RNA–Protein interactions for RNA: ENST00000498302.1

PCNX2-218, Transcript of pecanex 2, humanhuman

TSL 2

Gene PCNX2, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-218ENST00000498302 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
PCNX2-218ENST00000498302 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
PCNX2-218ENST00000498302 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
PCNX2-218ENST00000498302 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
PCNX2-218ENST00000498302 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
PCNX2-218ENST00000498302 FOXD1Q16676 465 aa19.11■□□□□ 0.65
PCNX2-218ENST00000498302 ADRA2BP18089 450 aa18.95■□□□□ 0.62
PCNX2-218ENST00000498302 PPP6R1Q9UPN7 881 aa18.92■□□□□ 0.62
PCNX2-218ENST00000498302 KCNA4P22459 653 aa18.28■□□□□ 0.52
PCNX2-218ENST00000498302 PIAS4Q8N2W9 510 aaPredicted RBP18.17■□□□□ 0.5
PCNX2-218ENST00000498302 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
PCNX2-218ENST00000498302 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
PCNX2-218ENST00000498302 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
PCNX2-218ENST00000498302 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
PCNX2-218ENST00000498302 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
PCNX2-218ENST00000498302 MSH5O43196 834 aa17.35■□□□□ 0.37
PCNX2-218ENST00000498302 SCAF1Q9H7N4 1312 aaKnown RBP17.31■□□□□ 0.36
PCNX2-218ENST00000498302 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
PCNX2-218ENST00000498302 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
PCNX2-218ENST00000498302 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
PCNX2-218ENST00000498302 ZBTB22O15209 634 aa16.83■□□□□ 0.28
PCNX2-218ENST00000498302 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
PCNX2-218ENST00000498302 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
PCNX2-218ENST00000498302 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
PCNX2-218ENST00000498302 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
PCNX2-218ENST00000498302 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
PCNX2-218ENST00000498302 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
PCNX2-218ENST00000498302 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
PCNX2-218ENST00000498302 ATXN8OSP0DMR3 200 aa16.01■□□□□ 0.15
PCNX2-218ENST00000498302 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
PCNX2-218ENST00000498302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.11
PCNX2-218ENST00000498302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
PCNX2-218ENST00000498302 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
PCNX2-218ENST00000498302 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
PCNX2-218ENST00000498302 FKBP8Q14318 412 aa15.58■□□□□ 0.08
PCNX2-218ENST00000498302 SAMD1Q6SPF0 538 aaPredicted RBP15.58■□□□□ 0.08
PCNX2-218ENST00000498302 U3KPZ7 1027 aaPredicted RBP15.58■□□□□ 0.08
PCNX2-218ENST00000498302 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
PCNX2-218ENST00000498302 RTN4Q9NQC3 1192 aaKnown RBP15.36■□□□□ 0.05
PCNX2-218ENST00000498302 NISCHQ9Y2I1 1504 aa15.31■□□□□ 0.04
PCNX2-218ENST00000498302 APLP2Q06481 763 aa15.29■□□□□ 0.04
PCNX2-218ENST00000498302 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
PCNX2-218ENST00000498302 SLC24A1O60721 1099 aa14.97□□□□□ -0.01
PCNX2-218ENST00000498302 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
PCNX2-218ENST00000498302 MKRN4PQ13434 485 aaPredicted RBP14.94□□□□□ -0.02
PCNX2-218ENST00000498302 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
PCNX2-218ENST00000498302 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
PCNX2-218ENST00000498302 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
PCNX2-218ENST00000498302 FBLN2P98095 1184 aa14.89□□□□□ -0.03
PCNX2-218ENST00000498302 CAPN15O75808 1086 aa14.84□□□□□ -0.03
PCNX2-218ENST00000498302 POLA2Q14181 598 aa14.84□□□□□ -0.03
PCNX2-218ENST00000498302 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
PCNX2-218ENST00000498302 PROM2Q8N271 834 aa14.8□□□□□ -0.04
PCNX2-218ENST00000498302 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
PCNX2-218ENST00000498302 ABCC9O60706 1549 aa14.67□□□□□ -0.06
PCNX2-218ENST00000498302 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
PCNX2-218ENST00000498302 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
PCNX2-218ENST00000498302 ABCB7O75027 752 aa14.62□□□□□ -0.07
PCNX2-218ENST00000498302 VASPP50552 380 aaPredicted RBP14.62□□□□□ -0.07
PCNX2-218ENST00000498302 IFNLR1Q8IU57 520 aaPredicted RBP14.48□□□□□ -0.09
PCNX2-218ENST00000498302 DSG3P32926 999 aa14.45□□□□□ -0.1
PCNX2-218ENST00000498302 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
PCNX2-218ENST00000498302 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
PCNX2-218ENST00000498302 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
PCNX2-218ENST00000498302 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
PCNX2-218ENST00000498302 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
PCNX2-218ENST00000498302 SSUH2Q9Y2M2 353 aa14.29□□□□□ -0.12
PCNX2-218ENST00000498302 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
PCNX2-218ENST00000498302 PKD2Q13563 968 aa14.26□□□□□ -0.13
PCNX2-218ENST00000498302 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
PCNX2-218ENST00000498302 SPOCK2Q92563 424 aa14.21□□□□□ -0.13
PCNX2-218ENST00000498302 PLCB2Q00722 1185 aa14.2□□□□□ -0.14
PCNX2-218ENST00000498302 PABPN1Q86U42 306 aaKnown RBP eCLIP14.2□□□□□ -0.14
PCNX2-218ENST00000498302 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
PCNX2-218ENST00000498302 PLCD3Q8N3E9 789 aa14.13□□□□□ -0.15
PCNX2-218ENST00000498302 MIER1Q8N108 512 aa14.08□□□□□ -0.16
PCNX2-218ENST00000498302 CACNB1Q02641 598 aaPredicted RBP14.06□□□□□ -0.16
PCNX2-218ENST00000498302 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
PCNX2-218ENST00000498302 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
PCNX2-218ENST00000498302 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
PCNX2-218ENST00000498302 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
PCNX2-218ENST00000498302 CCDC180Q9P1Z9 1646 aa13.92□□□□□ -0.18
PCNX2-218ENST00000498302 BBXQ8WY36 941 aaPredicted RBP13.91□□□□□ -0.18
PCNX2-218ENST00000498302 RGL2O15211 777 aa13.89□□□□□ -0.19
PCNX2-218ENST00000498302 NPM1P06748 294 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCNX2-218ENST00000498302 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
PCNX2-218ENST00000498302 CIZ1Q9ULV3 898 aaPredicted RBP13.85□□□□□ -0.19
PCNX2-218ENST00000498302 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
PCNX2-218ENST00000498302 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
PCNX2-218ENST00000498302 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
PCNX2-218ENST00000498302 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
PCNX2-218ENST00000498302 SPDYE1Q8NFV5 336 aaPredicted RBP13.74□□□□□ -0.21
PCNX2-218ENST00000498302 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
PCNX2-218ENST00000498302 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
PCNX2-218ENST00000498302 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
PCNX2-218ENST00000498302 CHGAP10645 457 aaKnown RBP13.69□□□□□ -0.22
PCNX2-218ENST00000498302 GSE1Q14687 1217 aa13.69□□□□□ -0.22
PCNX2-218ENST00000498302 NUBP1P53384 320 aa13.67□□□□□ -0.22
PCNX2-218ENST00000498302 SPRYD3Q8NCJ5 442 aa13.67□□□□□ -0.22
PCNX2-218ENST00000498302 BCANQ96GW7 911 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms