509562 FAM212AQ96EL1 285 aa18.34■□□□□ 0.53
ZFYVE16-205ENST00000509562 RGL2O15211 777 aa18.32■□□□□ 0.52
ZFYVE16-205ENST00000509562 PRKAR2AP13861 404 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms