RNA–Protein interactions for RNA: ENST00000505881.5

CPNE4-205, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-205ENST00000505881 AEBP2Q6ZN18 517 aaPredicted RBP17.55■□□□□ 0.4
CPNE4-205ENST00000505881 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
CPNE4-205ENST00000505881 PHF23Q9BUL5 403 aaPredicted RBP15.21■□□□□ 0.03
CPNE4-205ENST00000505881 SENP3Q9H4L4 574 aaPredicted RBP14.86□□□□□ -0.03
CPNE4-205ENST00000505881 PLPPR3Q6T4P5 718 aa14.09□□□□□ -0.15
CPNE4-205ENST00000505881 FOXD1Q16676 465 aa13.77□□□□□ -0.21
CPNE4-205ENST00000505881 PPP6R1Q9UPN7 881 aa13.36□□□□□ -0.27
CPNE4-205ENST00000505881 ADRA2BP18089 450 aa13.35□□□□□ -0.27
CPNE4-205ENST00000505881 PIAS4Q8N2W9 510 aaPredicted RBP13.03□□□□□ -0.32
CPNE4-205ENST00000505881 MSH5O43196 834 aa12.64□□□□□ -0.39
CPNE4-205ENST00000505881 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
CPNE4-205ENST00000505881 KCNA4P22459 653 aa12.33□□□□□ -0.44
CPNE4-205ENST00000505881 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.45
CPNE4-205ENST00000505881 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
CPNE4-205ENST00000505881 MAPK8IP2Q13387 824 aaPredicted RBP12.06□□□□□ -0.48
CPNE4-205ENST00000505881 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
CPNE4-205ENST00000505881 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
CPNE4-205ENST00000505881 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
CPNE4-205ENST00000505881 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-205ENST00000505881 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
CPNE4-205ENST00000505881 HOXD11P31277 338 aaPredicted RBP11.7□□□□□ -0.54
CPNE4-205ENST00000505881 DNAJC5BQ9UF47 199 aa11.63□□□□□ -0.55
CPNE4-205ENST00000505881 EHMT2Q96KQ7 1210 aa11.6□□□□□ -0.55
CPNE4-205ENST00000505881 POTEDQ86YR6 584 aa11.53□□□□□ -0.56
CPNE4-205ENST00000505881 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
CPNE4-205ENST00000505881 ZBTB22O15209 634 aa11.36□□□□□ -0.59
CPNE4-205ENST00000505881 DCAF8L1A6NGE4 600 aa11.34□□□□□ -0.59
CPNE4-205ENST00000505881 FOXD4L1Q9NU39 408 aa11.31□□□□□ -0.6
CPNE4-205ENST00000505881 SLC4A2P04920 1241 aa11.28□□□□□ -0.6
CPNE4-205ENST00000505881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.13□□□□□ -0.63
CPNE4-205ENST00000505881 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
CPNE4-205ENST00000505881 U3KPZ7 1027 aaPredicted RBP11□□□□□ -0.65
CPNE4-205ENST00000505881 NISCHQ9Y2I1 1504 aa10.93□□□□□ -0.66
CPNE4-205ENST00000505881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.89□□□□□ -0.67
CPNE4-205ENST00000505881 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
CPNE4-205ENST00000505881 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
CPNE4-205ENST00000505881 SAMD1Q6SPF0 538 aaPredicted RBP10.86□□□□□ -0.67
CPNE4-205ENST00000505881 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
CPNE4-205ENST00000505881 ABCC9O60706 1549 aa10.78□□□□□ -0.68
CPNE4-205ENST00000505881 ATF5Q9Y2D1 282 aaPredicted RBP10.76□□□□□ -0.69
CPNE4-205ENST00000505881 APLP2Q06481 763 aa10.74□□□□□ -0.69
CPNE4-205ENST00000505881 C1QBPQ07021 282 aaKnown RBP10.72□□□□□ -0.69
CPNE4-205ENST00000505881 SPINK5Q9NQ38 1064 aaPredicted RBP10.63□□□□□ -0.71
CPNE4-205ENST00000505881 ZNF219Q9P2Y4 722 aaPredicted RBP10.58□□□□□ -0.72
CPNE4-205ENST00000505881 CAPN15O75808 1086 aa10.57□□□□□ -0.72
CPNE4-205ENST00000505881 TRHP20396 242 aaPredicted RBP10.55□□□□□ -0.72
CPNE4-205ENST00000505881 CACNB1Q02641 598 aaPredicted RBP10.44□□□□□ -0.74
CPNE4-205ENST00000505881 POLA2Q14181 598 aa10.42□□□□□ -0.74
CPNE4-205ENST00000505881 ABCB7O75027 752 aa10.39□□□□□ -0.75
CPNE4-205ENST00000505881 DSG3P32926 999 aa10.37□□□□□ -0.75
CPNE4-205ENST00000505881 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
CPNE4-205ENST00000505881 FKBP8Q14318 412 aa10.29□□□□□ -0.76
CPNE4-205ENST00000505881 FBLN2P98095 1184 aa10.28□□□□□ -0.76
CPNE4-205ENST00000505881 ZBTB12Q9Y330 459 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-205ENST00000505881 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
CPNE4-205ENST00000505881 SPDYE4A6NLX3 237 aa10.14□□□□□ -0.79
CPNE4-205ENST00000505881 CCDC180Q9P1Z9 1646 aa10.1□□□□□ -0.79
CPNE4-205ENST00000505881 OSCARQ8IYS5 282 aa10.08□□□□□ -0.8
CPNE4-205ENST00000505881 PROM2Q8N271 834 aa10.02□□□□□ -0.81
CPNE4-205ENST00000505881 SPDYE2BA6NHP3 402 aa10.01□□□□□ -0.81
CPNE4-205ENST00000505881 SPDYE6P0CI01 402 aa10.01□□□□□ -0.81
CPNE4-205ENST00000505881 SPDYE2Q495Y8 402 aa10.01□□□□□ -0.81
CPNE4-205ENST00000505881 ZNF692Q9BU19 519 aaPredicted RBP9.97□□□□□ -0.81
CPNE4-205ENST00000505881 SSUH2Q9Y2M2 353 aa9.97□□□□□ -0.81
CPNE4-205ENST00000505881 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
CPNE4-205ENST00000505881 RB1CC1Q8TDY2 1594 aa9.93□□□□□ -0.82
CPNE4-205ENST00000505881 RBM42Q9BTD8 480 aaKnown RBP9.88□□□□□ -0.83
CPNE4-205ENST00000505881 FBXO3Q9UK99 471 aa9.88□□□□□ -0.83
CPNE4-205ENST00000505881 UNC13AQ9UPW8 1703 aa9.81□□□□□ -0.84
CPNE4-205ENST00000505881 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
CPNE4-205ENST00000505881 VASPP50552 380 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-205ENST00000505881 CECR2Q9BXF3 1484 aa9.75□□□□□ -0.85
CPNE4-205ENST00000505881 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
CPNE4-205ENST00000505881 CC2D2AQ9P2K1 1620 aa9.7□□□□□ -0.86
CPNE4-205ENST00000505881 REM2Q8IYK8 340 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-205ENST00000505881 NACADO15069 1562 aa9.68□□□□□ -0.86
CPNE4-205ENST00000505881 BICRAQ9NZM4 1560 aa9.68□□□□□ -0.86
CPNE4-205ENST00000505881 SPDYE1Q8NFV5 336 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-205ENST00000505881 AMER1Q5JTC6 1135 aaPredicted RBP9.65□□□□□ -0.86
CPNE4-205ENST00000505881 IFNLR1Q8IU57 520 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-205ENST00000505881 RTN4Q9NQC3 1192 aaKnown RBP9.63□□□□□ -0.87
CPNE4-205ENST00000505881 TRIM41Q8WV44 630 aa9.62□□□□□ -0.87
CPNE4-205ENST00000505881 DCAF8L2P0C7V8 631 aa9.61□□□□□ -0.87
CPNE4-205ENST00000505881 CLEC11AQ9Y240 323 aa9.61□□□□□ -0.87
CPNE4-205ENST00000505881 PITPNM1O00562 1244 aa9.59□□□□□ -0.87
CPNE4-205ENST00000505881 PLCD3Q8N3E9 789 aa9.59□□□□□ -0.87
CPNE4-205ENST00000505881 MIER1Q8N108 512 aa9.57□□□□□ -0.88
CPNE4-205ENST00000505881 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
CPNE4-205ENST00000505881 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
CPNE4-205ENST00000505881 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
CPNE4-205ENST00000505881 CUX2O14529 1486 aa9.49□□□□□ -0.89
CPNE4-205ENST00000505881 EIF4G1Q04637 1599 aaKnown RBP9.49□□□□□ -0.89
CPNE4-205ENST00000505881 SLC24A1O60721 1099 aa9.48□□□□□ -0.89
CPNE4-205ENST00000505881 SPOCK2Q92563 424 aa9.48□□□□□ -0.89
CPNE4-205ENST00000505881 ZBTB47Q9UFB7 747 aaPredicted RBP9.48□□□□□ -0.89
CPNE4-205ENST00000505881 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
CPNE4-205ENST00000505881 MNX1P50219 401 aaPredicted RBP9.41□□□□□ -0.9
CPNE4-205ENST00000505881 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
CPNE4-205ENST00000505881 SHROOM4Q9ULL8 1493 aa9.38□□□□□ -0.91
CPNE4-205ENST00000505881 FXR2P51116 673 aaKnown RBP eCLIP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms